RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C JIP4Q03361 876 aa8.92□□□□□ -0.98
RPN13YLR421C GRE2Q12068 342 aaKnown RBP8.91□□□□□ -0.98
RPN13YLR421C YEL023CP39992 682 aa8.9□□□□□ -0.98
RPN13YLR421C TFG1P41895 735 aaPredicted RBP8.9□□□□□ -0.98
RPN13YLR421C PTC3P34221 468 aaKnown RBP8.88□□□□□ -0.99
RPN13YLR421C COQ8P27697 501 aa8.87□□□□□ -0.99
RPN13YLR421C PTC4P38089 393 aa8.86□□□□□ -0.99
RPN13YLR421C ATH1P48016 1211 aa8.86□□□□□ -0.99
RPN13YLR421C SAP30P38429 201 aa8.85□□□□□ -0.99
RPN13YLR421C YDL129WQ07555 291 aa8.82□□□□□ -1
RPN13YLR421C GUT1P32190 709 aa8.81□□□□□ -1
RPN13YLR421C PML39Q03760 334 aa8.73□□□□□ -1.01
RPN13YLR421C SOL3P38858 249 aa8.72□□□□□ -1.01
RPN13YLR421C NST1P53935 1240 aa8.71□□□□□ -1.02
RPN13YLR421C CHL1P22516 861 aaPredicted RBP8.67□□□□□ -1.02
RPN13YLR421C PRE3P38624 215 aa8.67□□□□□ -1.02
RPN13YLR421C YDR344CQ05510 147 aa8.67□□□□□ -1.02
RPN13YLR421C NOP53Q12080 455 aaKnown RBP8.66□□□□□ -1.02
RPN13YLR421C MID1P41821 548 aa8.65□□□□□ -1.02
RPN13YLR421C MPH3P0CE00 602 aa8.63□□□□□ -1.03
RPN13YLR421C AI4P03878 556 aa8.62□□□□□ -1.03
RPN13YLR421C ILV3P39522 585 aaKnown RBP8.62□□□□□ -1.03
RPN13YLR421C YGR273CP53329 174 aa8.61□□□□□ -1.03
RPN13YLR421C ELP4Q02884 456 aaKnown RBP8.6□□□□□ -1.03
RPN13YLR421C BCK2P33306 851 aa8.59□□□□□ -1.03
RPN13YLR421C SET1P38827 1080 aaKnown RBP8.58□□□□□ -1.04
RPN13YLR421C PEX29Q03370 554 aa8.57□□□□□ -1.04
RPN13YLR421C ARH1P48360 493 aa8.53□□□□□ -1.04
RPN13YLR421C VRP1P37370 817 aa8.49□□□□□ -1.05
RPN13YLR421C SLI15P38283 698 aa8.48□□□□□ -1.05
RPN13YLR421C MPC54Q08550 464 aa8.47□□□□□ -1.05
RPN13YLR421C KEX1P09620 729 aa8.45□□□□□ -1.06
RPN13YLR421C HAP5Q02516 242 aa8.45□□□□□ -1.06
RPN13YLR421C SPT23P35210 1082 aa8.44□□□□□ -1.06
RPN13YLR421C VHR2P40041 505 aa8.42□□□□□ -1.06
RPN13YLR421C XDJ1P39102 459 aa8.4□□□□□ -1.06
RPN13YLR421C YLR326WQ06170 240 aaKnown RBP8.4□□□□□ -1.06
RPN13YLR421C UBP14P38237 781 aaKnown RBP8.39□□□□□ -1.07
RPN13YLR421C NMA111P53920 997 aa8.39□□□□□ -1.07
RPN13YLR421C DPL1Q05567 589 aa8.39□□□□□ -1.07
RPN13YLR421C BNI4P53858 892 aa8.38□□□□□ -1.07
RPN13YLR421C PTC2P39966 464 aaKnown RBP8.35□□□□□ -1.07
RPN13YLR421C CDC73Q06697 393 aa8.34□□□□□ -1.07
RPN13YLR421C PCS60P38137 543 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
RPN13YLR421C RAD54P32863 898 aa8.32□□□□□ -1.08
RPN13YLR421C IFH1P39520 1085 aa8.32□□□□□ -1.08
RPN13YLR421C YML082WQ04533 649 aaKnown RBP8.31□□□□□ -1.08
RPN13YLR421C ISU2Q12056 156 aa8.3□□□□□ -1.08
RPN13YLR421C YPR148CQ06523 435 aa8.27□□□□□ -1.09
RPN13YLR421C YDR090CQ03193 310 aa8.26□□□□□ -1.09
RPN13YLR421C DPS1P04802 557 aaKnown RBP8.25□□□□□ -1.09
RPN13YLR421C YPR015CQ12531 247 aa8.25□□□□□ -1.09
RPN13YLR421C VPS70P47161 811 aa8.24□□□□□ -1.09
RPN13YLR421C KIC1P38692 1080 aa8.23□□□□□ -1.09
RPN13YLR421C REF2P42073 533 aaPredicted RBP8.23□□□□□ -1.09
RPN13YLR421C RAM1P22007 431 aa8.22□□□□□ -1.09
RPN13YLR421C PDR1P12383 1068 aa8.21□□□□□ -1.1
RPN13YLR421C RPP1BP10622 106 aaKnown RBP8.2□□□□□ -1.1
RPN13YLR421C PEX21P50091 288 aa8.13□□□□□ -1.11
RPN13YLR421C GYP1Q08484 637 aa8.13□□□□□ -1.11
RPN13YLR421C YRR1Q12172 810 aa8.12□□□□□ -1.11
RPN13YLR421C COX6P00427 148 aa8.09□□□□□ -1.11
RPN13YLR421C GAP1P19145 602 aaPredicted RBP8.09□□□□□ -1.11
RPN13YLR421C ORC6P38826 435 aa8.08□□□□□ -1.12
RPN13YLR421C CSC1Q06538 782 aa8.08□□□□□ -1.12
RPN13YLR421C TUM1Q08686 304 aaKnown RBP8.07□□□□□ -1.12
RPN13YLR421C MAK21Q12176 1025 aaKnown RBP8.07□□□□□ -1.12
RPN13YLR421C RAS1P01119 309 aa8.06□□□□□ -1.12
RPN13YLR421C DMA1P38823 416 aa8.06□□□□□ -1.12
RPN13YLR421C TFB4Q12004 338 aa8.06□□□□□ -1.12
RPN13YLR421C BUD20Q08004 166 aaPredicted RBP8.03□□□□□ -1.12
RPN13YLR421C STR2P47164 639 aa8.02□□□□□ -1.13
RPN13YLR421C SRC1Q03707 834 aa8.02□□□□□ -1.13
RPN13YLR421C SAS4Q04003 481 aa8.02□□□□□ -1.13
RPN13YLR421C NUD1P32336 851 aa8.01□□□□□ -1.13
RPN13YLR421C ISM1P48526 1002 aa8.01□□□□□ -1.13
RPN13YLR421C PBS2P08018 668 aa8□□□□□ -1.13
RPN13YLR421C SDH2P21801 266 aa8□□□□□ -1.13
RPN13YLR421C MVP1P40959 511 aaKnown RBP8□□□□□ -1.13
RPN13YLR421C CKB1P43639 278 aa7.99□□□□□ -1.13
RPN13YLR421C PRT1P06103 763 aaKnown RBP7.98□□□□□ -1.13
RPN13YLR421C AMS1P22855 1083 aa7.98□□□□□ -1.13
RPN13YLR421C YPR109WQ06104 294 aa7.96□□□□□ -1.14
RPN13YLR421C RGR1P19263 1082 aa7.95□□□□□ -1.14
RPN13YLR421C NPL4P33755 580 aa7.95□□□□□ -1.14
RPN13YLR421C GCD11P32481 527 aaKnown RBP7.93□□□□□ -1.14
RPN13YLR421C MRF1P30775 413 aaPredicted RBP7.92□□□□□ -1.14
RPN13YLR421C YEL077CQ3E7X8 1277 aa7.92□□□□□ -1.14
RPN13YLR421C SAS10Q12136 610 aaPredicted RBP7.91□□□□□ -1.14
RPN13YLR421C TY1A-DR4O74302 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-HP0C2I4 478 aaKnown RBP7.9□□□□□ -1.14
RPN13YLR421C TY1A-AP0CX57 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-PR1P0CX58 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-ORP0CX59 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-PR2P0CX60 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-DR5P0CX65 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-ER2P0CX66 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-GR3P0CX67 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-LR1P0CX68 440 aa7.9□□□□□ -1.14
RPN13YLR421C TY1A-MR2P0CX69 440 aa7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms