RNA–Protein interactions for RNA: YLR264W

RPS28B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS28B, Length 204 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS28B	YLR264W	YTA7	P40340	1379 aa		3.93	□□□□□ -1.78
RPS28B	YLR264W	QCR6	P00127	147 aa		3.93	□□□□□ -1.78
RPS28B	YLR264W	TAF13	P11747	167 aa		3.93	□□□□□ -1.78
RPS28B	YLR264W	RIX1	P38883	763 aa	Predicted RBP	3.93	□□□□□ -1.78
RPS28B	YLR264W	YGR130C	P53278	816 aa		3.93	□□□□□ -1.78
RPS28B	YLR264W	YNL011C	P53980	444 aa		3.93	□□□□□ -1.78
RPS28B	YLR264W	NOP8	Q08287	484 aa	Predicted RBP	3.93	□□□□□ -1.78
RPS28B	YLR264W	INO80	P53115	1489 aa		3.92	□□□□□ -1.78
RPS28B	YLR264W	SSF1	P38789	453 aa	Predicted RBP	3.92	□□□□□ -1.78
RPS28B	YLR264W	PEA2	P40091	420 aa		3.92	□□□□□ -1.78
RPS28B	YLR264W	VPS4	P52917	437 aa		3.92	□□□□□ -1.78
RPS28B	YLR264W	FPR4	Q06205	392 aa	Predicted RBP	3.92	□□□□□ -1.78
RPS28B	YLR264W	ISW2	Q08773	1120 aa		3.92	□□□□□ -1.78
RPS28B	YLR264W	HSC82	P15108	705 aa	Known RBP	3.91	□□□□□ -1.78
RPS28B	YLR264W	CDC11	P32458	415 aa		3.91	□□□□□ -1.78
RPS28B	YLR264W	FUN12	P39730	1002 aa	Known RBP	3.91	□□□□□ -1.78
RPS28B	YLR264W	HOS4	P40480	1083 aa		3.91	□□□□□ -1.78
RPS28B	YLR264W	SEC20	P28791	383 aa		3.9	□□□□□ -1.79
RPS28B	YLR264W	SPC110	P32380	944 aa		3.9	□□□□□ -1.79
RPS28B	YLR264W	SPC42	P36094	363 aa		3.9	□□□□□ -1.79
RPS28B	YLR264W	NMD2	P38798	1089 aa	Known RBP	3.9	□□□□□ -1.79
RPS28B	YLR264W	SLX8	P40072	274 aa		3.9	□□□□□ -1.79
RPS28B	YLR264W	MEH1	Q02205	184 aa		3.9	□□□□□ -1.79
RPS28B	YLR264W	YSH1	Q06224	779 aa	Predicted RBP	3.9	□□□□□ -1.79
RPS28B	YLR264W	BRE1	Q07457	700 aa	Known RBP	3.9	□□□□□ -1.79
RPS28B	YLR264W	RAD2	P07276	1031 aa		3.89	□□□□□ -1.79
RPS28B	YLR264W	GAL11	P19659	1081 aa		3.89	□□□□□ -1.79
RPS28B	YLR264W	MET10	P39692	1035 aa		3.89	□□□□□ -1.79
RPS28B	YLR264W	PTP3	P40048	928 aa		3.89	□□□□□ -1.79
RPS28B	YLR264W	CFT2	Q12102	859 aa	Predicted RBP	3.89	□□□□□ -1.79
RPS28B	YLR264W	PSK2	Q08217	1101 aa		3.88	□□□□□ -1.79
RPS28B	YLR264W	PET111	P08468	800 aa		3.87	□□□□□ -1.79
RPS28B	YLR264W	MCM1	P11746	286 aa		3.87	□□□□□ -1.79
RPS28B	YLR264W	RPA135	P22138	1203 aa	Known RBP	3.87	□□□□□ -1.79
RPS28B	YLR264W	SPT21	P35209	758 aa		3.87	□□□□□ -1.79
RPS28B	YLR264W	YDR341C	Q05506	607 aa	Known RBP	3.87	□□□□□ -1.79
RPS28B	YLR264W	MPE1	P35728	441 aa	Known RBP	3.86	□□□□□ -1.79
RPS28B	YLR264W	MTR4	P47047	1073 aa	Known RBP	3.86	□□□□□ -1.79
RPS28B	YLR264W	DOS2	P54858	310 aa		3.86	□□□□□ -1.79
RPS28B	YLR264W	GIR2	Q03768	265 aa	Predicted RBP	3.86	□□□□□ -1.79
RPS28B	YLR264W	ETT1	Q08421	412 aa	Known RBP	3.86	□□□□□ -1.79
RPS28B	YLR264W	APL5	Q08951	932 aa	Known RBP	3.86	□□□□□ -1.79
RPS28B	YLR264W	RAD51	P25454	400 aa		3.85	□□□□□ -1.79
RPS28B	YLR264W	RPG1	P38249	964 aa	Known RBP	3.85	□□□□□ -1.79
RPS28B	YLR264W	CKB1	P43639	278 aa		3.85	□□□□□ -1.79
RPS28B	YLR264W	NST1	P53935	1240 aa		3.85	□□□□□ -1.79
RPS28B	YLR264W	RCF1	Q03713	159 aa		3.85	□□□□□ -1.79
RPS28B	YLR264W	TSR3	Q12094	313 aa	Known RBP	3.85	□□□□□ -1.79
RPS28B	YLR264W	DJP1	P40564	432 aa		3.84	□□□□□ -1.79
RPS28B	YLR264W	PKH1	Q03407	766 aa		3.84	□□□□□ -1.79
RPS28B	YLR264W	SSA4	P22202	642 aa	Known RBP	3.83	□□□□□ -1.8
RPS28B	YLR264W	ERP2	P39704	215 aa		3.83	□□□□□ -1.8
RPS28B	YLR264W	SEC9	P40357	651 aa		3.83	□□□□□ -1.8
RPS28B	YLR264W	NNF2	P53253	936 aa		3.83	□□□□□ -1.8
RPS28B	YLR264W	SYH1	Q02875	849 aa	Known RBP	3.83	□□□□□ -1.8
RPS28B	YLR264W	UBX5	Q06682	500 aa		3.83	□□□□□ -1.8
RPS28B	YLR264W	CLF1	Q12309	687 aa	Predicted RBP	3.83	□□□□□ -1.8
RPS28B	YLR264W	TY1B-A	O13527	1196 aa	Known RBP	3.82	□□□□□ -1.8
RPS28B	YLR264W	TOM20	P35180	183 aa		3.82	□□□□□ -1.8
RPS28B	YLR264W	BLI1	P35727	113 aa		3.82	□□□□□ -1.8
RPS28B	YLR264W	SAP190	P36123	1033 aa		3.82	□□□□□ -1.8
RPS28B	YLR264W	NPR3	P38742	1146 aa		3.82	□□□□□ -1.8
RPS28B	YLR264W	PMC1	P38929	1173 aa	Predicted RBP	3.82	□□□□□ -1.8
RPS28B	YLR264W	LEM3	P42838	414 aa		3.82	□□□□□ -1.8
RPS28B	YLR264W	TAF1	P46677	1066 aa		3.82	□□□□□ -1.8
RPS28B	YLR264W	GDE1	Q02979	1223 aa		3.82	□□□□□ -1.8
RPS28B	YLR264W	HEL2	Q05580	639 aa	Known RBP	3.82	□□□□□ -1.8
RPS28B	YLR264W	OPI1	P21957	404 aa		3.81	□□□□□ -1.8
RPS28B	YLR264W	PAM1	P37304	830 aa	Known RBP	3.81	□□□□□ -1.8
RPS28B	YLR264W	NOC2	P39744	710 aa	Known RBP	3.81	□□□□□ -1.8
RPS28B	YLR264W	SEC27	P41811	889 aa	Known RBP	3.81	□□□□□ -1.8
RPS28B	YLR264W	MRX12	P47084	519 aa		3.81	□□□□□ -1.8
RPS28B	YLR264W	PRP43	P53131	767 aa	Known RBP	3.81	□□□□□ -1.8
RPS28B	YLR264W	YGL081W	P53156	320 aa		3.81	□□□□□ -1.8
RPS28B	YLR264W	YLL054C	Q12244	843 aa		3.81	□□□□□ -1.8
RPS28B	YLR264W	NMD3	P38861	518 aa	Known RBP	3.8	□□□□□ -1.8
RPS28B	YLR264W	POL5	P39985	1022 aa	Known RBP	3.8	□□□□□ -1.8
RPS28B	YLR264W	VPS27	P40343	622 aa	Known RBP	3.8	□□□□□ -1.8
RPS28B	YLR264W	AIM20	P40451	204 aa		3.8	□□□□□ -1.8
RPS28B	YLR264W	TAN1	P53072	289 aa	Predicted RBP	3.8	□□□□□ -1.8
RPS28B	YLR264W	YAF9	P53930	226 aa		3.8	□□□□□ -1.8
RPS28B	YLR264W	YPR172W	Q06608	200 aa		3.8	□□□□□ -1.8
RPS28B	YLR264W	PUS1	Q12211	544 aa	Known RBP	3.8	□□□□□ -1.8
RPS28B	YLR264W	TY4B-P	A0A0B7P3V8	1104 aa		3.79	□□□□□ -1.8
RPS28B	YLR264W	MSM1	P22438	575 aa		3.79	□□□□□ -1.8
RPS28B	YLR264W	MFT1	P33441	392 aa	Known RBP	3.79	□□□□□ -1.8
RPS28B	YLR264W	RRP14	P36080	434 aa	Known RBP	3.79	□□□□□ -1.8
RPS28B	YLR264W	PIM1	P36775	1133 aa		3.79	□□□□□ -1.8
RPS28B	YLR264W	IES1	P43579	692 aa		3.79	□□□□□ -1.8
RPS28B	YLR264W	VID30	P53076	958 aa		3.79	□□□□□ -1.8
RPS28B	YLR264W	CEF1	Q03654	590 aa	Predicted RBP	3.79	□□□□□ -1.8
RPS28B	YLR264W	ECM16	Q04217	1267 aa	Known RBP	3.79	□□□□□ -1.8
RPS28B	YLR264W	TMA64	Q04600	565 aa	Known RBP	3.79	□□□□□ -1.8
RPS28B	YLR264W	YLR257W	Q06146	321 aa	Known RBP	3.79	□□□□□ -1.8
RPS28B	YLR264W	YDL121C	Q07541	149 aa		3.79	□□□□□ -1.8
RPS28B	YLR264W	HSP42	Q12329	375 aa		3.79	□□□□□ -1.8
RPS28B	YLR264W	TY4A-H	Q6Q5P6	413 aa		3.79	□□□□□ -1.8
RPS28B	YLR264W	SUP35	P05453	685 aa	Known RBP	3.78	□□□□□ -1.8
RPS28B	YLR264W	PPH3	P32345	308 aa		3.78	□□□□□ -1.8
RPS28B	YLR264W	BYE1	P36106	594 aa		3.78	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms