RNA–Protein interactions for RNA: YMR255W

GFD1, Transcript of Coiled-coiled protein of unknown function, yeastyeast

Gene GFD1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GFD1YMR255W BMT6Q12291 365 aa10.33□□□□□ -0.76
GFD1YMR255W YOL036WQ08206 761 aa10.32□□□□□ -0.76
GFD1YMR255W LEU3P08638 886 aa10.31□□□□□ -0.76
GFD1YMR255W GUT1P32190 709 aa10.3□□□□□ -0.76
GFD1YMR255W PBS2P08018 668 aa10.28□□□□□ -0.76
GFD1YMR255W DCW1P36091 449 aa10.28□□□□□ -0.76
GFD1YMR255W REF2P42073 533 aaPredicted RBP10.27□□□□□ -0.77
GFD1YMR255W MSB4Q12317 492 aa10.24□□□□□ -0.77
GFD1YMR255W VHR2P40041 505 aa10.22□□□□□ -0.77
GFD1YMR255W LEO1P38439 464 aa10.21□□□□□ -0.77
GFD1YMR255W SOL3P38858 249 aa10.21□□□□□ -0.77
GFD1YMR255W EAP1P36041 632 aaKnown RBP10.2□□□□□ -0.78
GFD1YMR255W DSF2P38213 736 aa10.2□□□□□ -0.78
GFD1YMR255W YGR273CP53329 174 aa10.19□□□□□ -0.78
GFD1YMR255W HTA1P04911 132 aaKnown RBP10.17□□□□□ -0.78
GFD1YMR255W HTA2P04912 132 aa10.17□□□□□ -0.78
GFD1YMR255W ABP1P15891 592 aaKnown RBP10.16□□□□□ -0.78
GFD1YMR255W UBP14P38237 781 aaKnown RBP10.16□□□□□ -0.78
GFD1YMR255W RTG1P32607 177 aa10.15□□□□□ -0.78
GFD1YMR255W YLR326WQ06170 240 aaKnown RBP10.14□□□□□ -0.79
GFD1YMR255W MAM3Q12296 706 aa10.14□□□□□ -0.79
GFD1YMR255W TRP5P00931 707 aaKnown RBP10.13□□□□□ -0.79
GFD1YMR255W NST1P53935 1240 aa10.12□□□□□ -0.79
GFD1YMR255W COX6P00427 148 aa10.11□□□□□ -0.79
GFD1YMR255W YDR090CQ03193 310 aa10.11□□□□□ -0.79
GFD1YMR255W NCR1Q12200 1170 aa10.11□□□□□ -0.79
GFD1YMR255W IES2P40154 320 aa10.1□□□□□ -0.79
GFD1YMR255W KEX1P09620 729 aa10.09□□□□□ -0.79
GFD1YMR255W YEL023CP39992 682 aa10.09□□□□□ -0.79
GFD1YMR255W MAK21Q12176 1025 aaKnown RBP10.09□□□□□ -0.79
GFD1YMR255W RPN1P38764 993 aaKnown RBP10.07□□□□□ -0.8
GFD1YMR255W PCS60P38137 543 aaKnown RBP RIP-Chip data10.05□□□□□ -0.8not detected
GFD1YMR255W ILV3P39522 585 aaKnown RBP10.05□□□□□ -0.8
GFD1YMR255W RAD54P32863 898 aa10.04□□□□□ -0.8
GFD1YMR255W SEC61P32915 480 aa10.04□□□□□ -0.8
GFD1YMR255W KIC1P38692 1080 aa10.04□□□□□ -0.8
GFD1YMR255W YNL035CP53962 389 aaKnown RBP10.04□□□□□ -0.8
GFD1YMR255W DIT2P21595 489 aa10.03□□□□□ -0.8
GFD1YMR255W MPH3P0CE00 602 aa10.02□□□□□ -0.81
GFD1YMR255W NUP42P49686 430 aaKnown RBP10.02□□□□□ -0.81
GFD1YMR255W AI4P03878 556 aa10.01□□□□□ -0.81
GFD1YMR255W PTC4P38089 393 aa10□□□□□ -0.81
GFD1YMR255W DAN4P47179 1161 aa9.98□□□□□ -0.81
GFD1YMR255W GLC3P32775 704 aa9.97□□□□□ -0.81
GFD1YMR255W YNR021WP53723 404 aaKnown RBP9.97□□□□□ -0.81
GFD1YMR255W JIP4Q03361 876 aa9.96□□□□□ -0.82
GFD1YMR255W SGS1P35187 1447 aa9.92□□□□□ -0.82
GFD1YMR255W SLI15P38283 698 aa9.92□□□□□ -0.82
GFD1YMR255W TFG1P41895 735 aaPredicted RBP9.89□□□□□ -0.83
GFD1YMR255W ORC6P38826 435 aa9.87□□□□□ -0.83
GFD1YMR255W MID1P41821 548 aa9.87□□□□□ -0.83
GFD1YMR255W PML39Q03760 334 aa9.87□□□□□ -0.83
GFD1YMR255W KIN1P13185 1064 aa9.86□□□□□ -0.83
GFD1YMR255W SAP30P38429 201 aa9.85□□□□□ -0.83
GFD1YMR255W ATF2P53296 535 aa9.85□□□□□ -0.83
GFD1YMR255W CDC73Q06697 393 aa9.84□□□□□ -0.83
GFD1YMR255W AIM7Q12156 149 aa9.83□□□□□ -0.84
GFD1YMR255W PSE1P32337 1089 aaKnown RBP9.82□□□□□ -0.84
GFD1YMR255W BCK2P33306 851 aa9.82□□□□□ -0.84
GFD1YMR255W YDL129WQ07555 291 aa9.8□□□□□ -0.84
GFD1YMR255W CHL1P22516 861 aaPredicted RBP9.78□□□□□ -0.84
GFD1YMR255W RGR1P19263 1082 aa9.77□□□□□ -0.85
GFD1YMR255W MVP1P40959 511 aaKnown RBP9.76□□□□□ -0.85
GFD1YMR255W RPP1BP10622 106 aaKnown RBP9.75□□□□□ -0.85
GFD1YMR255W PEX29Q03370 554 aa9.75□□□□□ -0.85
GFD1YMR255W MPC54Q08550 464 aa9.75□□□□□ -0.85
GFD1YMR255W GAP1P19145 602 aaPredicted RBP9.74□□□□□ -0.85
GFD1YMR255W DMA2P53924 522 aa9.74□□□□□ -0.85
GFD1YMR255W DPL1Q05567 589 aa9.74□□□□□ -0.85
GFD1YMR255W PRE3P38624 215 aa9.73□□□□□ -0.85
GFD1YMR255W CSC1Q06538 782 aa9.73□□□□□ -0.85
GFD1YMR255W TEA1P47988 759 aa9.7□□□□□ -0.86
GFD1YMR255W PEX21P50091 288 aa9.7□□□□□ -0.86
GFD1YMR255W YPR109WQ06104 294 aa9.69□□□□□ -0.86
GFD1YMR255W INO80P53115 1489 aa9.68□□□□□ -0.86
GFD1YMR255W GUA1P38625 525 aaKnown RBP9.68□□□□□ -0.86
GFD1YMR255W NMA111P53920 997 aa9.67□□□□□ -0.86
GFD1YMR255W TUM1Q08686 304 aaKnown RBP9.67□□□□□ -0.86
GFD1YMR255W TFB4Q12004 338 aa9.66□□□□□ -0.86
GFD1YMR255W TAF7Q05021 590 aa9.65□□□□□ -0.86
GFD1YMR255W YDR344CQ05510 147 aa9.65□□□□□ -0.86
GFD1YMR255W YRR1Q12172 810 aa9.64□□□□□ -0.87
GFD1YMR255W ISU2Q12056 156 aa9.63□□□□□ -0.87
GFD1YMR255W CLB5P30283 435 aa9.62□□□□□ -0.87
GFD1YMR255W NIS1P53939 407 aa9.6□□□□□ -0.87
GFD1YMR255W SPA2P23201 1466 aaKnown RBP9.58□□□□□ -0.88
GFD1YMR255W CSN12P47130 423 aa9.57□□□□□ -0.88
GFD1YMR255W HAP5Q02516 242 aa9.57□□□□□ -0.88
GFD1YMR255W TYW1Q08960 810 aaKnown RBP9.57□□□□□ -0.88
GFD1YMR255W XDJ1P39102 459 aa9.56□□□□□ -0.88
GFD1YMR255W ARH1P48360 493 aa9.56□□□□□ -0.88
GFD1YMR255W PDR1P12383 1068 aa9.55□□□□□ -0.88
GFD1YMR255W FPK1P53739 893 aa9.55□□□□□ -0.88
GFD1YMR255W ELP4Q02884 456 aaKnown RBP9.55□□□□□ -0.88
GFD1YMR255W YMR196WQ04336 1088 aa9.55□□□□□ -0.88
GFD1YMR255W VRP1P37370 817 aa9.54□□□□□ -0.88
GFD1YMR255W SSN2P38931 1420 aa9.54□□□□□ -0.88
GFD1YMR255W KTR1P27810 393 aaKnown RBP9.53□□□□□ -0.88
GFD1YMR255W SCJ1P25303 377 aa9.52□□□□□ -0.89
GFD1YMR255W TCB3Q03640 1545 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms