RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W RPO21P04050 1733 aaKnown RBP18.09■□□□□ 0.49
TCD2YKL027W SAS10Q12136 610 aaPredicted RBP18.04■□□□□ 0.48
TCD2YKL027W SNT2P53127 1403 aa18.03■□□□□ 0.48
TCD2YKL027W MLP2P40457 1679 aa18.03■□□□□ 0.48
TCD2YKL027W TAF7Q05021 590 aa18■□□□□ 0.47
TCD2YKL027W YRF1-1P0CX20 1796 aa17.99■□□□□ 0.47
TCD2YKL027W YRF1-5P0CX21 1796 aa17.99■□□□□ 0.47
TCD2YKL027W YRF1-8P0CX22 1796 aa17.99■□□□□ 0.47
TCD2YKL027W LTE1P07866 1435 aa17.98■□□□□ 0.47
TCD2YKL027W PDR15Q04182 1529 aaKnown RBP17.93■□□□□ 0.46
TCD2YKL027W ULS1Q08562 1619 aa17.93■□□□□ 0.46
TCD2YKL027W VPS15P22219 1454 aa17.9■□□□□ 0.46
TCD2YKL027W GEA2P39993 1459 aaKnown RBP17.88■□□□□ 0.45
TCD2YKL027W RTT106P40161 455 aa17.86■□□□□ 0.45
TCD2YKL027W MET10P39692 1035 aa17.79■□□□□ 0.44
TCD2YKL027W PDR12Q02785 1511 aa17.77■□□□□ 0.44
TCD2YKL027W IRC20Q06554 1556 aa17.75■□□□□ 0.43
TCD2YKL027W SPO14P36126 1683 aa17.72■□□□□ 0.43
TCD2YKL027W GEA1P47102 1408 aaPredicted RBP17.71■□□□□ 0.43
TCD2YKL027W IFH1P39520 1085 aa17.71■□□□□ 0.42
TCD2YKL027W GDB1Q06625 1536 aa17.66■□□□□ 0.42
TCD2YKL027W BNI1P41832 1953 aa17.65■□□□□ 0.42
TCD2YKL027W DRS2P39524 1355 aa17.64■□□□□ 0.41
TCD2YKL027W NUP170P38181 1502 aa17.59■□□□□ 0.41
TCD2YKL027W CAT8P39113 1433 aa17.59■□□□□ 0.41
TCD2YKL027W NUP157P40064 1391 aaKnown RBP17.59■□□□□ 0.41
TCD2YKL027W ITT1Q04638 464 aa17.58■□□□□ 0.4
TCD2YKL027W TY3B-GQ99315 1547 aa17.56■□□□□ 0.4
TCD2YKL027W PDR10P51533 1564 aa17.55■□□□□ 0.4
TCD2YKL027W YBT1P32386 1661 aa17.53■□□□□ 0.4
TCD2YKL027W IQG1Q12280 1495 aa17.53■□□□□ 0.4
TCD2YKL027W BUD3P25558 1636 aa17.49■□□□□ 0.39
TCD2YKL027W MMS1Q06211 1407 aa17.42■□□□□ 0.38
TCD2YKL027W TRM3Q07527 1436 aa17.41■□□□□ 0.38
TCD2YKL027W DOP1Q03921 1698 aa17.39■□□□□ 0.37
TCD2YKL027W ARO1P08566 1588 aaKnown RBP17.38■□□□□ 0.37
TCD2YKL027W IKI3Q06706 1349 aaKnown RBP17.32■□□□□ 0.36
TCD2YKL027W CKB1P43639 278 aa17.29■□□□□ 0.36
TCD2YKL027W SEC7P11075 2009 aaKnown RBP17.27■□□□□ 0.35
TCD2YKL027W YSP2Q06681 1438 aa17.26■□□□□ 0.35
TCD2YKL027W SRB8P25648 1427 aa17.25■□□□□ 0.35
TCD2YKL027W CHC1P22137 1653 aaKnown RBP17.23■□□□□ 0.35
TCD2YKL027W DNF2Q12675 1612 aa17.22■□□□□ 0.35
TCD2YKL027W BNR1P40450 1375 aa17.16■□□□□ 0.34
TCD2YKL027W ABP1P15891 592 aaKnown RBP17.1■□□□□ 0.33
TCD2YKL027W SSM4P40318 1319 aa17.06■□□□□ 0.32
TCD2YKL027W BUD21Q08492 214 aaPredicted RBP17.02■□□□□ 0.32
TCD2YKL027W YOR093CQ12275 1648 aa16.95■□□□□ 0.3
TCD2YKL027W MIF2P35201 549 aa16.93■□□□□ 0.3
TCD2YKL027W URN1Q06525 465 aaKnown RBP16.86■□□□□ 0.29
TCD2YKL027W GCN2P15442 1659 aa16.83■□□□□ 0.29
TCD2YKL027W YAP3P38749 330 aa16.83■□□□□ 0.28
TCD2YKL027W NUP188P52593 1655 aaKnown RBP16.8■□□□□ 0.28
TCD2YKL027W DNF3Q12674 1656 aa16.78■□□□□ 0.28
TCD2YKL027W VMR1P38735 1592 aa16.73■□□□□ 0.27
TCD2YKL027W PDR5P33302 1511 aaKnown RBP16.71■□□□□ 0.27
TCD2YKL027W IPL1P38991 367 aa16.69■□□□□ 0.26
TCD2YKL027W IML1P47170 1584 aa16.67■□□□□ 0.26
TCD2YKL027W HAP1P0CE41 1502 aa16.65■□□□□ 0.26
TCD2YKL027W TYS1P36421 394 aaKnown RBP16.57■□□□□ 0.24
TCD2YKL027W PAF1P38351 445 aa16.55■□□□□ 0.24
TCD2YKL027W MAK10Q02197 733 aa16.55■□□□□ 0.24
TCD2YKL027W PDR11P40550 1411 aa16.52■□□□□ 0.24
TCD2YKL027W RAV1P47104 1357 aa16.48■□□□□ 0.23
TCD2YKL027W NOP7P53261 605 aaKnown RBP16.45■□□□□ 0.22
TCD2YKL027W BFR2Q06631 534 aaKnown RBP16.45■□□□□ 0.22
TCD2YKL027W YFR006WP43590 535 aa16.39■□□□□ 0.21
TCD2YKL027W RTC1Q08281 1341 aa16.38■□□□□ 0.21
TCD2YKL027W USO1P25386 1790 aa16.35■□□□□ 0.21
TCD2YKL027W TY1B-NL2Q99337 1749 aaKnown RBP16.34■□□□□ 0.21
TCD2YKL027W NUP192P47054 1683 aa16.26■□□□□ 0.19
TCD2YKL027W BCK1Q01389 1478 aa16.24■□□□□ 0.19
TCD2YKL027W YMR196WQ04336 1088 aa16.22■□□□□ 0.19
TCD2YKL027W MRX12P47084 519 aa16.19■□□□□ 0.18
TCD2YKL027W CFT1Q06632 1357 aaKnown RBP16.18■□□□□ 0.18
TCD2YKL027W ALD4P46367 519 aaKnown RBP16.18■□□□□ 0.18
TCD2YKL027W KRE5P22023 1365 aa16.17■□□□□ 0.18
TCD2YKL027W ESL2P36168 1195 aa16.16■□□□□ 0.18
TCD2YKL027W RAD9P14737 1309 aa16.14■□□□□ 0.17
TCD2YKL027W RIA1P53893 1110 aa16.13■□□□□ 0.17
TCD2YKL027W CAB1Q04430 367 aa16.11■□□□□ 0.17
TCD2YKL027W TAF5P38129 798 aa16.1■□□□□ 0.17
TCD2YKL027W THI12P42883 340 aa16.09■□□□□ 0.17
TCD2YKL027W THI5P43534 340 aa16.09■□□□□ 0.17
TCD2YKL027W THI11P47183 340 aa16.09■□□□□ 0.17
TCD2YKL027W THI13Q07748 340 aa16.09■□□□□ 0.17
TCD2YKL027W NAP1P25293 417 aaKnown RBP16.06■□□□□ 0.16
TCD2YKL027W TY3B-IQ7LHG5 1498 aaKnown RBP16.03■□□□□ 0.16
TCD2YKL027W YNR029CP53729 429 aaKnown RBP16.02■□□□□ 0.16
TCD2YKL027W TAF8Q03750 510 aa16■□□□□ 0.15
TCD2YKL027W KIP3P53086 805 aaKnown RBP15.94■□□□□ 0.14
TCD2YKL027W SPE2P21182 396 aa15.91■□□□□ 0.14
TCD2YKL027W SCT1P32784 759 aa15.91■□□□□ 0.14
TCD2YKL027W YLR419WQ06698 1435 aaKnown RBP15.89■□□□□ 0.13
TCD2YKL027W POL5P39985 1022 aaKnown RBP15.87■□□□□ 0.13
TCD2YKL027W ORC1P54784 914 aaPredicted RBP15.85■□□□□ 0.13
TCD2YKL027W RCM1P53972 490 aa15.81■□□□□ 0.12
TCD2YKL027W CPS1P27614 576 aa15.79■□□□□ 0.12
TCD2YKL027W PSK1P31374 1356 aa15.77■□□□□ 0.11
TCD2YKL027W PPH3P32345 308 aa15.74■□□□□ 0.11
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms