RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W MIF2P35201 549 aa7.41□□□□□ -1.22
HIT1YJR055W PTC4P38089 393 aa7.41□□□□□ -1.22
HIT1YJR055W YEL023CP39992 682 aa7.41□□□□□ -1.22
HIT1YJR055W EDS1P38073 919 aa7.4□□□□□ -1.22
HIT1YJR055W GRE2Q12068 342 aaKnown RBP7.4□□□□□ -1.22
HIT1YJR055W SAP30P38429 201 aa7.38□□□□□ -1.23
HIT1YJR055W YDL129WQ07555 291 aa7.38□□□□□ -1.23
HIT1YJR055W PTC3P34221 468 aaKnown RBP7.37□□□□□ -1.23
HIT1YJR055W COQ8P27697 501 aa7.35□□□□□ -1.23
HIT1YJR055W GUT1P32190 709 aa7.34□□□□□ -1.23
HIT1YJR055W ATH1P48016 1211 aa7.34□□□□□ -1.23
HIT1YJR055W NST1P53935 1240 aa7.28□□□□□ -1.24
HIT1YJR055W CHL1P22516 861 aaPredicted RBP7.27□□□□□ -1.25
HIT1YJR055W PML39Q03760 334 aa7.27□□□□□ -1.25
HIT1YJR055W PRE3P38624 215 aa7.26□□□□□ -1.25
HIT1YJR055W SOL3P38858 249 aa7.26□□□□□ -1.25
HIT1YJR055W YDR344CQ05510 147 aa7.23□□□□□ -1.25
HIT1YJR055W NOP53Q12080 455 aaKnown RBP7.23□□□□□ -1.25
HIT1YJR055W BCK2P33306 851 aa7.21□□□□□ -1.26
HIT1YJR055W MPH3P0CE00 602 aa7.2□□□□□ -1.26
HIT1YJR055W AI4P03878 556 aa7.19□□□□□ -1.26
HIT1YJR055W MID1P41821 548 aa7.19□□□□□ -1.26
HIT1YJR055W ILV3P39522 585 aaKnown RBP7.18□□□□□ -1.26
HIT1YJR055W YGR273CP53329 174 aa7.16□□□□□ -1.26
HIT1YJR055W ELP4Q02884 456 aaKnown RBP7.16□□□□□ -1.26
HIT1YJR055W ARH1P48360 493 aa7.14□□□□□ -1.27
HIT1YJR055W VRP1P37370 817 aa7.1□□□□□ -1.27
HIT1YJR055W PEX29Q03370 554 aa7.1□□□□□ -1.27
HIT1YJR055W SET1P38827 1080 aaKnown RBP7.08□□□□□ -1.28
HIT1YJR055W XDJ1P39102 459 aa7.06□□□□□ -1.28
HIT1YJR055W SPT23P35210 1082 aa7.05□□□□□ -1.28
HIT1YJR055W SLI15P38283 698 aa7.05□□□□□ -1.28
HIT1YJR055W HAP5Q02516 242 aa7.05□□□□□ -1.28
HIT1YJR055W MPC54Q08550 464 aa7.05□□□□□ -1.28
HIT1YJR055W KEX1P09620 729 aa7.02□□□□□ -1.29
HIT1YJR055W BNI4P53858 892 aa7.01□□□□□ -1.29
HIT1YJR055W NMA111P53920 997 aa6.99□□□□□ -1.29
HIT1YJR055W DPL1Q05567 589 aa6.98□□□□□ -1.29
HIT1YJR055W UBP14P38237 781 aaKnown RBP6.97□□□□□ -1.29
HIT1YJR055W YML082WQ04533 649 aaKnown RBP6.97□□□□□ -1.29
HIT1YJR055W YLR326WQ06170 240 aaKnown RBP6.97□□□□□ -1.29
HIT1YJR055W PTC2P39966 464 aaKnown RBP6.96□□□□□ -1.3
HIT1YJR055W VHR2P40041 505 aa6.95□□□□□ -1.3
HIT1YJR055W CDC73Q06697 393 aa6.92□□□□□ -1.3
HIT1YJR055W PCS60P38137 543 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
HIT1YJR055W ISU2Q12056 156 aa6.91□□□□□ -1.3
HIT1YJR055W DPS1P04802 557 aaKnown RBP6.9□□□□□ -1.3
HIT1YJR055W RAD54P32863 898 aa6.89□□□□□ -1.31
HIT1YJR055W IFH1P39520 1085 aa6.89□□□□□ -1.31
HIT1YJR055W YPR015CQ12531 247 aa6.88□□□□□ -1.31
HIT1YJR055W RAM1P22007 431 aa6.87□□□□□ -1.31
HIT1YJR055W YDR090CQ03193 310 aa6.86□□□□□ -1.31
HIT1YJR055W YPR148CQ06523 435 aa6.86□□□□□ -1.31
HIT1YJR055W RGA2Q06407 1009 aa6.83□□□□□ -1.32
HIT1YJR055W PDR1P12383 1068 aa6.82□□□□□ -1.32
HIT1YJR055W RPP1BP10622 106 aaKnown RBP6.81□□□□□ -1.32
HIT1YJR055W REF2P42073 533 aaPredicted RBP6.8□□□□□ -1.32
HIT1YJR055W KIC1P38692 1080 aa6.79□□□□□ -1.32
HIT1YJR055W VPS70P47161 811 aa6.76□□□□□ -1.33
HIT1YJR055W SRC1Q03707 834 aa6.76□□□□□ -1.33
HIT1YJR055W GAP1P19145 602 aaPredicted RBP6.75□□□□□ -1.33
HIT1YJR055W GYP1Q08484 637 aa6.75□□□□□ -1.33
HIT1YJR055W RAS1P01119 309 aa6.73□□□□□ -1.33
HIT1YJR055W PEX21P50091 288 aa6.72□□□□□ -1.33
HIT1YJR055W CSC1Q06538 782 aa6.72□□□□□ -1.33
HIT1YJR055W YRR1Q12172 810 aa6.72□□□□□ -1.33
HIT1YJR055W ORC6P38826 435 aa6.71□□□□□ -1.34
HIT1YJR055W SAS4Q04003 481 aa6.71□□□□□ -1.34
HIT1YJR055W TFB4Q12004 338 aa6.71□□□□□ -1.34
HIT1YJR055W COX6P00427 148 aa6.7□□□□□ -1.34
HIT1YJR055W SDH2P21801 266 aa6.7□□□□□ -1.34
HIT1YJR055W BUD20Q08004 166 aaPredicted RBP6.69□□□□□ -1.34
HIT1YJR055W MAK21Q12176 1025 aaKnown RBP6.69□□□□□ -1.34
HIT1YJR055W AMS1P22855 1083 aa6.68□□□□□ -1.34
HIT1YJR055W TUM1Q08686 304 aaKnown RBP6.68□□□□□ -1.34
HIT1YJR055W STR2P47164 639 aa6.67□□□□□ -1.34
HIT1YJR055W NUD1P32336 851 aa6.65□□□□□ -1.34
HIT1YJR055W ISM1P48526 1002 aa6.65□□□□□ -1.34
HIT1YJR055W PRT1P06103 763 aaKnown RBP6.64□□□□□ -1.35
HIT1YJR055W MVP1P40959 511 aaKnown RBP6.63□□□□□ -1.35
HIT1YJR055W RGR1P19263 1082 aa6.6□□□□□ -1.35
HIT1YJR055W MRF1P30775 413 aaPredicted RBP6.6□□□□□ -1.35
HIT1YJR055W CKB1P43639 278 aa6.6□□□□□ -1.35
HIT1YJR055W YEL077CQ3E7X8 1277 aa6.6□□□□□ -1.35
HIT1YJR055W NPL4P33755 580 aa6.59□□□□□ -1.35
HIT1YJR055W YPR109WQ06104 294 aa6.59□□□□□ -1.35
HIT1YJR055W PBS2P08018 668 aa6.58□□□□□ -1.36
HIT1YJR055W TY1A-DR4O74302 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-HP0C2I4 478 aaKnown RBP6.57□□□□□ -1.36
HIT1YJR055W TY1A-AP0CX57 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-PR1P0CX58 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-ORP0CX59 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-PR2P0CX60 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-DR5P0CX65 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-ER2P0CX66 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-GR3P0CX67 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-LR1P0CX68 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-MR2P0CX69 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-JR2P47099 440 aa6.57□□□□□ -1.36
HIT1YJR055W TY1A-DR1Q03856 440 aa6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 60.9 ms