RNA–Protein interactions for RNA: YLR088W

GAA1, Transcript of Subunit of the GPI:protein transamidase complex, yeastyeast

Gene GAA1, Length 1,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAA1YLR088W GEA2P39993 1459 aaKnown RBP9.12□□□□□ -0.95
GAA1YLR088W POL1P13382 1468 aa9.1□□□□□ -0.95
GAA1YLR088W TRM732Q03496 1420 aa9.08□□□□□ -0.96
GAA1YLR088W URN1Q06525 465 aaKnown RBP9.08□□□□□ -0.96
GAA1YLR088W SMC4Q12267 1418 aa9.06□□□□□ -0.96
GAA1YLR088W CKB1P43639 278 aa9.04□□□□□ -0.96
GAA1YLR088W ITT1Q04638 464 aa9.04□□□□□ -0.96
GAA1YLR088W YOR1P53049 1477 aa9.03□□□□□ -0.96
GAA1YLR088W YRF1-1P0CX20 1796 aa9.03□□□□□ -0.96
GAA1YLR088W YRF1-5P0CX21 1796 aa9.03□□□□□ -0.96
GAA1YLR088W YRF1-8P0CX22 1796 aa9.03□□□□□ -0.96
GAA1YLR088W SPP41P38904 1435 aa9.01□□□□□ -0.97
GAA1YLR088W NUP159P40477 1460 aa9.01□□□□□ -0.97
GAA1YLR088W TY1B-JR2P47100 1755 aaKnown RBP8.99□□□□□ -0.97
GAA1YLR088W TY1B-ER2Q03619 1755 aa8.99□□□□□ -0.97
GAA1YLR088W TY1B-MR1Q04214 1755 aa8.99□□□□□ -0.97
GAA1YLR088W TY1B-MR2Q04670 1755 aaKnown RBP8.99□□□□□ -0.97
GAA1YLR088W TY1B-LR1Q12088 1755 aaKnown RBP8.99□□□□□ -0.97
GAA1YLR088W TY1B-NL1Q12112 1755 aa8.99□□□□□ -0.97
GAA1YLR088W TY1B-GR1Q12141 1755 aa8.99□□□□□ -0.97
GAA1YLR088W TY1B-BLQ12490 1755 aa8.99□□□□□ -0.97
GAA1YLR088W VPS15P22219 1454 aa8.99□□□□□ -0.97
GAA1YLR088W STU1P38198 1513 aa8.98□□□□□ -0.97
GAA1YLR088W RIM101P33400 625 aa8.98□□□□□ -0.97
GAA1YLR088W NTE1Q04958 1679 aa8.98□□□□□ -0.97
GAA1YLR088W MMS1Q06211 1407 aa8.97□□□□□ -0.97
GAA1YLR088W RPL17AP05740 184 aaKnown RBP8.96□□□□□ -0.97
GAA1YLR088W RPL17BP46990 184 aaKnown RBP8.96□□□□□ -0.97
GAA1YLR088W TSC11P40061 1430 aa8.96□□□□□ -0.98
GAA1YLR088W DRS2P39524 1355 aa8.95□□□□□ -0.98
GAA1YLR088W VTH1P40438 1549 aa8.95□□□□□ -0.98
GAA1YLR088W VTH2P40890 1549 aa8.95□□□□□ -0.98
GAA1YLR088W RPO21P04050 1733 aaKnown RBP8.93□□□□□ -0.98
GAA1YLR088W YML020WQ03722 664 aa8.93□□□□□ -0.98
GAA1YLR088W IRC20Q06554 1556 aa8.92□□□□□ -0.98
GAA1YLR088W MYO4P32492 1471 aa8.89□□□□□ -0.99
GAA1YLR088W NOP8Q08287 484 aaPredicted RBP8.89□□□□□ -0.99
GAA1YLR088W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
GAA1YLR088W SNT2P53127 1403 aa8.86□□□□□ -0.99
GAA1YLR088W YFR006WP43590 535 aa8.85□□□□□ -0.99
GAA1YLR088W DNF2Q12675 1612 aa8.84□□□□□ -0.99
GAA1YLR088W SNQ2P32568 1501 aaKnown RBP8.83□□□□□ -1
GAA1YLR088W SPT21P35209 758 aa8.82□□□□□ -1
GAA1YLR088W NUP170P38181 1502 aa8.81□□□□□ -1
GAA1YLR088W SPB4P25808 606 aaPredicted RBP8.81□□□□□ -1
GAA1YLR088W ISW2Q08773 1120 aa8.8□□□□□ -1
GAA1YLR088W YAH1Q12184 172 aaKnown RBP8.78□□□□□ -1
GAA1YLR088W SPO14P36126 1683 aa8.78□□□□□ -1
GAA1YLR088W YLR271WQ06152 274 aa8.77□□□□□ -1
GAA1YLR088W OXP1P28273 1286 aa8.77□□□□□ -1.01
GAA1YLR088W YTA7P40340 1379 aa8.77□□□□□ -1.01
GAA1YLR088W ULS1Q08562 1619 aa8.75□□□□□ -1.01
GAA1YLR088W TOP1P04786 769 aa8.75□□□□□ -1.01
GAA1YLR088W PDR12Q02785 1511 aa8.74□□□□□ -1.01
GAA1YLR088W MET10P39692 1035 aa8.74□□□□□ -1.01
GAA1YLR088W SLX8P40072 274 aa8.73□□□□□ -1.01
GAA1YLR088W STH1P32597 1359 aa8.73□□□□□ -1.01
GAA1YLR088W MGA2P40578 1113 aa8.72□□□□□ -1.01
GAA1YLR088W KIN1P13185 1064 aa8.71□□□□□ -1.01
GAA1YLR088W YRB30P53107 440 aaPredicted RBP8.7□□□□□ -1.02
GAA1YLR088W TRM3Q07527 1436 aa8.69□□□□□ -1.02
GAA1YLR088W DOP1Q03921 1698 aa8.68□□□□□ -1.02
GAA1YLR088W REB1P21538 810 aa8.68□□□□□ -1.02
GAA1YLR088W RPG1P38249 964 aaKnown RBP8.68□□□□□ -1.02
GAA1YLR088W MLP2P40457 1679 aa8.67□□□□□ -1.02
GAA1YLR088W HGH1P48362 394 aaKnown RBP8.67□□□□□ -1.02
GAA1YLR088W GDB1Q06625 1536 aa8.67□□□□□ -1.02
GAA1YLR088W NOP7P53261 605 aaKnown RBP8.66□□□□□ -1.02
GAA1YLR088W SNU71P53207 620 aaKnown RBP8.66□□□□□ -1.02
GAA1YLR088W YPR148CQ06523 435 aa8.66□□□□□ -1.02
GAA1YLR088W YOR093CQ12275 1648 aa8.66□□□□□ -1.02
GAA1YLR088W IQG1Q12280 1495 aa8.65□□□□□ -1.02
GAA1YLR088W GEF1P37020 779 aa8.65□□□□□ -1.02
GAA1YLR088W SSA1P10591 642 aaKnown RBP8.64□□□□□ -1.03
GAA1YLR088W VPS70P47161 811 aa8.64□□□□□ -1.03
GAA1YLR088W PDR10P51533 1564 aa8.62□□□□□ -1.03
GAA1YLR088W RTT106P40161 455 aa8.61□□□□□ -1.03
GAA1YLR088W BUD3P25558 1636 aa8.61□□□□□ -1.03
GAA1YLR088W YNR021WP53723 404 aaKnown RBP8.61□□□□□ -1.03
GAA1YLR088W NUP157P40064 1391 aaKnown RBP8.6□□□□□ -1.03
GAA1YLR088W DSF2P38213 736 aa8.59□□□□□ -1.03
GAA1YLR088W CST9Q06032 482 aa8.59□□□□□ -1.03
GAA1YLR088W MRX12P47084 519 aa8.58□□□□□ -1.04
GAA1YLR088W BRL1P38770 471 aa8.57□□□□□ -1.04
GAA1YLR088W MAM3Q12296 706 aa8.57□□□□□ -1.04
GAA1YLR088W SET1P38827 1080 aaKnown RBP8.57□□□□□ -1.04
GAA1YLR088W SUB2Q07478 446 aaKnown RBP8.56□□□□□ -1.04
GAA1YLR088W ARO1P08566 1588 aaKnown RBP8.54□□□□□ -1.04
GAA1YLR088W PDR15Q04182 1529 aaKnown RBP8.54□□□□□ -1.04
GAA1YLR088W YIL055CP40523 627 aaKnown RBP8.54□□□□□ -1.04
GAA1YLR088W CHC1P22137 1653 aaKnown RBP8.54□□□□□ -1.04
GAA1YLR088W GUA1P38625 525 aaKnown RBP8.52□□□□□ -1.04
GAA1YLR088W AIM7Q12156 149 aa8.52□□□□□ -1.04
GAA1YLR088W GLC3P32775 704 aa8.52□□□□□ -1.05
GAA1YLR088W PAM1P37304 830 aaKnown RBP8.5□□□□□ -1.05
GAA1YLR088W DNF3Q12674 1656 aa8.48□□□□□ -1.05
GAA1YLR088W PBS2P08018 668 aa8.47□□□□□ -1.05
GAA1YLR088W RAM2P29703 316 aa8.47□□□□□ -1.05
GAA1YLR088W ATG36P46983 293 aa8.45□□□□□ -1.06
GAA1YLR088W SEC7P11075 2009 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms