RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W BNI1P41832 1953 aa12.49□□□□□ -0.41
NUP53YMR153W RPO21P04050 1733 aaKnown RBP12.49□□□□□ -0.41
NUP53YMR153W TSC11P40061 1430 aa12.47□□□□□ -0.41
NUP53YMR153W VPS15P22219 1454 aa12.44□□□□□ -0.42
NUP53YMR153W MYO4P32492 1471 aa12.4□□□□□ -0.42
NUP53YMR153W ITT1Q04638 464 aa12.38□□□□□ -0.43
NUP53YMR153W YTA7P40340 1379 aa12.37□□□□□ -0.43
NUP53YMR153W SNQ2P32568 1501 aaKnown RBP12.34□□□□□ -0.43
NUP53YMR153W DRS2P39524 1355 aa12.32□□□□□ -0.44
NUP53YMR153W MIF2P35201 549 aa12.31□□□□□ -0.44
NUP53YMR153W MMS1Q06211 1407 aa12.3□□□□□ -0.44
NUP53YMR153W SNT2P53127 1403 aa12.24□□□□□ -0.45
NUP53YMR153W MLP2P40457 1679 aa12.24□□□□□ -0.45
NUP53YMR153W NUP170P38181 1502 aa12.24□□□□□ -0.45
NUP53YMR153W STH1P32597 1359 aa12.24□□□□□ -0.45
NUP53YMR153W ULS1Q08562 1619 aa12.23□□□□□ -0.45
NUP53YMR153W ABP1P15891 592 aaKnown RBP12.22□□□□□ -0.45
NUP53YMR153W SPO14P36126 1683 aa12.22□□□□□ -0.45
NUP53YMR153W RTT106P40161 455 aa12.17□□□□□ -0.46
NUP53YMR153W MET10P39692 1035 aa12.16□□□□□ -0.46
NUP53YMR153W DNF2Q12675 1612 aa12.16□□□□□ -0.46
NUP53YMR153W IRC20Q06554 1556 aa12.15□□□□□ -0.46
NUP53YMR153W PDR12Q02785 1511 aa12.12□□□□□ -0.47
NUP53YMR153W PDR15Q04182 1529 aaKnown RBP12.12□□□□□ -0.47
NUP53YMR153W DOP1Q03921 1698 aa12.12□□□□□ -0.47
NUP53YMR153W GDB1Q06625 1536 aa12.09□□□□□ -0.47
NUP53YMR153W SAS10Q12136 610 aaPredicted RBP12.08□□□□□ -0.48
NUP53YMR153W IQG1Q12280 1495 aa12.03□□□□□ -0.48
NUP53YMR153W NUP157P40064 1391 aaKnown RBP12.03□□□□□ -0.48
NUP53YMR153W PDR10P51533 1564 aa12.02□□□□□ -0.49
NUP53YMR153W TRM3Q07527 1436 aa11.99□□□□□ -0.49
NUP53YMR153W BUD3P25558 1636 aa11.98□□□□□ -0.49
NUP53YMR153W TAF7Q05021 590 aa11.95□□□□□ -0.5
NUP53YMR153W IFH1P39520 1085 aa11.94□□□□□ -0.5
NUP53YMR153W CHC1P22137 1653 aaKnown RBP11.93□□□□□ -0.5
NUP53YMR153W YFR006WP43590 535 aa11.92□□□□□ -0.5
NUP53YMR153W YBT1P32386 1661 aa11.89□□□□□ -0.51
NUP53YMR153W YOR093CQ12275 1648 aa11.85□□□□□ -0.51
NUP53YMR153W ARO1P08566 1588 aaKnown RBP11.85□□□□□ -0.51
NUP53YMR153W GEA1P47102 1408 aaPredicted RBP11.85□□□□□ -0.51
NUP53YMR153W CAT8P39113 1433 aa11.82□□□□□ -0.52
NUP53YMR153W TY3B-GQ99315 1547 aa11.82□□□□□ -0.52
NUP53YMR153W SEC7P11075 2009 aaKnown RBP11.79□□□□□ -0.52
NUP53YMR153W CKB1P43639 278 aa11.74□□□□□ -0.53
NUP53YMR153W DNF3Q12674 1656 aa11.73□□□□□ -0.53
NUP53YMR153W BNR1P40450 1375 aa11.68□□□□□ -0.54
NUP53YMR153W YSP2Q06681 1438 aa11.68□□□□□ -0.54
NUP53YMR153W YAP3P38749 330 aa11.59□□□□□ -0.55
NUP53YMR153W SRB8P25648 1427 aa11.55□□□□□ -0.56
NUP53YMR153W USO1P25386 1790 aa11.53□□□□□ -0.56
NUP53YMR153W URN1Q06525 465 aaKnown RBP11.5□□□□□ -0.57
NUP53YMR153W MAK10Q02197 733 aa11.47□□□□□ -0.57
NUP53YMR153W NUP188P52593 1655 aaKnown RBP11.46□□□□□ -0.58
NUP53YMR153W BUD21Q08492 214 aaPredicted RBP11.44□□□□□ -0.58
NUP53YMR153W IML1P47170 1584 aa11.42□□□□□ -0.58
NUP53YMR153W VMR1P38735 1592 aa11.39□□□□□ -0.59
NUP53YMR153W IPL1P38991 367 aa11.35□□□□□ -0.59
NUP53YMR153W TY1B-NL2Q99337 1749 aaKnown RBP11.32□□□□□ -0.6
NUP53YMR153W HAP1P0CE41 1502 aa11.31□□□□□ -0.6
NUP53YMR153W TYS1P36421 394 aaKnown RBP11.31□□□□□ -0.6
NUP53YMR153W IKI3Q06706 1349 aaKnown RBP11.3□□□□□ -0.6
NUP53YMR153W PDR5P33302 1511 aaKnown RBP11.27□□□□□ -0.6
NUP53YMR153W GCN2P15442 1659 aa11.23□□□□□ -0.61
NUP53YMR153W SSM4P40318 1319 aa11.22□□□□□ -0.61
NUP53YMR153W THI12P42883 340 aa11.21□□□□□ -0.61
NUP53YMR153W THI5P43534 340 aa11.21□□□□□ -0.61
NUP53YMR153W THI11P47183 340 aa11.21□□□□□ -0.61
NUP53YMR153W YMR196WQ04336 1088 aa11.21□□□□□ -0.61
NUP53YMR153W THI13Q07748 340 aa11.21□□□□□ -0.61
NUP53YMR153W PDR11P40550 1411 aa11.13□□□□□ -0.63
NUP53YMR153W KRE5P22023 1365 aa11.07□□□□□ -0.64
NUP53YMR153W MRX12P47084 519 aa11.05□□□□□ -0.64
NUP53YMR153W RIA1P53893 1110 aa11.04□□□□□ -0.64
NUP53YMR153W NUP192P47054 1683 aa11.02□□□□□ -0.65
NUP53YMR153W PAF1P38351 445 aa11.01□□□□□ -0.65
NUP53YMR153W CFT1Q06632 1357 aaKnown RBP11.01□□□□□ -0.65
NUP53YMR153W BCK1Q01389 1478 aa11□□□□□ -0.65
NUP53YMR153W RAV1P47104 1357 aa10.98□□□□□ -0.65
NUP53YMR153W YNR029CP53729 429 aaKnown RBP10.95□□□□□ -0.66
NUP53YMR153W BFR2Q06631 534 aaKnown RBP10.92□□□□□ -0.66
NUP53YMR153W CAB1Q04430 367 aa10.92□□□□□ -0.66
NUP53YMR153W RAD9P14737 1309 aa10.91□□□□□ -0.66
NUP53YMR153W NOP7P53261 605 aaKnown RBP10.9□□□□□ -0.66
NUP53YMR153W YAH1Q12184 172 aaKnown RBP10.9□□□□□ -0.66
NUP53YMR153W RTC1Q08281 1341 aa10.89□□□□□ -0.67
NUP53YMR153W PTP3P40048 928 aa10.87□□□□□ -0.67
NUP53YMR153W ALD4P46367 519 aaKnown RBP10.87□□□□□ -0.67
NUP53YMR153W APP1P53933 587 aa10.87□□□□□ -0.67
NUP53YMR153W TY3B-IQ7LHG5 1498 aaKnown RBP10.85□□□□□ -0.67
NUP53YMR153W YRF1-2P40105 1681 aa10.79□□□□□ -0.68
NUP53YMR153W YIL055CP40523 627 aaKnown RBP10.79□□□□□ -0.68
NUP53YMR153W RRP5Q05022 1729 aaKnown RBP10.79□□□□□ -0.68
NUP53YMR153W REB1P21538 810 aa10.78□□□□□ -0.68
NUP53YMR153W GLN1P32288 370 aaKnown RBP10.78□□□□□ -0.68
NUP53YMR153W NAP1P25293 417 aaKnown RBP10.77□□□□□ -0.68
NUP53YMR153W TAF5P38129 798 aa10.75□□□□□ -0.69
NUP53YMR153W ENT1Q12518 454 aa10.75□□□□□ -0.69
NUP53YMR153W TY4B-HP0C2J7 1802 aa10.75□□□□□ -0.69
NUP53YMR153W TY4B-JP47024 1803 aa10.75□□□□□ -0.69
NUP53YMR153W TAF8Q03750 510 aa10.73□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 153.6 ms