RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W ATF2P53296 535 aa10.01□□□□□ -0.81
HDA1YNL021W ATG32P40458 529 aa10□□□□□ -0.81
HDA1YNL021W EPS1P40557 701 aa10□□□□□ -0.81
HDA1YNL021W COX6P00427 148 aa10□□□□□ -0.81
HDA1YNL021W XRN1P22147 1528 aaKnown RBP9.99□□□□□ -0.81
HDA1YNL021W DNA2P38859 1522 aa9.99□□□□□ -0.81
HDA1YNL021W PAM1P37304 830 aaKnown RBP9.98□□□□□ -0.81
HDA1YNL021W VPS29P38759 282 aa9.98□□□□□ -0.81
HDA1YNL021W KOG1P38873 1557 aa9.96□□□□□ -0.81
HDA1YNL021W NOP7P53261 605 aaKnown RBP9.96□□□□□ -0.82
HDA1YNL021W EDS1P38073 919 aa9.95□□□□□ -0.82
HDA1YNL021W NOP53Q12080 455 aaKnown RBP9.95□□□□□ -0.82
HDA1YNL021W BRL1P38770 471 aa9.94□□□□□ -0.82
HDA1YNL021W BDF1P35817 686 aa9.93□□□□□ -0.82
HDA1YNL021W YJL007CP47080 104 aa9.93□□□□□ -0.82
HDA1YNL021W SEN54Q02825 467 aaPredicted RBP9.92□□□□□ -0.82
HDA1YNL021W ERG12P07277 443 aa9.91□□□□□ -0.82
HDA1YNL021W SSA4P22202 642 aaKnown RBP9.91□□□□□ -0.82
HDA1YNL021W SNU71P53207 620 aaKnown RBP9.89□□□□□ -0.83
HDA1YNL021W NOB1Q08444 459 aaKnown RBP9.89□□□□□ -0.83
HDA1YNL021W TIF1P10081 395 aaKnown RBP9.86□□□□□ -0.83
HDA1YNL021W CPS1P27614 576 aa9.86□□□□□ -0.83
HDA1YNL021W RRN6P32786 894 aa9.86□□□□□ -0.83
HDA1YNL021W YDR090CQ03193 310 aa9.86□□□□□ -0.83
HDA1YNL021W REV3P14284 1504 aa9.86□□□□□ -0.83
HDA1YNL021W MRPL32P25348 183 aa9.85□□□□□ -0.83
HDA1YNL021W KTR1P27810 393 aaKnown RBP9.85□□□□□ -0.83
HDA1YNL021W SSF1P38789 453 aaPredicted RBP9.85□□□□□ -0.83
HDA1YNL021W CSN12P47130 423 aa9.84□□□□□ -0.83
HDA1YNL021W SSA2P10592 639 aaKnown RBP9.83□□□□□ -0.84
HDA1YNL021W SLD2P34252 453 aa9.83□□□□□ -0.84
HDA1YNL021W TTI1P36097 1038 aa9.82□□□□□ -0.84
HDA1YNL021W MET10P39692 1035 aa9.82□□□□□ -0.84
HDA1YNL021W MIF2P35201 549 aa9.81□□□□□ -0.84
HDA1YNL021W SIN3P22579 1536 aa9.81□□□□□ -0.84
HDA1YNL021W STS1P38637 319 aa9.8□□□□□ -0.84
HDA1YNL021W THO2P53552 1597 aaKnown RBP9.79□□□□□ -0.84
HDA1YNL021W CDC3P32457 520 aaKnown RBP9.79□□□□□ -0.84
HDA1YNL021W UBP14P38237 781 aaKnown RBP9.77□□□□□ -0.84
HDA1YNL021W HEM3P28789 327 aa9.77□□□□□ -0.85
HDA1YNL021W BIO2P32451 375 aa9.77□□□□□ -0.85
HDA1YNL021W YML083CQ04526 418 aa9.76□□□□□ -0.85
HDA1YNL021W BUD4P47136 1447 aa9.75□□□□□ -0.85
HDA1YNL021W YTA7P40340 1379 aa9.75□□□□□ -0.85
HDA1YNL021W ECM5Q03214 1411 aa9.73□□□□□ -0.85
HDA1YNL021W RPL34AP87262 121 aaPredicted RBP9.73□□□□□ -0.85
HDA1YNL021W SSK2P53599 1579 aa9.73□□□□□ -0.85
HDA1YNL021W PTC3P34221 468 aaKnown RBP9.72□□□□□ -0.85
HDA1YNL021W OCA5P38738 679 aa9.72□□□□□ -0.85
HDA1YNL021W YPR204WQ08995 1032 aa9.72□□□□□ -0.85
HDA1YNL021W TAF2P23255 1407 aa9.71□□□□□ -0.85
HDA1YNL021W PUP1P25043 261 aa9.71□□□□□ -0.86
HDA1YNL021W VHR2P40041 505 aa9.71□□□□□ -0.86
HDA1YNL021W RTG2P32608 588 aaKnown RBP9.7□□□□□ -0.86
HDA1YNL021W TYW1Q08960 810 aaKnown RBP9.7□□□□□ -0.86
HDA1YNL021W HAT1Q12341 374 aa9.7□□□□□ -0.86
HDA1YNL021W PSE1P32337 1089 aaKnown RBP9.68□□□□□ -0.86
HDA1YNL021W YMR1P47147 688 aaKnown RBP RIP-Chip data9.68□□□□□ -0.86not detected
HDA1YNL021W RPL34BP40525 121 aaKnown RBP9.68□□□□□ -0.86
HDA1YNL021W YLR326WQ06170 240 aaKnown RBP9.68□□□□□ -0.86
HDA1YNL021W SPC42P36094 363 aa9.67□□□□□ -0.86
HDA1YNL021W ESP1Q03018 1630 aa9.66□□□□□ -0.86
HDA1YNL021W TOP1P04786 769 aa9.65□□□□□ -0.86
HDA1YNL021W ATG36P46983 293 aa9.65□□□□□ -0.86
HDA1YNL021W IPL1P38991 367 aa9.64□□□□□ -0.87
HDA1YNL021W YFR006WP43590 535 aa9.64□□□□□ -0.87
HDA1YNL021W ATG2P53855 1592 aa9.64□□□□□ -0.87
HDA1YNL021W YBL036CP38197 257 aa9.64□□□□□ -0.87
HDA1YNL021W ALD2P47771 506 aa9.64□□□□□ -0.87
HDA1YNL021W FAR11P53917 953 aa9.63□□□□□ -0.87
HDA1YNL021W YNL108CP53929 270 aa9.63□□□□□ -0.87
HDA1YNL021W DBP1P24784 617 aaKnown RBP9.62□□□□□ -0.87
HDA1YNL021W BRN1P38170 754 aa9.62□□□□□ -0.87
HDA1YNL021W DOS2P54858 310 aa9.62□□□□□ -0.87
HDA1YNL021W MYO2P19524 1574 aaKnown RBP9.62□□□□□ -0.87
HDA1YNL021W SUP45P12385 437 aaKnown RBP9.61□□□□□ -0.87
HDA1YNL021W RRP15Q06511 250 aaPredicted RBP9.6□□□□□ -0.87
HDA1YNL021W SKI3P17883 1432 aaKnown RBP9.59□□□□□ -0.87
HDA1YNL021W SCY1P53009 804 aa9.58□□□□□ -0.88
HDA1YNL021W LAM6Q08001 693 aa9.58□□□□□ -0.88
HDA1YNL021W MDS3P53094 1487 aa9.57□□□□□ -0.88
HDA1YNL021W PEP1P32319 1579 aa9.57□□□□□ -0.88
HDA1YNL021W PCS60P38137 543 aaKnown RBP RIP-Chip data9.57□□□□□ -0.88not detected
HDA1YNL021W MRX10Q05648 414 aa9.56□□□□□ -0.88
HDA1YNL021W ENO1P00924 437 aaKnown RBP9.56□□□□□ -0.88
HDA1YNL021W TEA1P47988 759 aa9.56□□□□□ -0.88
HDA1YNL021W ORC6P38826 435 aa9.55□□□□□ -0.88
HDA1YNL021W ITT1Q04638 464 aa9.55□□□□□ -0.88
HDA1YNL021W ALD4P46367 519 aaKnown RBP9.53□□□□□ -0.88
HDA1YNL021W ATE1P16639 503 aa9.53□□□□□ -0.88
HDA1YNL021W RAD59Q12223 238 aa9.53□□□□□ -0.88
HDA1YNL021W ENO2P00925 437 aaKnown RBP9.52□□□□□ -0.89
HDA1YNL021W YPK9Q12697 1472 aa9.52□□□□□ -0.89
HDA1YNL021W YDJ1P25491 409 aaKnown RBP9.51□□□□□ -0.89
HDA1YNL021W CSE4P36012 229 aa9.51□□□□□ -0.89
HDA1YNL021W TGL4P36165 910 aa9.51□□□□□ -0.89
HDA1YNL021W NIS1P53939 407 aa9.51□□□□□ -0.89
HDA1YNL021W PRY3P47033 881 aa9.5□□□□□ -0.89
HDA1YNL021W RGR1P19263 1082 aa9.49□□□□□ -0.89
HDA1YNL021W STM1P39015 273 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms