RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W TY2B-OR1Q12113 1770 aa5.31□□□□□ -1.56
ECM16YMR128W TY2B-DR1Q12472 1770 aa5.31□□□□□ -1.56
ECM16YMR128W TY2B-OR2Q12501 1770 aa5.31□□□□□ -1.56
ECM16YMR128W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
ECM16YMR128W SNQ2P32568 1501 aaKnown RBP5.31□□□□□ -1.56
ECM16YMR128W MYO4P32492 1471 aa5.3□□□□□ -1.56
ECM16YMR128W MLP2P40457 1679 aa5.29□□□□□ -1.56
ECM16YMR128W STH1P32597 1359 aa5.28□□□□□ -1.56
ECM16YMR128W RPO31P04051 1460 aa5.28□□□□□ -1.56
ECM16YMR128W TY2B-BQ12491 1770 aa5.27□□□□□ -1.57
ECM16YMR128W SPP41P38904 1435 aa5.27□□□□□ -1.57
ECM16YMR128W PDR15Q04182 1529 aaKnown RBP5.27□□□□□ -1.57
ECM16YMR128W YCF1P39109 1515 aaKnown RBP5.27□□□□□ -1.57
ECM16YMR128W TOP2P06786 1428 aaKnown RBP5.26□□□□□ -1.57
ECM16YMR128W ULS1Q08562 1619 aa5.26□□□□□ -1.57
ECM16YMR128W IFH1P39520 1085 aa5.25□□□□□ -1.57
ECM16YMR128W MRPL32P25348 183 aa5.25□□□□□ -1.57
ECM16YMR128W SMC4Q12267 1418 aa5.25□□□□□ -1.57
ECM16YMR128W MDS3P53094 1487 aa5.25□□□□□ -1.57
ECM16YMR128W TY3B-GQ99315 1547 aa5.24□□□□□ -1.57
ECM16YMR128W KOG1P38873 1557 aa5.24□□□□□ -1.57
ECM16YMR128W SET1P38827 1080 aaKnown RBP5.24□□□□□ -1.57
ECM16YMR128W GEA1P47102 1408 aaPredicted RBP5.23□□□□□ -1.57
ECM16YMR128W MRM1P25270 412 aa5.23□□□□□ -1.57
ECM16YMR128W DMA2P53924 522 aa5.23□□□□□ -1.57
ECM16YMR128W EDS1P38073 919 aa5.22□□□□□ -1.57
ECM16YMR128W STS1P38637 319 aa5.22□□□□□ -1.57
ECM16YMR128W TSC11P40061 1430 aa5.21□□□□□ -1.57
ECM16YMR128W DSF2P38213 736 aa5.21□□□□□ -1.58
ECM16YMR128W RTT106P40161 455 aa5.21□□□□□ -1.58
ECM16YMR128W SPT7P35177 1332 aa5.21□□□□□ -1.58
ECM16YMR128W PDR10P51533 1564 aa5.21□□□□□ -1.58
ECM16YMR128W TY1B-HO13535 1793 aa5.21□□□□□ -1.58
ECM16YMR128W TY1B-DR5P0C2I2 1755 aa5.21□□□□□ -1.58
ECM16YMR128W TY1B-DR6P0C2I3 1755 aa5.21□□□□□ -1.58
ECM16YMR128W TY1B-LR2P0C2I5 1755 aa5.21□□□□□ -1.58
ECM16YMR128W TY1B-LR3P0C2I6 1755 aaKnown RBP5.21□□□□□ -1.58
ECM16YMR128W TY1B-PR1P0C2I9 1755 aaKnown RBP5.21□□□□□ -1.58
ECM16YMR128W TY1B-PR2P0C2J0 1756 aa5.21□□□□□ -1.58
ECM16YMR128W TY1B-PR3P0C2J1 1755 aaKnown RBP5.21□□□□□ -1.58
ECM16YMR128W TY1B-JR1P47098 1755 aa5.21□□□□□ -1.58
ECM16YMR128W TY1B-ML2Q03434 1755 aaKnown RBP5.21□□□□□ -1.58
ECM16YMR128W TY1B-ER1Q03612 1755 aa5.21□□□□□ -1.58
ECM16YMR128W TY1B-ML1Q04711 1755 aaKnown RBP5.21□□□□□ -1.58
ECM16YMR128W TY1B-GR2Q12269 1755 aa5.21□□□□□ -1.58
ECM16YMR128W TY1B-OLQ12273 1755 aa5.21□□□□□ -1.58
ECM16YMR128W TY1B-PLQ12414 1755 aaKnown RBP5.21□□□□□ -1.58
ECM16YMR128W MAK11P20484 414 aaKnown RBP5.2□□□□□ -1.58
ECM16YMR128W MAP2P38174 421 aaKnown RBP5.19□□□□□ -1.58
ECM16YMR128W TY1B-BRQ12193 1756 aa5.18□□□□□ -1.58
ECM16YMR128W TY1B-GR3Q12316 1755 aa5.18□□□□□ -1.58
ECM16YMR128W TY1B-ORQ92393 1755 aa5.18□□□□□ -1.58
ECM16YMR128W PAN1P32521 1480 aa5.18□□□□□ -1.58
ECM16YMR128W NUP42P49686 430 aaKnown RBP5.18□□□□□ -1.58
ECM16YMR128W POL5P39985 1022 aaKnown RBP5.18□□□□□ -1.58
ECM16YMR128W ENP1P38333 483 aaKnown RBP5.17□□□□□ -1.58
ECM16YMR128W YBT1P32386 1661 aa5.16□□□□□ -1.58
ECM16YMR128W VPS15P22219 1454 aa5.15□□□□□ -1.58
ECM16YMR128W NST1P53935 1240 aa5.15□□□□□ -1.59
ECM16YMR128W TY1B-JR2P47100 1755 aaKnown RBP5.14□□□□□ -1.59
ECM16YMR128W TY1B-ER2Q03619 1755 aa5.14□□□□□ -1.59
ECM16YMR128W TY1B-MR1Q04214 1755 aa5.14□□□□□ -1.59
ECM16YMR128W TY1B-MR2Q04670 1755 aaKnown RBP5.14□□□□□ -1.59
ECM16YMR128W TY1B-LR1Q12088 1755 aaKnown RBP5.14□□□□□ -1.59
ECM16YMR128W TY1B-NL1Q12112 1755 aa5.14□□□□□ -1.59
ECM16YMR128W TY1B-GR1Q12141 1755 aa5.14□□□□□ -1.59
ECM16YMR128W TY1B-BLQ12490 1755 aa5.14□□□□□ -1.59
ECM16YMR128W DNF1P32660 1571 aa5.14□□□□□ -1.59
ECM16YMR128W YDR090CQ03193 310 aa5.13□□□□□ -1.59
ECM16YMR128W ESC1Q03661 1658 aaKnown RBP5.13□□□□□ -1.59
ECM16YMR128W SCY1P53009 804 aa5.13□□□□□ -1.59
ECM16YMR128W RTG3P38165 486 aa5.13□□□□□ -1.59
ECM16YMR128W VTH1P40438 1549 aa5.13□□□□□ -1.59
ECM16YMR128W VTH2P40890 1549 aa5.13□□□□□ -1.59
ECM16YMR128W COQ8P27697 501 aa5.12□□□□□ -1.59
ECM16YMR128W DIT2P21595 489 aa5.11□□□□□ -1.59
ECM16YMR128W PRS1P32895 427 aaKnown RBP5.11□□□□□ -1.59
ECM16YMR128W VPS70P47161 811 aa5.11□□□□□ -1.59
ECM16YMR128W RPN1P38764 993 aaKnown RBP5.11□□□□□ -1.59
ECM16YMR128W SNT2P53127 1403 aa5.1□□□□□ -1.59
ECM16YMR128W SOL3P38858 249 aa5.09□□□□□ -1.59
ECM16YMR128W GDB1Q06625 1536 aa5.09□□□□□ -1.59
ECM16YMR128W BBC1P47068 1157 aa5.09□□□□□ -1.6
ECM16YMR128W UBP14P38237 781 aaKnown RBP5.08□□□□□ -1.6
ECM16YMR128W UBP10P53874 792 aaPredicted RBP5.07□□□□□ -1.6
ECM16YMR128W HAA1Q12753 694 aaKnown RBP5.07□□□□□ -1.6
ECM16YMR128W CKB1P43639 278 aa5.06□□□□□ -1.6
ECM16YMR128W ARO1P08566 1588 aaKnown RBP5.06□□□□□ -1.6
ECM16YMR128W IRC20Q06554 1556 aa5.06□□□□□ -1.6
ECM16YMR128W ORC1P54784 914 aaPredicted RBP5.06□□□□□ -1.6
ECM16YMR128W CDC25P04821 1589 aa5.06□□□□□ -1.6
ECM16YMR128W PBS2P08018 668 aa5.05□□□□□ -1.6
ECM16YMR128W CFT1Q06632 1357 aaKnown RBP5.05□□□□□ -1.6
ECM16YMR128W GUA1P38625 525 aaKnown RBP5.05□□□□□ -1.6
ECM16YMR128W NUP159P40477 1460 aa5.04□□□□□ -1.6
ECM16YMR128W SEC3P33332 1336 aaKnown RBP5.04□□□□□ -1.6
ECM16YMR128W BUD3P25558 1636 aa5.03□□□□□ -1.6
ECM16YMR128W NOP53Q12080 455 aaKnown RBP5.03□□□□□ -1.6
ECM16YMR128W FUN12P39730 1002 aaKnown RBP5.02□□□□□ -1.61
ECM16YMR128W GCN2P15442 1659 aa5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms