RNA–Protein interactions for RNA: YMR199W

CLN1, Transcript of G1 cyclin involved in regulation of the cell cycle, yeastyeast

Gene CLN1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN1YMR199W YOL036WQ08206 761 aa8.69□□□□□ -1.02
CLN1YMR199W MNN4P36044 1178 aa8.68□□□□□ -1.02
CLN1YMR199W VMA1P17255 1071 aaKnown RBP8.66□□□□□ -1.02
CLN1YMR199W SET4P42948 560 aa8.66□□□□□ -1.02
CLN1YMR199W SEC3P33332 1336 aaKnown RBP8.66□□□□□ -1.02
CLN1YMR199W XRN1P22147 1528 aaKnown RBP8.65□□□□□ -1.02
CLN1YMR199W EAP1P36041 632 aaKnown RBP8.65□□□□□ -1.03
CLN1YMR199W YJL171CP46992 396 aa8.64□□□□□ -1.03
CLN1YMR199W SAM3Q08986 587 aa8.63□□□□□ -1.03
CLN1YMR199W SPT7P35177 1332 aa8.61□□□□□ -1.03
CLN1YMR199W TRP5P00931 707 aaKnown RBP8.61□□□□□ -1.03
CLN1YMR199W IKI3Q06706 1349 aaKnown RBP8.61□□□□□ -1.03
CLN1YMR199W CLC1P17891 233 aa8.6□□□□□ -1.03
CLN1YMR199W PRS1P32895 427 aaKnown RBP8.59□□□□□ -1.03
CLN1YMR199W TRM732Q03496 1420 aa8.58□□□□□ -1.04
CLN1YMR199W ECM5Q03214 1411 aa8.56□□□□□ -1.04
CLN1YMR199W RTG1P32607 177 aa8.55□□□□□ -1.04
CLN1YMR199W BMT6Q12291 365 aa8.54□□□□□ -1.04
CLN1YMR199W IME2P32581 645 aa8.53□□□□□ -1.04
CLN1YMR199W YNL035CP53962 389 aaKnown RBP8.51□□□□□ -1.05
CLN1YMR199W YFR016CP43597 1233 aaKnown RBP8.51□□□□□ -1.05
CLN1YMR199W MON2P48563 1636 aaPredicted RBP8.5□□□□□ -1.05
CLN1YMR199W NCR1Q12200 1170 aa8.5□□□□□ -1.05
CLN1YMR199W LEO1P38439 464 aa8.49□□□□□ -1.05
CLN1YMR199W QCR6P00127 147 aa8.48□□□□□ -1.05
CLN1YMR199W SEC61P32915 480 aa8.48□□□□□ -1.05
CLN1YMR199W GYP5Q12344 894 aa8.48□□□□□ -1.05
CLN1YMR199W ABP1P15891 592 aaKnown RBP8.46□□□□□ -1.06
CLN1YMR199W RPS0BP46654 252 aaKnown RBP8.46□□□□□ -1.06
CLN1YMR199W EAF7P53911 425 aaKnown RBP8.45□□□□□ -1.06
CLN1YMR199W SAS10Q12136 610 aaPredicted RBP8.45□□□□□ -1.06
CLN1YMR199W AIM44Q99299 758 aa8.44□□□□□ -1.06
CLN1YMR199W DAN4P47179 1161 aa8.43□□□□□ -1.06
CLN1YMR199W RAM2P29703 316 aa8.43□□□□□ -1.06
CLN1YMR199W DCW1P36091 449 aa8.41□□□□□ -1.06
CLN1YMR199W JIP4Q03361 876 aa8.41□□□□□ -1.06
CLN1YMR199W SSM4P40318 1319 aa8.41□□□□□ -1.06
CLN1YMR199W HTA1P04911 132 aaKnown RBP8.4□□□□□ -1.06
CLN1YMR199W HTA2P04912 132 aa8.4□□□□□ -1.06
CLN1YMR199W OPY1P38271 328 aa8.4□□□□□ -1.07
CLN1YMR199W MAK11P20484 414 aaKnown RBP8.39□□□□□ -1.07
CLN1YMR199W YTA7P40340 1379 aa8.38□□□□□ -1.07
CLN1YMR199W MYO2P19524 1574 aaKnown RBP8.38□□□□□ -1.07
CLN1YMR199W BUD4P47136 1447 aa8.38□□□□□ -1.07
CLN1YMR199W FPR3P38911 411 aaKnown RBP8.37□□□□□ -1.07
CLN1YMR199W RTT106P40161 455 aa8.36□□□□□ -1.07
CLN1YMR199W RLF2Q12495 606 aa8.36□□□□□ -1.07
CLN1YMR199W CFT1Q06632 1357 aaKnown RBP8.36□□□□□ -1.07
CLN1YMR199W NUP170P38181 1502 aa8.36□□□□□ -1.07
CLN1YMR199W RPC31P17890 251 aa8.36□□□□□ -1.07
CLN1YMR199W YEL023CP39992 682 aa8.36□□□□□ -1.07
CLN1YMR199W TFG1P41895 735 aaPredicted RBP8.36□□□□□ -1.07
CLN1YMR199W SRB8P25648 1427 aa8.35□□□□□ -1.07
CLN1YMR199W STU1P38198 1513 aa8.35□□□□□ -1.07
CLN1YMR199W PTC4P38089 393 aa8.35□□□□□ -1.07
CLN1YMR199W PEP1P32319 1579 aa8.35□□□□□ -1.07
CLN1YMR199W MIF2P35201 549 aa8.34□□□□□ -1.07
CLN1YMR199W EDS1P38073 919 aa8.34□□□□□ -1.07
CLN1YMR199W SNF7P39929 240 aaKnown RBP8.33□□□□□ -1.08
CLN1YMR199W GRE2Q12068 342 aaKnown RBP8.33□□□□□ -1.08
CLN1YMR199W SAP30P38429 201 aa8.32□□□□□ -1.08
CLN1YMR199W YGR130CP53278 816 aa8.32□□□□□ -1.08
CLN1YMR199W PTC3P34221 468 aaKnown RBP8.31□□□□□ -1.08
CLN1YMR199W CWC22P53333 577 aaKnown RBP8.31□□□□□ -1.08
CLN1YMR199W YDL129WQ07555 291 aa8.31□□□□□ -1.08
CLN1YMR199W TOP2P06786 1428 aaKnown RBP8.3□□□□□ -1.08
CLN1YMR199W LEU3P08638 886 aa8.3□□□□□ -1.08
CLN1YMR199W NOP53Q12080 455 aaKnown RBP8.3□□□□□ -1.08
CLN1YMR199W YLR419WQ06698 1435 aaKnown RBP8.3□□□□□ -1.08
CLN1YMR199W PDR10P51533 1564 aa8.3□□□□□ -1.08
CLN1YMR199W COQ8P27697 501 aa8.28□□□□□ -1.08
CLN1YMR199W HSL1P34244 1518 aa8.27□□□□□ -1.09
CLN1YMR199W GUT1P32190 709 aa8.26□□□□□ -1.09
CLN1YMR199W ATH1P48016 1211 aa8.26□□□□□ -1.09
CLN1YMR199W PAF1P38351 445 aa8.25□□□□□ -1.09
CLN1YMR199W PAN1P32521 1480 aa8.25□□□□□ -1.09
CLN1YMR199W THO2P53552 1597 aaKnown RBP8.25□□□□□ -1.09
CLN1YMR199W SPT6P23615 1451 aaKnown RBP8.25□□□□□ -1.09
CLN1YMR199W SMC4Q12267 1418 aa8.24□□□□□ -1.09
CLN1YMR199W POL1P13382 1468 aa8.23□□□□□ -1.09
CLN1YMR199W SCC2Q04002 1493 aa8.23□□□□□ -1.09
CLN1YMR199W ROX1P25042 368 aa8.23□□□□□ -1.09
CLN1YMR199W NUG1P40010 520 aaKnown RBP8.23□□□□□ -1.09
CLN1YMR199W TAF2P23255 1407 aa8.23□□□□□ -1.09
CLN1YMR199W RIX1P38883 763 aaPredicted RBP8.22□□□□□ -1.09
CLN1YMR199W NST1P53935 1240 aa8.22□□□□□ -1.09
CLN1YMR199W RNA1P11745 407 aaKnown RBP8.21□□□□□ -1.1
CLN1YMR199W CHL1P22516 861 aaPredicted RBP8.21□□□□□ -1.1
CLN1YMR199W REV3P14284 1504 aa8.21□□□□□ -1.1
CLN1YMR199W PRE3P38624 215 aa8.2□□□□□ -1.1
CLN1YMR199W SIN3P22579 1536 aa8.19□□□□□ -1.1
CLN1YMR199W SOL3P38858 249 aa8.19□□□□□ -1.1
CLN1YMR199W PML39Q03760 334 aa8.19□□□□□ -1.1
CLN1YMR199W BPT1P14772 1559 aa8.19□□□□□ -1.1
CLN1YMR199W MMS1Q06211 1407 aa8.19□□□□□ -1.1
CLN1YMR199W YIR014WP40570 242 aa8.18□□□□□ -1.1
CLN1YMR199W ENV11P53246 860 aa8.18□□□□□ -1.1
CLN1YMR199W DEF1P35732 738 aaKnown RBP8.18□□□□□ -1.1
CLN1YMR199W SSK2P53599 1579 aa8.17□□□□□ -1.1
CLN1YMR199W HIR3P47171 1648 aa8.17□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms