RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A TY1B-GR1Q12141 1755 aa19.35■□□□□ 0.69
LSM3YLR438C-A TY1B-BLQ12490 1755 aa19.35■□□□□ 0.69
LSM3YLR438C-A SNT2P53127 1403 aa19.29■□□□□ 0.68
LSM3YLR438C-A NTE1Q04958 1679 aa19.27■□□□□ 0.67
LSM3YLR438C-A IFH1P39520 1085 aa19.26■□□□□ 0.67
LSM3YLR438C-A RPO21P04050 1733 aaKnown RBP19.21■□□□□ 0.67
LSM3YLR438C-A MLP2P40457 1679 aa19.2■□□□□ 0.66
LSM3YLR438C-A LTE1P07866 1435 aa19.2■□□□□ 0.66
LSM3YLR438C-A MET10P39692 1035 aa19.19■□□□□ 0.66
LSM3YLR438C-A PDR15Q04182 1529 aaKnown RBP19.19■□□□□ 0.66
LSM3YLR438C-A GEA2P39993 1459 aaKnown RBP19.13■□□□□ 0.65
LSM3YLR438C-A VPS15P22219 1454 aa19.12■□□□□ 0.65
LSM3YLR438C-A ULS1Q08562 1619 aa19.11■□□□□ 0.65
LSM3YLR438C-A YRF1-1P0CX20 1796 aa19.1■□□□□ 0.65
LSM3YLR438C-A YRF1-5P0CX21 1796 aa19.1■□□□□ 0.65
LSM3YLR438C-A YRF1-8P0CX22 1796 aa19.1■□□□□ 0.65
LSM3YLR438C-A GEA1P47102 1408 aaPredicted RBP19.04■□□□□ 0.64
LSM3YLR438C-A PDR12Q02785 1511 aa18.94■□□□□ 0.62
LSM3YLR438C-A DRS2P39524 1355 aa18.93■□□□□ 0.62
LSM3YLR438C-A NUP157P40064 1391 aaKnown RBP18.92■□□□□ 0.62
LSM3YLR438C-A ITT1Q04638 464 aa18.9■□□□□ 0.62
LSM3YLR438C-A IRC20Q06554 1556 aa18.89■□□□□ 0.62
LSM3YLR438C-A SPO14P36126 1683 aa18.88■□□□□ 0.61
LSM3YLR438C-A CAT8P39113 1433 aa18.86■□□□□ 0.61
LSM3YLR438C-A GDB1Q06625 1536 aa18.83■□□□□ 0.6
LSM3YLR438C-A NUP170P38181 1502 aa18.79■□□□□ 0.6
LSM3YLR438C-A PDR10P51533 1564 aa18.77■□□□□ 0.6
LSM3YLR438C-A CKB1P43639 278 aa18.77■□□□□ 0.6
LSM3YLR438C-A IQG1Q12280 1495 aa18.77■□□□□ 0.59
LSM3YLR438C-A TY3B-GQ99315 1547 aa18.74■□□□□ 0.59
LSM3YLR438C-A BNI1P41832 1953 aa18.72■□□□□ 0.59
LSM3YLR438C-A IKI3Q06706 1349 aaKnown RBP18.71■□□□□ 0.59
LSM3YLR438C-A BUD3P25558 1636 aa18.68■□□□□ 0.58
LSM3YLR438C-A MMS1Q06211 1407 aa18.67■□□□□ 0.58
LSM3YLR438C-A YBT1P32386 1661 aa18.64■□□□□ 0.57
LSM3YLR438C-A TRM3Q07527 1436 aa18.58■□□□□ 0.57
LSM3YLR438C-A ARO1P08566 1588 aaKnown RBP18.57■□□□□ 0.56
LSM3YLR438C-A SRB8P25648 1427 aa18.54■□□□□ 0.56
LSM3YLR438C-A YSP2Q06681 1438 aa18.51■□□□□ 0.55
LSM3YLR438C-A DOP1Q03921 1698 aa18.48■□□□□ 0.55
LSM3YLR438C-A BNR1P40450 1375 aa18.48■□□□□ 0.55
LSM3YLR438C-A BUD21Q08492 214 aaPredicted RBP18.47■□□□□ 0.55
LSM3YLR438C-A ABP1P15891 592 aaKnown RBP18.46■□□□□ 0.55
LSM3YLR438C-A SSM4P40318 1319 aa18.44■□□□□ 0.54
LSM3YLR438C-A SEC7P11075 2009 aaKnown RBP18.37■□□□□ 0.53
LSM3YLR438C-A CHC1P22137 1653 aaKnown RBP18.28■□□□□ 0.52
LSM3YLR438C-A DNF2Q12675 1612 aa18.27■□□□□ 0.52
LSM3YLR438C-A URN1Q06525 465 aaKnown RBP18.24■□□□□ 0.51
LSM3YLR438C-A MIF2P35201 549 aa18.17■□□□□ 0.5
LSM3YLR438C-A YAP3P38749 330 aa18.15■□□□□ 0.5
LSM3YLR438C-A YOR093CQ12275 1648 aa18.03■□□□□ 0.48
LSM3YLR438C-A IPL1P38991 367 aa18.01■□□□□ 0.47
LSM3YLR438C-A PAF1P38351 445 aa17.99■□□□□ 0.47
LSM3YLR438C-A GCN2P15442 1659 aa17.97■□□□□ 0.47
LSM3YLR438C-A NUP188P52593 1655 aaKnown RBP17.91■□□□□ 0.46
LSM3YLR438C-A TYS1P36421 394 aaKnown RBP17.91■□□□□ 0.46
LSM3YLR438C-A NOP7P53261 605 aaKnown RBP17.89■□□□□ 0.45
LSM3YLR438C-A IML1P47170 1584 aa17.85■□□□□ 0.45
LSM3YLR438C-A VMR1P38735 1592 aa17.84■□□□□ 0.45
LSM3YLR438C-A MAK10Q02197 733 aa17.84■□□□□ 0.45
LSM3YLR438C-A DNF3Q12674 1656 aa17.83■□□□□ 0.45
LSM3YLR438C-A PDR5P33302 1511 aaKnown RBP17.83■□□□□ 0.45
LSM3YLR438C-A BFR2Q06631 534 aaKnown RBP17.83■□□□□ 0.44
LSM3YLR438C-A PDR11P40550 1411 aa17.75■□□□□ 0.43
LSM3YLR438C-A RAV1P47104 1357 aa17.73■□□□□ 0.43
LSM3YLR438C-A HAP1P0CE41 1502 aa17.68■□□□□ 0.42
LSM3YLR438C-A RTC1Q08281 1341 aa17.68■□□□□ 0.42
LSM3YLR438C-A YFR006WP43590 535 aa17.62■□□□□ 0.41
LSM3YLR438C-A MRX12P47084 519 aa17.58■□□□□ 0.4
LSM3YLR438C-A ESL2P36168 1195 aa17.53■□□□□ 0.4
LSM3YLR438C-A TAF5P38129 798 aa17.51■□□□□ 0.39
LSM3YLR438C-A ALD4P46367 519 aaKnown RBP17.5■□□□□ 0.39
LSM3YLR438C-A YMR196WQ04336 1088 aa17.5■□□□□ 0.39
LSM3YLR438C-A RIA1P53893 1110 aa17.47■□□□□ 0.39
LSM3YLR438C-A CAB1Q04430 367 aa17.46■□□□□ 0.39
LSM3YLR438C-A KRE5P22023 1365 aa17.45■□□□□ 0.38
LSM3YLR438C-A NAP1P25293 417 aaKnown RBP17.45■□□□□ 0.38
LSM3YLR438C-A RAD9P14737 1309 aa17.44■□□□□ 0.38
LSM3YLR438C-A BCK1Q01389 1478 aa17.42■□□□□ 0.38
LSM3YLR438C-A TY1B-NL2Q99337 1749 aaKnown RBP17.38■□□□□ 0.37
LSM3YLR438C-A ORC1P54784 914 aaPredicted RBP17.36■□□□□ 0.37
LSM3YLR438C-A USO1P25386 1790 aa17.35■□□□□ 0.37
LSM3YLR438C-A THI12P42883 340 aa17.35■□□□□ 0.37
LSM3YLR438C-A THI5P43534 340 aa17.35■□□□□ 0.37
LSM3YLR438C-A THI11P47183 340 aa17.35■□□□□ 0.37
LSM3YLR438C-A TAF8Q03750 510 aa17.35■□□□□ 0.37
LSM3YLR438C-A THI13Q07748 340 aa17.35■□□□□ 0.37
LSM3YLR438C-A CFT1Q06632 1357 aaKnown RBP17.35■□□□□ 0.37
LSM3YLR438C-A NUP192P47054 1683 aa17.35■□□□□ 0.37
LSM3YLR438C-A POL5P39985 1022 aaKnown RBP17.33■□□□□ 0.36
LSM3YLR438C-A KIP3P53086 805 aaKnown RBP17.32■□□□□ 0.36
LSM3YLR438C-A YNR029CP53729 429 aaKnown RBP17.31■□□□□ 0.36
LSM3YLR438C-A SCT1P32784 759 aa17.29■□□□□ 0.36
LSM3YLR438C-A SPE2P21182 396 aa17.26■□□□□ 0.35
LSM3YLR438C-A TY3B-IQ7LHG5 1498 aaKnown RBP17.21■□□□□ 0.35
LSM3YLR438C-A RCM1P53972 490 aa17.13■□□□□ 0.33
LSM3YLR438C-A CHZ1P40019 153 aaPredicted RBP17.12■□□□□ 0.33
LSM3YLR438C-A YLR419WQ06698 1435 aaKnown RBP17.11■□□□□ 0.33
LSM3YLR438C-A CPS1P27614 576 aa17.06■□□□□ 0.32
LSM3YLR438C-A PPH3P32345 308 aa17.03■□□□□ 0.32
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms