RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C STS1P38637 319 aa8.06□□□□□ -1.12
SDO1YLR022C DPS1P04802 557 aaKnown RBP8.05□□□□□ -1.12
SDO1YLR022C RCR1P38212 213 aa8.04□□□□□ -1.12
SDO1YLR022C RGA1P39083 1007 aa8.04□□□□□ -1.12
SDO1YLR022C PTC4P38089 393 aa8.03□□□□□ -1.12
SDO1YLR022C HTA1P04911 132 aaKnown RBP8.01□□□□□ -1.13
SDO1YLR022C HTA2P04912 132 aa8.01□□□□□ -1.13
SDO1YLR022C GYP5Q12344 894 aa8□□□□□ -1.13
SDO1YLR022C YEL023CP39992 682 aa7.98□□□□□ -1.13
SDO1YLR022C DCW1P36091 449 aa7.93□□□□□ -1.14
SDO1YLR022C YDR344CQ05510 147 aa7.93□□□□□ -1.14
SDO1YLR022C SRC1Q03707 834 aa7.91□□□□□ -1.14
SDO1YLR022C ELP4Q02884 456 aaKnown RBP7.9□□□□□ -1.14
SDO1YLR022C PML39Q03760 334 aa7.84□□□□□ -1.15
SDO1YLR022C ARH1P48360 493 aa7.82□□□□□ -1.16
SDO1YLR022C INO80P53115 1489 aa7.81□□□□□ -1.16
SDO1YLR022C MON2P48563 1636 aaPredicted RBP7.75□□□□□ -1.17
SDO1YLR022C SPT23P35210 1082 aa7.73□□□□□ -1.17
SDO1YLR022C MIF2P35201 549 aa7.71□□□□□ -1.18
SDO1YLR022C RAM2P29703 316 aa7.69□□□□□ -1.18
SDO1YLR022C GRE2Q12068 342 aaKnown RBP7.68□□□□□ -1.18
SDO1YLR022C MAK11P20484 414 aaKnown RBP7.65□□□□□ -1.18
SDO1YLR022C EDS1P38073 919 aa7.65□□□□□ -1.18
SDO1YLR022C MID1P41821 548 aa7.65□□□□□ -1.18
SDO1YLR022C PTC3P34221 468 aaKnown RBP7.61□□□□□ -1.19
SDO1YLR022C ATH1P48016 1211 aa7.61□□□□□ -1.19
SDO1YLR022C YML082WQ04533 649 aaKnown RBP7.61□□□□□ -1.19
SDO1YLR022C BNI4P53858 892 aa7.59□□□□□ -1.19
SDO1YLR022C HAP5Q02516 242 aa7.59□□□□□ -1.19
SDO1YLR022C COQ8P27697 501 aa7.58□□□□□ -1.2
SDO1YLR022C NST1P53935 1240 aa7.58□□□□□ -1.2
SDO1YLR022C PEX29Q03370 554 aa7.58□□□□□ -1.2
SDO1YLR022C GUT1P32190 709 aa7.57□□□□□ -1.2
SDO1YLR022C PTC2P39966 464 aaKnown RBP7.54□□□□□ -1.2
SDO1YLR022C RAS1P01119 309 aa7.53□□□□□ -1.2
SDO1YLR022C AI4P03878 556 aa7.49□□□□□ -1.21
SDO1YLR022C MPH3P0CE00 602 aa7.49□□□□□ -1.21
SDO1YLR022C SOL3P38858 249 aa7.49□□□□□ -1.21
SDO1YLR022C TRK1P12685 1235 aa7.47□□□□□ -1.21
SDO1YLR022C YPL062WQ02781 134 aa7.45□□□□□ -1.22
SDO1YLR022C ILV3P39522 585 aaKnown RBP7.43□□□□□ -1.22
SDO1YLR022C MPC54Q08550 464 aa7.41□□□□□ -1.22
SDO1YLR022C DNA2P38859 1522 aa7.41□□□□□ -1.22
SDO1YLR022C AMS1P22855 1083 aa7.38□□□□□ -1.23
SDO1YLR022C YGR273CP53329 174 aa7.37□□□□□ -1.23
SDO1YLR022C NMA111P53920 997 aa7.36□□□□□ -1.23
SDO1YLR022C YPR015CQ12531 247 aa7.34□□□□□ -1.23
SDO1YLR022C NOP53Q12080 455 aaKnown RBP7.31□□□□□ -1.24
SDO1YLR022C RAM1P22007 431 aa7.28□□□□□ -1.24
SDO1YLR022C SLI15P38283 698 aa7.28□□□□□ -1.24
SDO1YLR022C DPL1Q05567 589 aa7.28□□□□□ -1.24
SDO1YLR022C GYP1Q08484 637 aa7.26□□□□□ -1.25
SDO1YLR022C SET1P38827 1080 aaKnown RBP7.24□□□□□ -1.25
SDO1YLR022C KEX1P09620 729 aa7.23□□□□□ -1.25
SDO1YLR022C KOG1P38873 1557 aa7.23□□□□□ -1.25
SDO1YLR022C SDH2P21801 266 aa7.22□□□□□ -1.25
SDO1YLR022C SAS4Q04003 481 aa7.21□□□□□ -1.26
SDO1YLR022C VHR2P40041 505 aa7.19□□□□□ -1.26
SDO1YLR022C SWR1Q05471 1514 aa7.18□□□□□ -1.26
SDO1YLR022C ISU2Q12056 156 aa7.18□□□□□ -1.26
SDO1YLR022C CDC73Q06697 393 aa7.17□□□□□ -1.26
SDO1YLR022C YLR326WQ06170 240 aaKnown RBP7.16□□□□□ -1.26
SDO1YLR022C YEL077CQ3E7X8 1277 aa7.16□□□□□ -1.26
SDO1YLR022C UBP14P38237 781 aaKnown RBP7.14□□□□□ -1.27
SDO1YLR022C PCS60P38137 543 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27 RIP-Chip
SDO1YLR022C BRE2P43132 505 aa7.11□□□□□ -1.27
SDO1YLR022C GAR1P28007 205 aaKnown RBP7.1□□□□□ -1.27
SDO1YLR022C RAD54P32863 898 aa7.09□□□□□ -1.27
SDO1YLR022C PDR1P12383 1068 aa7.08□□□□□ -1.28
SDO1YLR022C GBP2P25555 427 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28not detected
SDO1YLR022C MRF1P30775 413 aaPredicted RBP7.07□□□□□ -1.28
SDO1YLR022C GCR2Q01722 534 aa7.07□□□□□ -1.28
SDO1YLR022C YDR090CQ03193 310 aa7.02□□□□□ -1.29
SDO1YLR022C SPA2P23201 1466 aaKnown RBP7.01□□□□□ -1.29
SDO1YLR022C KIC1P38692 1080 aa6.99□□□□□ -1.29
SDO1YLR022C AIR1P40507 360 aaKnown RBP6.98□□□□□ -1.29
SDO1YLR022C RPP1BP10622 106 aaKnown RBP6.97□□□□□ -1.29
SDO1YLR022C IFH1P39520 1085 aa6.96□□□□□ -1.3
SDO1YLR022C YRR1Q12172 810 aa6.96□□□□□ -1.3
SDO1YLR022C PEX21P50091 288 aa6.94□□□□□ -1.3
SDO1YLR022C REF2P42073 533 aaPredicted RBP6.93□□□□□ -1.3
SDO1YLR022C PRT1P06103 763 aaKnown RBP6.92□□□□□ -1.3
SDO1YLR022C ERG12P07277 443 aa6.92□□□□□ -1.3
SDO1YLR022C VPS70P47161 811 aa6.92□□□□□ -1.3
SDO1YLR022C YPR148CQ06523 435 aa6.92□□□□□ -1.3
SDO1YLR022C BUD20Q08004 166 aaPredicted RBP6.92□□□□□ -1.3
SDO1YLR022C MET22P32179 357 aa6.91□□□□□ -1.3
SDO1YLR022C CLA4P48562 842 aa6.9□□□□□ -1.3
SDO1YLR022C ENV9Q08651 330 aa6.9□□□□□ -1.3
SDO1YLR022C TUM1Q08686 304 aaKnown RBP6.9□□□□□ -1.3
SDO1YLR022C STR2P47164 639 aa6.89□□□□□ -1.31
SDO1YLR022C GAP1P19145 602 aaPredicted RBP6.88□□□□□ -1.31
SDO1YLR022C CST6P40535 587 aa6.88□□□□□ -1.31
SDO1YLR022C ISM1P48526 1002 aa6.88□□□□□ -1.31
SDO1YLR022C NUD1P32336 851 aa6.87□□□□□ -1.31
SDO1YLR022C ORC6P38826 435 aa6.86□□□□□ -1.31
SDO1YLR022C CSC1Q06538 782 aa6.86□□□□□ -1.31
SDO1YLR022C TY1B-DR4Q07793 1604 aa6.86□□□□□ -1.31
SDO1YLR022C TCB3Q03640 1545 aaKnown RBP6.86□□□□□ -1.31
SDO1YLR022C CDC4P07834 779 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 172.5 ms