RNA–Protein interactions for RNA: YKR028W

SAP190, Transcript of Protein that forms a complex with the Sit4p protein phosphatase, yeastyeast

Gene SAP190, Length 3,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAP190YKR028W TY1B-LR3P0C2I6 1755 aaKnown RBP3.8□□□□□ -1.8
SAP190YKR028W TY1B-PR1P0C2I9 1755 aaKnown RBP3.8□□□□□ -1.8
SAP190YKR028W TY1B-PR2P0C2J0 1756 aa3.8□□□□□ -1.8
SAP190YKR028W TY1B-PR3P0C2J1 1755 aaKnown RBP3.8□□□□□ -1.8
SAP190YKR028W TY1B-JR1P47098 1755 aa3.8□□□□□ -1.8
SAP190YKR028W TY1B-ML2Q03434 1755 aaKnown RBP3.8□□□□□ -1.8
SAP190YKR028W TY1B-ER1Q03612 1755 aa3.8□□□□□ -1.8
SAP190YKR028W TY1B-ML1Q04711 1755 aaKnown RBP3.8□□□□□ -1.8
SAP190YKR028W TY1B-GR2Q12269 1755 aa3.8□□□□□ -1.8
SAP190YKR028W TY1B-OLQ12273 1755 aa3.8□□□□□ -1.8
SAP190YKR028W TY1B-PLQ12414 1755 aaKnown RBP3.8□□□□□ -1.8
SAP190YKR028W YCF1P39109 1515 aaKnown RBP3.79□□□□□ -1.8
SAP190YKR028W NSR1P27476 414 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SAP190YKR028W MST1P07236 462 aa3.78□□□□□ -1.8
SAP190YKR028W SKI3P17883 1432 aaKnown RBP3.78□□□□□ -1.8
SAP190YKR028W RKR1Q04781 1562 aa3.77□□□□□ -1.81
SAP190YKR028W MRM1P25270 412 aa3.77□□□□□ -1.81
SAP190YKR028W TOP2P06786 1428 aaKnown RBP3.77□□□□□ -1.81
SAP190YKR028W CDC25P04821 1589 aa3.76□□□□□ -1.81
SAP190YKR028W BUD31P25337 157 aaPredicted RBP3.76□□□□□ -1.81
SAP190YKR028W UFD4P33202 1483 aa3.76□□□□□ -1.81
SAP190YKR028W SMC4Q12267 1418 aa3.75□□□□□ -1.81
SAP190YKR028W YOR1P53049 1477 aa3.75□□□□□ -1.81
SAP190YKR028W ESC1Q03661 1658 aaKnown RBP3.74□□□□□ -1.81
SAP190YKR028W CHD1P32657 1468 aa3.74□□□□□ -1.81
SAP190YKR028W RCR1P38212 213 aa3.73□□□□□ -1.81
SAP190YKR028W STU1P38198 1513 aa3.73□□□□□ -1.81
SAP190YKR028W MYO4P32492 1471 aa3.73□□□□□ -1.81
SAP190YKR028W RPA190P10964 1664 aaKnown RBP3.73□□□□□ -1.81
SAP190YKR028W VPS29P38759 282 aa3.72□□□□□ -1.81
SAP190YKR028W TY1B-JR2P47100 1755 aaKnown RBP3.72□□□□□ -1.81
SAP190YKR028W TY1B-ER2Q03619 1755 aa3.72□□□□□ -1.81
SAP190YKR028W TY1B-MR1Q04214 1755 aa3.72□□□□□ -1.81
SAP190YKR028W TY1B-MR2Q04670 1755 aaKnown RBP3.72□□□□□ -1.81
SAP190YKR028W TY1B-LR1Q12088 1755 aaKnown RBP3.72□□□□□ -1.81
SAP190YKR028W TY1B-NL1Q12112 1755 aa3.72□□□□□ -1.81
SAP190YKR028W TY1B-GR1Q12141 1755 aa3.72□□□□□ -1.81
SAP190YKR028W TY1B-BLQ12490 1755 aa3.72□□□□□ -1.81
SAP190YKR028W YAP5P40574 245 aa3.72□□□□□ -1.81
SAP190YKR028W YOR238WQ08634 303 aa3.71□□□□□ -1.82
SAP190YKR028W PAN1P32521 1480 aa3.7□□□□□ -1.82
SAP190YKR028W NTE1Q04958 1679 aa3.7□□□□□ -1.82
SAP190YKR028W RTG3P38165 486 aa3.69□□□□□ -1.82
SAP190YKR028W RPO21P04050 1733 aaKnown RBP3.69□□□□□ -1.82
SAP190YKR028W YTA7P40340 1379 aa3.69□□□□□ -1.82
SAP190YKR028W MET5P47169 1442 aa3.68□□□□□ -1.82
SAP190YKR028W MLP2P40457 1679 aa3.68□□□□□ -1.82
SAP190YKR028W MMS22Q06164 1454 aa3.68□□□□□ -1.82
SAP190YKR028W STS1P38637 319 aa3.68□□□□□ -1.82
SAP190YKR028W YMR1P47147 688 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
SAP190YKR028W DNF1P32660 1571 aa3.66□□□□□ -1.82
SAP190YKR028W PIB1Q06651 286 aa3.66□□□□□ -1.82
SAP190YKR028W YBL029C-AQ3E756 94 aa3.66□□□□□ -1.82
SAP190YKR028W VTH1P40438 1549 aa3.66□□□□□ -1.82
SAP190YKR028W VTH2P40890 1549 aa3.66□□□□□ -1.82
SAP190YKR028W SPP41P38904 1435 aa3.65□□□□□ -1.83
SAP190YKR028W DBP1P24784 617 aaKnown RBP3.65□□□□□ -1.83
SAP190YKR028W RAM2P29703 316 aa3.65□□□□□ -1.83
SAP190YKR028W UBP9P39967 754 aa3.65□□□□□ -1.83
SAP190YKR028W YRF1-1P0CX20 1796 aa3.64□□□□□ -1.83
SAP190YKR028W YRF1-5P0CX21 1796 aa3.64□□□□□ -1.83
SAP190YKR028W YRF1-8P0CX22 1796 aa3.64□□□□□ -1.83
SAP190YKR028W YFR006WP43590 535 aa3.64□□□□□ -1.83
SAP190YKR028W SNQ2P32568 1501 aaKnown RBP3.63□□□□□ -1.83
SAP190YKR028W VNX1P42839 908 aa3.63□□□□□ -1.83
SAP190YKR028W TSC11P40061 1430 aa3.62□□□□□ -1.83
SAP190YKR028W ULS1Q08562 1619 aa3.62□□□□□ -1.83
SAP190YKR028W SNT2P53127 1403 aa3.62□□□□□ -1.83
SAP190YKR028W TRM732Q03496 1420 aa3.61□□□□□ -1.83
SAP190YKR028W VMA1P17255 1071 aaKnown RBP3.61□□□□□ -1.83
SAP190YKR028W IRC20Q06554 1556 aa3.61□□□□□ -1.83
SAP190YKR028W PDR12Q02785 1511 aa3.6□□□□□ -1.83
SAP190YKR028W MAK11P20484 414 aaKnown RBP3.6□□□□□ -1.83
SAP190YKR028W LTE1P07866 1435 aa3.6□□□□□ -1.83
SAP190YKR028W SAM3Q08986 587 aa3.59□□□□□ -1.83
SAP190YKR028W NUP159P40477 1460 aa3.59□□□□□ -1.84
SAP190YKR028W STH1P32597 1359 aa3.59□□□□□ -1.84
SAP190YKR028W WSC3Q12215 556 aa3.59□□□□□ -1.84
SAP190YKR028W SPO14P36126 1683 aa3.58□□□□□ -1.84
SAP190YKR028W GEA2P39993 1459 aaKnown RBP3.58□□□□□ -1.84
SAP190YKR028W GTT3P39996 337 aa3.57□□□□□ -1.84
SAP190YKR028W YOL036WQ08206 761 aa3.57□□□□□ -1.84
SAP190YKR028W EDS1P38073 919 aa3.57□□□□□ -1.84
SAP190YKR028W PDR15Q04182 1529 aaKnown RBP3.56□□□□□ -1.84
SAP190YKR028W YBT1P32386 1661 aa3.56□□□□□ -1.84
SAP190YKR028W GDB1Q06625 1536 aa3.56□□□□□ -1.84
SAP190YKR028W BUD3P25558 1636 aa3.56□□□□□ -1.84
SAP190YKR028W TIF11P38912 153 aaKnown RBP3.56□□□□□ -1.84
SAP190YKR028W SPP1Q03012 353 aa3.56□□□□□ -1.84
SAP190YKR028W IOC2Q12072 812 aa3.56□□□□□ -1.84
SAP190YKR028W VPS15P22219 1454 aa3.55□□□□□ -1.84
SAP190YKR028W MSB4Q12317 492 aa3.55□□□□□ -1.84
SAP190YKR028W BNI1P41832 1953 aa3.55□□□□□ -1.84
SAP190YKR028W DOP1Q03921 1698 aa3.55□□□□□ -1.84
SAP190YKR028W SET4P42948 560 aa3.55□□□□□ -1.84
SAP190YKR028W TAF7Q05021 590 aa3.55□□□□□ -1.84
SAP190YKR028W COQ8P27697 501 aa3.54□□□□□ -1.84
SAP190YKR028W NUP170P38181 1502 aa3.53□□□□□ -1.84
SAP190YKR028W CAT8P39113 1433 aa3.53□□□□□ -1.84
SAP190YKR028W PDR10P51533 1564 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms