RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C HTA1P04911 132 aaKnown RBP6.62□□□□□ -1.35
VPS9YML097C HTA2P04912 132 aa6.62□□□□□ -1.35
VPS9YML097C YEL023CP39992 682 aa6.6□□□□□ -1.35
VPS9YML097C RCR1P38212 213 aa6.59□□□□□ -1.35
VPS9YML097C PTC4P38089 393 aa6.57□□□□□ -1.36
VPS9YML097C SSP1P38871 571 aa6.57□□□□□ -1.36
VPS9YML097C YDR344CQ05510 147 aa6.57□□□□□ -1.36
VPS9YML097C ELP4Q02884 456 aaKnown RBP6.57□□□□□ -1.36
VPS9YML097C DPS1P04802 557 aaKnown RBP6.56□□□□□ -1.36
VPS9YML097C ABP1P15891 592 aaKnown RBP6.55□□□□□ -1.36
VPS9YML097C XDJ1P39102 459 aa6.55□□□□□ -1.36
VPS9YML097C PML39Q03760 334 aa6.53□□□□□ -1.36
VPS9YML097C TAF7Q05021 590 aa6.53□□□□□ -1.36
VPS9YML097C MGA2P40578 1113 aa6.5□□□□□ -1.37
VPS9YML097C MID1P41821 548 aa6.41□□□□□ -1.38
VPS9YML097C GRE2Q12068 342 aaKnown RBP6.41□□□□□ -1.38
VPS9YML097C PEX29Q03370 554 aa6.39□□□□□ -1.39
VPS9YML097C MIF2P35201 549 aa6.37□□□□□ -1.39
VPS9YML097C LEO1P38439 464 aa6.34□□□□□ -1.39
VPS9YML097C ATH1P48016 1211 aa6.34□□□□□ -1.39
VPS9YML097C ARH1P48360 493 aa6.34□□□□□ -1.39
VPS9YML097C RGA2Q06407 1009 aa6.34□□□□□ -1.39
VPS9YML097C SPT23P35210 1082 aa6.31□□□□□ -1.4
VPS9YML097C SRC1Q03707 834 aa6.31□□□□□ -1.4
VPS9YML097C GUT1P32190 709 aa6.26□□□□□ -1.41
VPS9YML097C RGA1P39083 1007 aa6.25□□□□□ -1.41
VPS9YML097C HAP5Q02516 242 aa6.25□□□□□ -1.41
VPS9YML097C PTC3P34221 468 aaKnown RBP6.24□□□□□ -1.41
VPS9YML097C PTC2P39966 464 aaKnown RBP6.24□□□□□ -1.41
VPS9YML097C EDS1P38073 919 aa6.22□□□□□ -1.41
VPS9YML097C RAS1P01119 309 aa6.18□□□□□ -1.42
VPS9YML097C SOL3P38858 249 aa6.18□□□□□ -1.42
VPS9YML097C BNI4P53858 892 aa6.17□□□□□ -1.42
VPS9YML097C SAS10Q12136 610 aaPredicted RBP6.17□□□□□ -1.42
VPS9YML097C NST1P53935 1240 aa6.16□□□□□ -1.42
VPS9YML097C LEU3P08638 886 aa6.15□□□□□ -1.43
VPS9YML097C MPH3P0CE00 602 aa6.15□□□□□ -1.43
VPS9YML097C MAK11P20484 414 aaKnown RBP6.15□□□□□ -1.43
VPS9YML097C ILV3P39522 585 aaKnown RBP6.14□□□□□ -1.43
VPS9YML097C MPC54Q08550 464 aa6.14□□□□□ -1.43
VPS9YML097C AI4P03878 556 aa6.13□□□□□ -1.43
VPS9YML097C YML082WQ04533 649 aaKnown RBP6.13□□□□□ -1.43
VPS9YML097C NMA111P53920 997 aa6.12□□□□□ -1.43
VPS9YML097C COQ8P27697 501 aa6.11□□□□□ -1.43
VPS9YML097C RAM2P29703 316 aa6.11□□□□□ -1.43
VPS9YML097C GYP1Q08484 637 aa6.07□□□□□ -1.44
VPS9YML097C YPR015CQ12531 247 aa6.05□□□□□ -1.44
VPS9YML097C TRK1P12685 1235 aa6.04□□□□□ -1.44
VPS9YML097C SLI15P38283 698 aa6.03□□□□□ -1.44
VPS9YML097C YGR273CP53329 174 aa6.03□□□□□ -1.44
VPS9YML097C DPL1Q05567 589 aa6.03□□□□□ -1.44
VPS9YML097C AMS1P22855 1083 aa5.99□□□□□ -1.45
VPS9YML097C SPB4P25808 606 aaPredicted RBP5.99□□□□□ -1.45
VPS9YML097C RPN1P38764 993 aaKnown RBP5.98□□□□□ -1.45
VPS9YML097C DMA2P53924 522 aa5.98□□□□□ -1.45
VPS9YML097C SET1P38827 1080 aaKnown RBP5.96□□□□□ -1.45
VPS9YML097C VPS70P47161 811 aa5.95□□□□□ -1.46
VPS9YML097C PDR1P12383 1068 aa5.93□□□□□ -1.46
VPS9YML097C RAM1P22007 431 aa5.93□□□□□ -1.46
VPS9YML097C ISU2Q12056 156 aa5.93□□□□□ -1.46
VPS9YML097C GBP2P25555 427 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
VPS9YML097C CDC73Q06697 393 aa5.92□□□□□ -1.46
VPS9YML097C GAR1P28007 205 aaKnown RBP5.91□□□□□ -1.46
VPS9YML097C CKB1P43639 278 aa5.89□□□□□ -1.47
VPS9YML097C YPL062WQ02781 134 aa5.89□□□□□ -1.47
VPS9YML097C SDH2P21801 266 aa5.88□□□□□ -1.47
VPS9YML097C YEL077CQ3E7X8 1277 aa5.87□□□□□ -1.47
VPS9YML097C KEX1P09620 729 aa5.86□□□□□ -1.47
VPS9YML097C YPR148CQ06523 435 aa5.85□□□□□ -1.47
VPS9YML097C IFH1P39520 1085 aa5.84□□□□□ -1.47
VPS9YML097C SAS4Q04003 481 aa5.83□□□□□ -1.48
VPS9YML097C PBS2P08018 668 aa5.8□□□□□ -1.48
VPS9YML097C MRF1P30775 413 aaPredicted RBP5.79□□□□□ -1.48
VPS9YML097C AIR1P40507 360 aaKnown RBP5.79□□□□□ -1.48
VPS9YML097C BRE2P43132 505 aa5.79□□□□□ -1.48
VPS9YML097C VHR2P40041 505 aa5.78□□□□□ -1.48
VPS9YML097C NOP53Q12080 455 aaKnown RBP5.78□□□□□ -1.48
VPS9YML097C ERG12P07277 443 aa5.76□□□□□ -1.49
VPS9YML097C DSF2P38213 736 aa5.76□□□□□ -1.49
VPS9YML097C GCR2Q01722 534 aa5.76□□□□□ -1.49
VPS9YML097C RLF2Q12495 606 aa5.76□□□□□ -1.49
VPS9YML097C KIN1P13185 1064 aa5.75□□□□□ -1.49
VPS9YML097C CLA4P48562 842 aa5.75□□□□□ -1.49
VPS9YML097C GLC3P32775 704 aa5.73□□□□□ -1.49
VPS9YML097C YLR326WQ06170 240 aaKnown RBP5.73□□□□□ -1.49
VPS9YML097C BUD20Q08004 166 aaPredicted RBP5.73□□□□□ -1.49
VPS9YML097C PRT1P06103 763 aaKnown RBP5.72□□□□□ -1.49
VPS9YML097C YRR1Q12172 810 aa5.72□□□□□ -1.49
VPS9YML097C MAM3Q12296 706 aa5.72□□□□□ -1.49
VPS9YML097C RAD54P32863 898 aa5.71□□□□□ -1.5
VPS9YML097C PCS60P38137 543 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
VPS9YML097C IES2P40154 320 aa5.71□□□□□ -1.5
VPS9YML097C PEX21P50091 288 aa5.71□□□□□ -1.5
VPS9YML097C YNR021WP53723 404 aaKnown RBP5.71□□□□□ -1.5
VPS9YML097C RPP1BP10622 106 aaKnown RBP5.7□□□□□ -1.5
VPS9YML097C CST6P40535 587 aa5.69□□□□□ -1.5
VPS9YML097C UBP14P38237 781 aaKnown RBP5.68□□□□□ -1.5
VPS9YML097C REF2P42073 533 aaPredicted RBP5.68□□□□□ -1.5
VPS9YML097C FRK1Q03002 865 aaPredicted RBP5.68□□□□□ -1.5
VPS9YML097C DIT2P21595 489 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms