RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C DCW1P36091 449 aa5.5□□□□□ -1.53
SOK2YMR016C CHL1P22516 861 aaPredicted RBP5.49□□□□□ -1.53
SOK2YMR016C YEL023CP39992 682 aa5.49□□□□□ -1.53
SOK2YMR016C BCK2P33306 851 aa5.46□□□□□ -1.54
SOK2YMR016C GRE2Q12068 342 aaKnown RBP5.46□□□□□ -1.54
SOK2YMR016C PRE3P38624 215 aa5.45□□□□□ -1.54
SOK2YMR016C MAK11P20484 414 aaKnown RBP5.43□□□□□ -1.54
SOK2YMR016C MIF2P35201 549 aa5.41□□□□□ -1.54
SOK2YMR016C ATH1P48016 1211 aa5.41□□□□□ -1.54
SOK2YMR016C GUT1P32190 709 aa5.41□□□□□ -1.54
SOK2YMR016C PTC3P34221 468 aaKnown RBP5.38□□□□□ -1.55
SOK2YMR016C RAM2P29703 316 aa5.37□□□□□ -1.55
SOK2YMR016C PML39Q03760 334 aa5.37□□□□□ -1.55
SOK2YMR016C EDS1P38073 919 aa5.35□□□□□ -1.55
SOK2YMR016C ELP4Q02884 456 aaKnown RBP5.35□□□□□ -1.55
SOK2YMR016C COQ8P27697 501 aa5.34□□□□□ -1.56
SOK2YMR016C XDJ1P39102 459 aa5.34□□□□□ -1.56
SOK2YMR016C VRP1P37370 817 aa5.33□□□□□ -1.56
SOK2YMR016C NOP53Q12080 455 aaKnown RBP5.33□□□□□ -1.56
SOK2YMR016C ARH1P48360 493 aa5.32□□□□□ -1.56
SOK2YMR016C AI4P03878 556 aa5.3□□□□□ -1.56
SOK2YMR016C PEX29Q03370 554 aa5.3□□□□□ -1.56
SOK2YMR016C MPH3P0CE00 602 aa5.29□□□□□ -1.56
SOK2YMR016C NST1P53935 1240 aa5.29□□□□□ -1.56
SOK2YMR016C SPT23P35210 1082 aa5.28□□□□□ -1.56
SOK2YMR016C MID1P41821 548 aa5.27□□□□□ -1.57
SOK2YMR016C YDR344CQ05510 147 aa5.27□□□□□ -1.57
SOK2YMR016C SOL3P38858 249 aa5.26□□□□□ -1.57
SOK2YMR016C HAP5Q02516 242 aa5.24□□□□□ -1.57
SOK2YMR016C YGR273CP53329 174 aa5.23□□□□□ -1.57
SOK2YMR016C BNI4P53858 892 aa5.22□□□□□ -1.57
SOK2YMR016C DPS1P04802 557 aaKnown RBP5.22□□□□□ -1.57
SOK2YMR016C ILV3P39522 585 aaKnown RBP5.2□□□□□ -1.58
SOK2YMR016C PTC2P39966 464 aaKnown RBP5.19□□□□□ -1.58
SOK2YMR016C YML082WQ04533 649 aaKnown RBP5.19□□□□□ -1.58
SOK2YMR016C MPC54Q08550 464 aa5.19□□□□□ -1.58
SOK2YMR016C DPL1Q05567 589 aa5.15□□□□□ -1.58
SOK2YMR016C NMA111P53920 997 aa5.15□□□□□ -1.59
SOK2YMR016C SLI15P38283 698 aa5.14□□□□□ -1.59
SOK2YMR016C KEX1P09620 729 aa5.11□□□□□ -1.59
SOK2YMR016C ISU2Q12056 156 aa5.11□□□□□ -1.59
SOK2YMR016C SET1P38827 1080 aaKnown RBP5.08□□□□□ -1.6
SOK2YMR016C RPP1BP10622 106 aaKnown RBP5.08□□□□□ -1.6
SOK2YMR016C SRC1Q03707 834 aa5.04□□□□□ -1.6
SOK2YMR016C YLR326WQ06170 240 aaKnown RBP5.04□□□□□ -1.6
SOK2YMR016C GYP1Q08484 637 aa5.04□□□□□ -1.6
SOK2YMR016C RAM1P22007 431 aa5.03□□□□□ -1.6
SOK2YMR016C RAD54P32863 898 aa5.03□□□□□ -1.6
SOK2YMR016C UBP14P38237 781 aaKnown RBP5.03□□□□□ -1.6
SOK2YMR016C IFH1P39520 1085 aa5.03□□□□□ -1.6
SOK2YMR016C CDC73Q06697 393 aa5.03□□□□□ -1.6
SOK2YMR016C SAS4Q04003 481 aa5.02□□□□□ -1.61
SOK2YMR016C YPR015CQ12531 247 aa5.02□□□□□ -1.61
SOK2YMR016C VHR2P40041 505 aa5.02□□□□□ -1.61
SOK2YMR016C PCS60P38137 543 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
SOK2YMR016C AMS1P22855 1083 aa4.99□□□□□ -1.61
SOK2YMR016C RAS1P01119 309 aa4.99□□□□□ -1.61
SOK2YMR016C KIC1P38692 1080 aa4.98□□□□□ -1.61
SOK2YMR016C PDR1P12383 1068 aa4.97□□□□□ -1.61
SOK2YMR016C YEL077CQ3E7X8 1277 aa4.97□□□□□ -1.61
SOK2YMR016C MRF1P30775 413 aaPredicted RBP4.96□□□□□ -1.62
SOK2YMR016C TRK1P12685 1235 aa4.96□□□□□ -1.62
SOK2YMR016C PEX21P50091 288 aa4.96□□□□□ -1.62
SOK2YMR016C CSC1Q06538 782 aa4.93□□□□□ -1.62
SOK2YMR016C TFB4Q12004 338 aa4.93□□□□□ -1.62
SOK2YMR016C YDR090CQ03193 310 aa4.92□□□□□ -1.62
SOK2YMR016C PRT1P06103 763 aaKnown RBP4.91□□□□□ -1.62
SOK2YMR016C REF2P42073 533 aaPredicted RBP4.91□□□□□ -1.62
SOK2YMR016C YPR148CQ06523 435 aa4.91□□□□□ -1.62
SOK2YMR016C YRR1Q12172 810 aa4.91□□□□□ -1.62
SOK2YMR016C RGA1P39083 1007 aa4.9□□□□□ -1.62
SOK2YMR016C SDH2P21801 266 aa4.9□□□□□ -1.63
SOK2YMR016C GAP1P19145 602 aaPredicted RBP4.89□□□□□ -1.63
SOK2YMR016C BUD20Q08004 166 aaPredicted RBP4.89□□□□□ -1.63
SOK2YMR016C ERG12P07277 443 aa4.88□□□□□ -1.63
SOK2YMR016C NPL4P33755 580 aa4.88□□□□□ -1.63
SOK2YMR016C MAK21Q12176 1025 aaKnown RBP4.88□□□□□ -1.63
SOK2YMR016C RGA2Q06407 1009 aa4.87□□□□□ -1.63
SOK2YMR016C TUM1Q08686 304 aaKnown RBP4.87□□□□□ -1.63
SOK2YMR016C NUD1P32336 851 aa4.86□□□□□ -1.63
SOK2YMR016C STR2P47164 639 aa4.86□□□□□ -1.63
SOK2YMR016C ISM1P48526 1002 aa4.85□□□□□ -1.63
SOK2YMR016C ORC6P38826 435 aa4.84□□□□□ -1.63
SOK2YMR016C COX6P00427 148 aa4.84□□□□□ -1.64
SOK2YMR016C SPT16P32558 1035 aaKnown RBP4.83□□□□□ -1.64
SOK2YMR016C VPS70P47161 811 aa4.82□□□□□ -1.64
SOK2YMR016C GCD11P32481 527 aaKnown RBP4.82□□□□□ -1.64
SOK2YMR016C GCR2Q01722 534 aa4.82□□□□□ -1.64
SOK2YMR016C PAT1P25644 796 aaKnown RBP4.8□□□□□ -1.64
SOK2YMR016C MVP1P40959 511 aaKnown RBP4.8□□□□□ -1.64
SOK2YMR016C BRE2P43132 505 aa4.79□□□□□ -1.64
SOK2YMR016C CST6P40535 587 aa4.77□□□□□ -1.65
SOK2YMR016C LAM6Q08001 693 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-DR4O74302 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-HP0C2I4 478 aaKnown RBP4.77□□□□□ -1.65
SOK2YMR016C TY1A-AP0CX57 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-PR1P0CX58 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-ORP0CX59 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-PR2P0CX60 440 aa4.77□□□□□ -1.65
SOK2YMR016C TY1A-DR5P0CX65 440 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms