RNA–Protein interactions for RNA: YKR024C

DBP7, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box family, yeast

Gene DBP7, Length 2,229 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP7	YKR024C	HTA1	P04911	132 aa	Known RBP	4.58	□□□□□ -1.68
DBP7	YKR024C	HTA2	P04912	132 aa		4.58	□□□□□ -1.68
DBP7	YKR024C	DCW1	P36091	449 aa		4.56	□□□□□ -1.68
DBP7	YKR024C	SAP30	P38429	201 aa		4.56	□□□□□ -1.68
DBP7	YKR024C	YDL129W	Q07555	291 aa		4.56	□□□□□ -1.68
DBP7	YKR024C	DAN4	P47179	1161 aa		4.55	□□□□□ -1.68
DBP7	YKR024C	CHL1	P22516	861 aa	Predicted RBP	4.54	□□□□□ -1.68
DBP7	YKR024C	PTC4	P38089	393 aa		4.54	□□□□□ -1.68
DBP7	YKR024C	YEL023C	P39992	682 aa		4.53	□□□□□ -1.68
DBP7	YKR024C	XDJ1	P39102	459 aa		4.52	□□□□□ -1.69
DBP7	YKR024C	GRE2	Q12068	342 aa	Known RBP	4.52	□□□□□ -1.69
DBP7	YKR024C	DPS1	P04802	557 aa	Known RBP	4.51	□□□□□ -1.69
DBP7	YKR024C	MIF2	P35201	549 aa		4.49	□□□□□ -1.69
DBP7	YKR024C	LEO1	P38439	464 aa		4.49	□□□□□ -1.69
DBP7	YKR024C	PRE3	P38624	215 aa		4.49	□□□□□ -1.69
DBP7	YKR024C	MAK11	P20484	414 aa	Known RBP	4.49	□□□□□ -1.69
DBP7	YKR024C	ATH1	P48016	1211 aa		4.49	□□□□□ -1.69
DBP7	YKR024C	GUT1	P32190	709 aa		4.46	□□□□□ -1.69
DBP7	YKR024C	PTC3	P34221	468 aa	Known RBP	4.45	□□□□□ -1.7
DBP7	YKR024C	PML39	Q03760	334 aa		4.45	□□□□□ -1.7
DBP7	YKR024C	RAM2	P29703	316 aa		4.44	□□□□□ -1.7
DBP7	YKR024C	ELP4	Q02884	456 aa	Known RBP	4.44	□□□□□ -1.7
DBP7	YKR024C	VRP1	P37370	817 aa		4.42	□□□□□ -1.7
DBP7	YKR024C	COQ8	P27697	501 aa		4.42	□□□□□ -1.7
DBP7	YKR024C	EDS1	P38073	919 aa		4.42	□□□□□ -1.7
DBP7	YKR024C	PEX29	Q03370	554 aa		4.4	□□□□□ -1.7
DBP7	YKR024C	NOP53	Q12080	455 aa	Known RBP	4.39	□□□□□ -1.71
DBP7	YKR024C	ARH1	P48360	493 aa		4.38	□□□□□ -1.71
DBP7	YKR024C	AI4	P03878	556 aa		4.37	□□□□□ -1.71
DBP7	YKR024C	MPH3	P0CE00	602 aa		4.37	□□□□□ -1.71
DBP7	YKR024C	SPT23	P35210	1082 aa		4.36	□□□□□ -1.71
DBP7	YKR024C	SAS10	Q12136	610 aa	Predicted RBP	4.36	□□□□□ -1.71
DBP7	YKR024C	MID1	P41821	548 aa		4.36	□□□□□ -1.71
DBP7	YKR024C	NST1	P53935	1240 aa		4.35	□□□□□ -1.71
DBP7	YKR024C	SOL3	P38858	249 aa		4.34	□□□□□ -1.72
DBP7	YKR024C	SRC1	Q03707	834 aa		4.34	□□□□□ -1.72
DBP7	YKR024C	YDR344C	Q05510	147 aa		4.33	□□□□□ -1.72
DBP7	YKR024C	HAP5	Q02516	242 aa		4.33	□□□□□ -1.72
DBP7	YKR024C	LEU3	P08638	886 aa		4.32	□□□□□ -1.72
DBP7	YKR024C	YGR273C	P53329	174 aa		4.32	□□□□□ -1.72
DBP7	YKR024C	PTC2	P39966	464 aa	Known RBP	4.3	□□□□□ -1.72
DBP7	YKR024C	BNI4	P53858	892 aa		4.3	□□□□□ -1.72
DBP7	YKR024C	ILV3	P39522	585 aa	Known RBP	4.29	□□□□□ -1.72
DBP7	YKR024C	YML082W	Q04533	649 aa	Known RBP	4.27	□□□□□ -1.73
DBP7	YKR024C	MPC54	Q08550	464 aa		4.27	□□□□□ -1.73
DBP7	YKR024C	DPL1	Q05567	589 aa		4.26	□□□□□ -1.73
DBP7	YKR024C	NMA111	P53920	997 aa		4.25	□□□□□ -1.73
DBP7	YKR024C	SLI15	P38283	698 aa		4.25	□□□□□ -1.73
DBP7	YKR024C	DMA2	P53924	522 aa		4.22	□□□□□ -1.73
DBP7	YKR024C	KEX1	P09620	729 aa		4.22	□□□□□ -1.73
DBP7	YKR024C	RPP1B	P10622	106 aa	Known RBP	4.22	□□□□□ -1.73
DBP7	YKR024C	SET1	P38827	1080 aa	Known RBP	4.22	□□□□□ -1.73
DBP7	YKR024C	ISU2	Q12056	156 aa		4.22	□□□□□ -1.73
DBP7	YKR024C	YPL062W	Q02781	134 aa		4.21	□□□□□ -1.74
DBP7	YKR024C	NOP2	P40991	618 aa	Known RBP	4.19	□□□□□ -1.74
DBP7	YKR024C	GYP1	Q08484	637 aa		4.18	□□□□□ -1.74
DBP7	YKR024C	RAD54	P32863	898 aa		4.17	□□□□□ -1.74
DBP7	YKR024C	IFH1	P39520	1085 aa		4.17	□□□□□ -1.74
DBP7	YKR024C	VHR2	P40041	505 aa		4.17	□□□□□ -1.74
DBP7	YKR024C	YLR326W	Q06170	240 aa	Known RBP	4.17	□□□□□ -1.74
DBP7	YKR024C	CDC73	Q06697	393 aa		4.17	□□□□□ -1.74
DBP7	YKR024C	UBP14	P38237	781 aa	Known RBP	4.15	□□□□□ -1.75
DBP7	YKR024C	KIC1	P38692	1080 aa		4.15	□□□□□ -1.75
DBP7	YKR024C	SAS4	Q04003	481 aa		4.15	□□□□□ -1.75
DBP7	YKR024C	RAM1	P22007	431 aa		4.14	□□□□□ -1.75
DBP7	YKR024C	YPR015C	Q12531	247 aa		4.14	□□□□□ -1.75
DBP7	YKR024C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
DBP7	YKR024C	PEX21	P50091	288 aa		4.13	□□□□□ -1.75
DBP7	YKR024C	RAS1	P01119	309 aa		4.11	□□□□□ -1.75
DBP7	YKR024C	AMS1	P22855	1083 aa		4.11	□□□□□ -1.75
DBP7	YKR024C	PDR1	P12383	1068 aa		4.11	□□□□□ -1.75
DBP7	YKR024C	YEL077C	Q3E7X8	1277 aa		4.11	□□□□□ -1.75
DBP7	YKR024C	MRF1	P30775	413 aa	Predicted RBP	4.1	□□□□□ -1.75
DBP7	YKR024C	TRK1	P12685	1235 aa		4.09	□□□□□ -1.76
DBP7	YKR024C	RPN1	P38764	993 aa	Known RBP	4.08	□□□□□ -1.76
DBP7	YKR024C	REF2	P42073	533 aa	Predicted RBP	4.08	□□□□□ -1.76
DBP7	YKR024C	CSC1	Q06538	782 aa		4.08	□□□□□ -1.76
DBP7	YKR024C	TFB4	Q12004	338 aa		4.07	□□□□□ -1.76
DBP7	YKR024C	YRR1	Q12172	810 aa		4.07	□□□□□ -1.76
DBP7	YKR024C	PRT1	P06103	763 aa	Known RBP	4.06	□□□□□ -1.76
DBP7	YKR024C	YDR090C	Q03193	310 aa		4.06	□□□□□ -1.76
DBP7	YKR024C	NPL4	P33755	580 aa		4.06	□□□□□ -1.76
DBP7	YKR024C	YPR148C	Q06523	435 aa		4.05	□□□□□ -1.76
DBP7	YKR024C	ERG12	P07277	443 aa		4.04	□□□□□ -1.76
DBP7	YKR024C	CAB3	P36076	571 aa		4.04	□□□□□ -1.76
DBP7	YKR024C	MAK21	Q12176	1025 aa	Known RBP	4.04	□□□□□ -1.76
DBP7	YKR024C	RLF2	Q12495	606 aa		4.04	□□□□□ -1.76
DBP7	YKR024C	BUD20	Q08004	166 aa	Predicted RBP	4.03	□□□□□ -1.76
DBP7	YKR024C	TUM1	Q08686	304 aa	Known RBP	4.03	□□□□□ -1.76
DBP7	YKR024C	GAP1	P19145	602 aa	Predicted RBP	4.02	□□□□□ -1.77
DBP7	YKR024C	SDH2	P21801	266 aa		4.02	□□□□□ -1.77
DBP7	YKR024C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
DBP7	YKR024C	NUD1	P32336	851 aa		4.02	□□□□□ -1.77
DBP7	YKR024C	EBP2	P36049	427 aa	Known RBP	4.02	□□□□□ -1.77
DBP7	YKR024C	CKB1	P43639	278 aa		4.02	□□□□□ -1.77
DBP7	YKR024C	VPS70	P47161	811 aa		4.02	□□□□□ -1.77
DBP7	YKR024C	ISM1	P48526	1002 aa		4.01	□□□□□ -1.77
DBP7	YKR024C	ORC1	P54784	914 aa	Predicted RBP	4.01	□□□□□ -1.77
DBP7	YKR024C	SPT16	P32558	1035 aa	Known RBP	4.01	□□□□□ -1.77
DBP7	YKR024C	STR2	P47164	639 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms