RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C YEL023CP39992 682 aa10.78□□□□□ -0.68
VPS20YMR077C YDL129WQ07555 291 aa10.77□□□□□ -0.69
VPS20YMR077C GRE2Q12068 342 aaKnown RBP10.77□□□□□ -0.69
VPS20YMR077C RAM2P29703 316 aa10.74□□□□□ -0.69
VPS20YMR077C SAP30P38429 201 aa10.74□□□□□ -0.69
VPS20YMR077C MIF2P35201 549 aa10.73□□□□□ -0.69
VPS20YMR077C ATH1P48016 1211 aa10.68□□□□□ -0.7
VPS20YMR077C GUT1P32190 709 aa10.67□□□□□ -0.7
VPS20YMR077C CHL1P22516 861 aaPredicted RBP10.66□□□□□ -0.7
VPS20YMR077C PTC3P34221 468 aaKnown RBP10.66□□□□□ -0.7
VPS20YMR077C EDS1P38073 919 aa10.64□□□□□ -0.71
VPS20YMR077C PRE3P38624 215 aa10.62□□□□□ -0.71
VPS20YMR077C COQ8P27697 501 aa10.61□□□□□ -0.71
VPS20YMR077C BCK2P33306 851 aa10.57□□□□□ -0.72
VPS20YMR077C PML39Q03760 334 aa10.56□□□□□ -0.72
VPS20YMR077C NOP53Q12080 455 aaKnown RBP10.56□□□□□ -0.72
VPS20YMR077C NST1P53935 1240 aa10.49□□□□□ -0.73
VPS20YMR077C AI4P03878 556 aa10.46□□□□□ -0.73
VPS20YMR077C MPH3P0CE00 602 aa10.45□□□□□ -0.74
VPS20YMR077C SOL3P38858 249 aa10.45□□□□□ -0.74
VPS20YMR077C ELP4Q02884 456 aaKnown RBP10.45□□□□□ -0.74
VPS20YMR077C ARH1P48360 493 aa10.41□□□□□ -0.74
VPS20YMR077C MID1P41821 548 aa10.38□□□□□ -0.75
VPS20YMR077C YGR273CP53329 174 aa10.37□□□□□ -0.75
VPS20YMR077C PEX29Q03370 554 aa10.37□□□□□ -0.75
VPS20YMR077C VRP1P37370 817 aa10.36□□□□□ -0.75
VPS20YMR077C YDR344CQ05510 147 aa10.36□□□□□ -0.75
VPS20YMR077C XDJ1P39102 459 aa10.35□□□□□ -0.75
VPS20YMR077C SPT23P35210 1082 aa10.31□□□□□ -0.76
VPS20YMR077C ILV3P39522 585 aaKnown RBP10.29□□□□□ -0.76
VPS20YMR077C HAP5Q02516 242 aa10.27□□□□□ -0.77
VPS20YMR077C BNI4P53858 892 aa10.23□□□□□ -0.77
VPS20YMR077C SET1P38827 1080 aaKnown RBP10.21□□□□□ -0.77
VPS20YMR077C MPC54Q08550 464 aa10.21□□□□□ -0.77
VPS20YMR077C SLI15P38283 698 aa10.19□□□□□ -0.78
VPS20YMR077C YML082WQ04533 649 aaKnown RBP10.17□□□□□ -0.78
VPS20YMR077C PTC2P39966 464 aaKnown RBP10.16□□□□□ -0.78
VPS20YMR077C NMA111P53920 997 aa10.15□□□□□ -0.78
VPS20YMR077C DPL1Q05567 589 aa10.15□□□□□ -0.78
VPS20YMR077C KEX1P09620 729 aa10.14□□□□□ -0.79
VPS20YMR077C DPS1P04802 557 aaKnown RBP10.11□□□□□ -0.79
VPS20YMR077C IFH1P39520 1085 aa10.06□□□□□ -0.8
VPS20YMR077C ISU2Q12056 156 aa10.06□□□□□ -0.8
VPS20YMR077C UBP14P38237 781 aaKnown RBP10.05□□□□□ -0.8
VPS20YMR077C YLR326WQ06170 240 aaKnown RBP10.04□□□□□ -0.8
VPS20YMR077C VHR2P40041 505 aa10.01□□□□□ -0.81
VPS20YMR077C RPP1BP10622 106 aaKnown RBP10□□□□□ -0.81
VPS20YMR077C RAD54P32863 898 aa9.99□□□□□ -0.81
VPS20YMR077C CDC73Q06697 393 aa9.98□□□□□ -0.81
VPS20YMR077C PCS60P38137 543 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
VPS20YMR077C RAM1P22007 431 aa9.93□□□□□ -0.82
VPS20YMR077C YPR015CQ12531 247 aa9.91□□□□□ -0.82
VPS20YMR077C KIC1P38692 1080 aa9.89□□□□□ -0.83
VPS20YMR077C YPR148CQ06523 435 aa9.88□□□□□ -0.83
VPS20YMR077C YDR090CQ03193 310 aa9.86□□□□□ -0.83
VPS20YMR077C GYP1Q08484 637 aa9.86□□□□□ -0.83
VPS20YMR077C REF2P42073 533 aaPredicted RBP9.84□□□□□ -0.83
VPS20YMR077C SAS4Q04003 481 aa9.84□□□□□ -0.83
VPS20YMR077C PDR1P12383 1068 aa9.82□□□□□ -0.84
VPS20YMR077C PEX21P50091 288 aa9.8□□□□□ -0.84
VPS20YMR077C SRC1Q03707 834 aa9.8□□□□□ -0.84
VPS20YMR077C CSC1Q06538 782 aa9.78□□□□□ -0.84
VPS20YMR077C TFB4Q12004 338 aa9.77□□□□□ -0.85
VPS20YMR077C MAK21Q12176 1025 aaKnown RBP9.76□□□□□ -0.85
VPS20YMR077C RAS1P01119 309 aa9.75□□□□□ -0.85
VPS20YMR077C GAP1P19145 602 aaPredicted RBP9.75□□□□□ -0.85
VPS20YMR077C AMS1P22855 1083 aa9.75□□□□□ -0.85
VPS20YMR077C YRR1Q12172 810 aa9.74□□□□□ -0.85
VPS20YMR077C VPS70P47161 811 aa9.73□□□□□ -0.85
VPS20YMR077C MRF1P30775 413 aaPredicted RBP9.71□□□□□ -0.86
VPS20YMR077C COX6P00427 148 aa9.7□□□□□ -0.86
VPS20YMR077C YEL077CQ3E7X8 1277 aa9.69□□□□□ -0.86
VPS20YMR077C PRT1P06103 763 aaKnown RBP9.68□□□□□ -0.86
VPS20YMR077C TUM1Q08686 304 aaKnown RBP9.68□□□□□ -0.86
VPS20YMR077C ORC6P38826 435 aa9.67□□□□□ -0.86
VPS20YMR077C BUD20Q08004 166 aaPredicted RBP9.67□□□□□ -0.86
VPS20YMR077C SDH2P21801 266 aa9.65□□□□□ -0.86
VPS20YMR077C NUD1P32336 851 aa9.64□□□□□ -0.87
VPS20YMR077C NPL4P33755 580 aa9.63□□□□□ -0.87
VPS20YMR077C STR2P47164 639 aa9.63□□□□□ -0.87
VPS20YMR077C TRK1P12685 1235 aa9.62□□□□□ -0.87
VPS20YMR077C ISM1P48526 1002 aa9.61□□□□□ -0.87
VPS20YMR077C CKB1P43639 278 aa9.59□□□□□ -0.87
VPS20YMR077C MVP1P40959 511 aaKnown RBP9.58□□□□□ -0.88
VPS20YMR077C ERG12P07277 443 aa9.57□□□□□ -0.88
VPS20YMR077C RGR1P19263 1082 aa9.53□□□□□ -0.88
VPS20YMR077C GCD11P32481 527 aaKnown RBP9.53□□□□□ -0.88
VPS20YMR077C YPR109WQ06104 294 aa9.51□□□□□ -0.89
VPS20YMR077C SPT16P32558 1035 aaKnown RBP9.5□□□□□ -0.89
VPS20YMR077C PBS2P08018 668 aa9.49□□□□□ -0.89
VPS20YMR077C TY1A-DR4O74302 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-HP0C2I4 478 aaKnown RBP9.47□□□□□ -0.89
VPS20YMR077C TY1A-AP0CX57 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-PR1P0CX58 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-ORP0CX59 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-PR2P0CX60 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-DR5P0CX65 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-ER2P0CX66 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-GR3P0CX67 440 aa9.47□□□□□ -0.89
VPS20YMR077C TY1A-LR1P0CX68 440 aa9.47□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms