RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C TFG1P41895 735 aaPredicted RBP6.67□□□□□ -1.34
VTI1YMR197C GRE2Q12068 342 aaKnown RBP6.67□□□□□ -1.34
VTI1YMR197C YEL023CP39992 682 aa6.66□□□□□ -1.34
VTI1YMR197C EDS1P38073 919 aa6.65□□□□□ -1.34
VTI1YMR197C PTC3P34221 468 aaKnown RBP6.63□□□□□ -1.35
VTI1YMR197C PTC4P38089 393 aa6.63□□□□□ -1.35
VTI1YMR197C SAP30P38429 201 aa6.63□□□□□ -1.35
VTI1YMR197C COQ8P27697 501 aa6.62□□□□□ -1.35
VTI1YMR197C ATH1P48016 1211 aa6.61□□□□□ -1.35
VTI1YMR197C YDL129WQ07555 291 aa6.61□□□□□ -1.35
VTI1YMR197C GUT1P32190 709 aa6.59□□□□□ -1.35
VTI1YMR197C PML39Q03760 334 aa6.53□□□□□ -1.36
VTI1YMR197C NST1P53935 1240 aa6.51□□□□□ -1.37
VTI1YMR197C CHL1P22516 861 aaPredicted RBP6.5□□□□□ -1.37
VTI1YMR197C PRE3P38624 215 aa6.5□□□□□ -1.37
VTI1YMR197C SOL3P38858 249 aa6.5□□□□□ -1.37
VTI1YMR197C NOP53Q12080 455 aaKnown RBP6.48□□□□□ -1.37
VTI1YMR197C YDR344CQ05510 147 aa6.47□□□□□ -1.37
VTI1YMR197C AI4P03878 556 aa6.46□□□□□ -1.38
VTI1YMR197C MPH3P0CE00 602 aa6.45□□□□□ -1.38
VTI1YMR197C MID1P41821 548 aa6.45□□□□□ -1.38
VTI1YMR197C BCK2P33306 851 aa6.44□□□□□ -1.38
VTI1YMR197C ILV3P39522 585 aaKnown RBP6.43□□□□□ -1.38
VTI1YMR197C YGR273CP53329 174 aa6.43□□□□□ -1.38
VTI1YMR197C ELP4Q02884 456 aaKnown RBP6.43□□□□□ -1.38
VTI1YMR197C PEX29Q03370 554 aa6.41□□□□□ -1.38
VTI1YMR197C ARH1P48360 493 aa6.4□□□□□ -1.38
VTI1YMR197C SET1P38827 1080 aaKnown RBP6.39□□□□□ -1.39
VTI1YMR197C VRP1P37370 817 aa6.36□□□□□ -1.39
VTI1YMR197C SLI15P38283 698 aa6.33□□□□□ -1.4
VTI1YMR197C HAP5Q02516 242 aa6.33□□□□□ -1.4
VTI1YMR197C MPC54Q08550 464 aa6.33□□□□□ -1.4
VTI1YMR197C KEX1P09620 729 aa6.31□□□□□ -1.4
VTI1YMR197C SPT23P35210 1082 aa6.31□□□□□ -1.4
VTI1YMR197C XDJ1P39102 459 aa6.3□□□□□ -1.4
VTI1YMR197C RGA2Q06407 1009 aa6.29□□□□□ -1.4
VTI1YMR197C BNI4P53858 892 aa6.28□□□□□ -1.4
VTI1YMR197C VHR2P40041 505 aa6.27□□□□□ -1.41
VTI1YMR197C NMA111P53920 997 aa6.27□□□□□ -1.41
VTI1YMR197C DPL1Q05567 589 aa6.27□□□□□ -1.41
VTI1YMR197C YLR326WQ06170 240 aaKnown RBP6.27□□□□□ -1.41
VTI1YMR197C UBP14P38237 781 aaKnown RBP6.26□□□□□ -1.41
VTI1YMR197C PTC2P39966 464 aaKnown RBP6.25□□□□□ -1.41
VTI1YMR197C IFH1P39520 1085 aa6.23□□□□□ -1.41
VTI1YMR197C CDC73Q06697 393 aa6.23□□□□□ -1.41
VTI1YMR197C YML082WQ04533 649 aaKnown RBP6.22□□□□□ -1.41
VTI1YMR197C RAD54P32863 898 aa6.21□□□□□ -1.42
VTI1YMR197C PCS60P38137 543 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
VTI1YMR197C ISU2Q12056 156 aa6.2□□□□□ -1.42
VTI1YMR197C DPS1P04802 557 aaKnown RBP6.18□□□□□ -1.42
VTI1YMR197C YPR148CQ06523 435 aa6.17□□□□□ -1.42
VTI1YMR197C YDR090CQ03193 310 aa6.16□□□□□ -1.42
VTI1YMR197C YPR015CQ12531 247 aa6.16□□□□□ -1.42
VTI1YMR197C RPP1BP10622 106 aaKnown RBP6.14□□□□□ -1.43
VTI1YMR197C RAM1P22007 431 aa6.14□□□□□ -1.43
VTI1YMR197C KIC1P38692 1080 aa6.14□□□□□ -1.43
VTI1YMR197C REF2P42073 533 aaPredicted RBP6.13□□□□□ -1.43
VTI1YMR197C VPS70P47161 811 aa6.13□□□□□ -1.43
VTI1YMR197C PDR1P12383 1068 aa6.12□□□□□ -1.43
VTI1YMR197C GYP1Q08484 637 aa6.08□□□□□ -1.44
VTI1YMR197C PEX21P50091 288 aa6.07□□□□□ -1.44
VTI1YMR197C YRR1Q12172 810 aa6.06□□□□□ -1.44
VTI1YMR197C GAP1P19145 602 aaPredicted RBP6.05□□□□□ -1.44
VTI1YMR197C CSC1Q06538 782 aa6.05□□□□□ -1.44
VTI1YMR197C ORC6P38826 435 aa6.04□□□□□ -1.44
VTI1YMR197C MAK21Q12176 1025 aaKnown RBP6.04□□□□□ -1.44
VTI1YMR197C COX6P00427 148 aa6.03□□□□□ -1.44
VTI1YMR197C SRC1Q03707 834 aa6.03□□□□□ -1.44
VTI1YMR197C TUM1Q08686 304 aaKnown RBP6.03□□□□□ -1.44
VTI1YMR197C TFB4Q12004 338 aa6.03□□□□□ -1.44
VTI1YMR197C RAS1P01119 309 aa6.01□□□□□ -1.45
VTI1YMR197C SAS4Q04003 481 aa6.01□□□□□ -1.45
VTI1YMR197C NUD1P32336 851 aa5.99□□□□□ -1.45
VTI1YMR197C STR2P47164 639 aa5.99□□□□□ -1.45
VTI1YMR197C BUD20Q08004 166 aaPredicted RBP5.99□□□□□ -1.45
VTI1YMR197C SDH2P21801 266 aa5.98□□□□□ -1.45
VTI1YMR197C AMS1P22855 1083 aa5.98□□□□□ -1.45
VTI1YMR197C ISM1P48526 1002 aa5.98□□□□□ -1.45
VTI1YMR197C PRT1P06103 763 aaKnown RBP5.97□□□□□ -1.45
VTI1YMR197C DMA1P38823 416 aa5.97□□□□□ -1.45
VTI1YMR197C MVP1P40959 511 aaKnown RBP5.97□□□□□ -1.45
VTI1YMR197C CKB1P43639 278 aa5.97□□□□□ -1.45
VTI1YMR197C PBS2P08018 668 aa5.95□□□□□ -1.46
VTI1YMR197C NPL4P33755 580 aa5.95□□□□□ -1.46
VTI1YMR197C RGA1P39083 1007 aa5.95□□□□□ -1.46
VTI1YMR197C YEL077CQ3E7X8 1277 aa5.94□□□□□ -1.46
VTI1YMR197C RGR1P19263 1082 aa5.93□□□□□ -1.46
VTI1YMR197C MRF1P30775 413 aaPredicted RBP5.93□□□□□ -1.46
VTI1YMR197C YPR109WQ06104 294 aa5.92□□□□□ -1.46
VTI1YMR197C TY1A-DR4O74302 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-HP0C2I4 478 aaKnown RBP5.91□□□□□ -1.46
VTI1YMR197C TY1A-AP0CX57 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-PR1P0CX58 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-ORP0CX59 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-PR2P0CX60 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-DR5P0CX65 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-ER2P0CX66 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-GR3P0CX67 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-LR1P0CX68 440 aa5.91□□□□□ -1.46
VTI1YMR197C TY1A-MR2P0CX69 440 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms