RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeastyeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAC7YNL054W RVB2Q12464 471 aaKnown RBP5.17□□□□□ -1.58
VAC7YNL054W RLF2Q12495 606 aa5.16□□□□□ -1.58
VAC7YNL054W ESC2Q06340 456 aa5.16□□□□□ -1.58
VAC7YNL054W MDG1P53885 366 aa5.16□□□□□ -1.58
VAC7YNL054W PCT1P13259 424 aa5.15□□□□□ -1.58
VAC7YNL054W SCC2Q04002 1493 aa5.15□□□□□ -1.58
VAC7YNL054W CKB1P43639 278 aa5.15□□□□□ -1.59
VAC7YNL054W BPT1P14772 1559 aa5.15□□□□□ -1.59
VAC7YNL054W KIP3P53086 805 aaKnown RBP5.14□□□□□ -1.59
VAC7YNL054W NST1P53935 1240 aa5.14□□□□□ -1.59
VAC7YNL054W CDC45Q08032 650 aa5.14□□□□□ -1.59
VAC7YNL054W MHP1P43638 1398 aa5.14□□□□□ -1.59
VAC7YNL054W TPM2P40414 161 aa5.14□□□□□ -1.59
VAC7YNL054W VPS27P40343 622 aaKnown RBP5.13□□□□□ -1.59
VAC7YNL054W YDL144CQ07589 356 aa5.13□□□□□ -1.59
VAC7YNL054W HSL1P34244 1518 aa5.13□□□□□ -1.59
VAC7YNL054W SPT2P06843 333 aaPredicted RBP5.13□□□□□ -1.59
VAC7YNL054W MFT1P33441 392 aaKnown RBP5.12□□□□□ -1.59
VAC7YNL054W DSN1P40568 576 aa5.12□□□□□ -1.59
VAC7YNL054W COG8Q04632 607 aa5.12□□□□□ -1.59
VAC7YNL054W SRB8P25648 1427 aa5.12□□□□□ -1.59
VAC7YNL054W TSC11P40061 1430 aa5.12□□□□□ -1.59
VAC7YNL054W NUG1P40010 520 aaKnown RBP5.11□□□□□ -1.59
VAC7YNL054W KRI1P42846 591 aaKnown RBP5.11□□□□□ -1.59
VAC7YNL054W MSP1P28737 362 aa5.11□□□□□ -1.59
VAC7YNL054W CLB1P24868 471 aa5.1□□□□□ -1.59
VAC7YNL054W REV3P14284 1504 aa5.1□□□□□ -1.59
VAC7YNL054W RIX1P38883 763 aaPredicted RBP5.1□□□□□ -1.59
VAC7YNL054W SMC3P47037 1230 aa5.1□□□□□ -1.59
VAC7YNL054W DIP2Q12220 943 aaPredicted RBP5.1□□□□□ -1.59
VAC7YNL054W PDR10P51533 1564 aa5.1□□□□□ -1.59
VAC7YNL054W RAD2P07276 1031 aa5.1□□□□□ -1.59
VAC7YNL054W TOP2P06786 1428 aaKnown RBP5.09□□□□□ -1.59
VAC7YNL054W GEA1P47102 1408 aaPredicted RBP5.09□□□□□ -1.59
VAC7YNL054W DAL5P15365 543 aa5.09□□□□□ -1.59
VAC7YNL054W TAF5P38129 798 aa5.09□□□□□ -1.59
VAC7YNL054W RSC1P53236 928 aa5.08□□□□□ -1.6
VAC7YNL054W NOP53Q12080 455 aaKnown RBP5.08□□□□□ -1.6
VAC7YNL054W HIR3P47171 1648 aa5.08□□□□□ -1.6
VAC7YNL054W MMS1Q06211 1407 aa5.08□□□□□ -1.6
VAC7YNL054W DEP1P31385 405 aa5.07□□□□□ -1.6
VAC7YNL054W BUD21Q08492 214 aaPredicted RBP5.07□□□□□ -1.6
VAC7YNL054W MIC60P36112 540 aa5.07□□□□□ -1.6
VAC7YNL054W PEP1P32319 1579 aa5.07□□□□□ -1.6
VAC7YNL054W ITC1P53125 1264 aa5.07□□□□□ -1.6
VAC7YNL054W NOT3P06102 836 aaKnown RBP5.06□□□□□ -1.6
VAC7YNL054W MPP10P47083 593 aaKnown RBP5.06□□□□□ -1.6
VAC7YNL054W KNS1P32350 737 aaPredicted RBP5.06□□□□□ -1.6
VAC7YNL054W PAP2P53632 584 aaKnown RBP5.06□□□□□ -1.6
VAC7YNL054W RPN7Q06103 429 aaKnown RBP5.06□□□□□ -1.6
VAC7YNL054W NMD2P38798 1089 aaKnown RBP5.06□□□□□ -1.6
VAC7YNL054W LCD1Q04377 747 aa5.06□□□□□ -1.6
VAC7YNL054W UTP13Q05946 817 aaKnown RBP5.06□□□□□ -1.6
VAC7YNL054W IRC20Q06554 1556 aa5.06□□□□□ -1.6
VAC7YNL054W SFI1Q12369 946 aa5.05□□□□□ -1.6
VAC7YNL054W ABP1P15891 592 aaKnown RBP5.04□□□□□ -1.6
VAC7YNL054W MSH4P40965 878 aaPredicted RBP5.04□□□□□ -1.6
VAC7YNL054W TEA1P47988 759 aa5.04□□□□□ -1.6
VAC7YNL054W PUF6Q04373 656 aaKnown RBP5.04□□□□□ -1.6
VAC7YNL054W POL1P13382 1468 aa5.04□□□□□ -1.6
VAC7YNL054W GDT1P38301 280 aaPredicted RBP5.04□□□□□ -1.6
VAC7YNL054W SUI2P20459 304 aaKnown RBP5.03□□□□□ -1.6
VAC7YNL054W SPC110P32380 944 aa5.03□□□□□ -1.6
VAC7YNL054W MSH3P25336 1018 aa5.03□□□□□ -1.6
VAC7YNL054W PRP3Q03338 469 aaPredicted RBP5.03□□□□□ -1.6
VAC7YNL054W MCM2P29469 868 aa5.03□□□□□ -1.6
VAC7YNL054W YIR014WP40570 242 aa5.02□□□□□ -1.61
VAC7YNL054W HOS3Q02959 697 aaKnown RBP5.02□□□□□ -1.61
VAC7YNL054W YLR419WQ06698 1435 aaKnown RBP5.02□□□□□ -1.61
VAC7YNL054W ARP5P53946 755 aa5.02□□□□□ -1.61
VAC7YNL054W SRS2P12954 1174 aa5.01□□□□□ -1.61
VAC7YNL054W EDE1P34216 1381 aa5.01□□□□□ -1.61
VAC7YNL054W LTV1P34078 463 aa5.01□□□□□ -1.61
VAC7YNL054W TCD1P38756 429 aa5.01□□□□□ -1.61
VAC7YNL054W VPS60Q03390 229 aa5.01□□□□□ -1.61
VAC7YNL054W SNQ2P32568 1501 aaKnown RBP5.01□□□□□ -1.61
VAC7YNL054W SLD2P34252 453 aa5□□□□□ -1.61
VAC7YNL054W CSE4P36012 229 aa5□□□□□ -1.61
VAC7YNL054W RPP0P05317 312 aaKnown RBP5□□□□□ -1.61
VAC7YNL054W IOC4Q04213 475 aa5□□□□□ -1.61
VAC7YNL054W DNF1P32660 1571 aa5□□□□□ -1.61
VAC7YNL054W RTG3P38165 486 aa5□□□□□ -1.61
VAC7YNL054W RTR1P40084 226 aaPredicted RBP5□□□□□ -1.61
VAC7YNL054W NNF2P53253 936 aa5□□□□□ -1.61
VAC7YNL054W RNT1Q02555 471 aa4.99□□□□□ -1.61
VAC7YNL054W TPD3P31383 635 aa4.99□□□□□ -1.61
VAC7YNL054W RIM101P33400 625 aa4.99□□□□□ -1.61
VAC7YNL054W RLP24Q07915 199 aaKnown RBP4.99□□□□□ -1.61
VAC7YNL054W POL32P47110 350 aa4.98□□□□□ -1.61
VAC7YNL054W CYC8P14922 966 aa4.98□□□□□ -1.61
VAC7YNL054W DID4P36108 232 aa4.98□□□□□ -1.61
VAC7YNL054W CBF5P33322 483 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
VAC7YNL054W OSW7P43611 510 aa4.98□□□□□ -1.61
VAC7YNL054W SES1P07284 462 aaKnown RBP4.97□□□□□ -1.61
VAC7YNL054W MNR2P35724 969 aa4.97□□□□□ -1.61
VAC7YNL054W PRP31P49704 494 aaPredicted RBP4.97□□□□□ -1.61
VAC7YNL054W VPS15P22219 1454 aa4.97□□□□□ -1.61
VAC7YNL054W TIM50Q02776 476 aa4.97□□□□□ -1.61
VAC7YNL054W JIP3O13555 125 aa4.96□□□□□ -1.61
VAC7YNL054W PSE1P32337 1089 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms