RNA–Protein interactions for RNA: YJL100W

LSB6, Transcript of Type II phosphatidylinositol 4-kinase, yeastyeast

Gene LSB6, Length 1,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB6YJL100W TY1B-BLQ12490 1755 aa12.85□□□□□ -0.35
LSB6YJL100W MLP2P40457 1679 aa12.82□□□□□ -0.36
LSB6YJL100W RTT106P40161 455 aa12.81□□□□□ -0.36
LSB6YJL100W NUP159P40477 1460 aa12.8□□□□□ -0.36
LSB6YJL100W SSM4P40318 1319 aa12.8□□□□□ -0.36
LSB6YJL100W SNT2P53127 1403 aa12.78□□□□□ -0.36
LSB6YJL100W NUP170P38181 1502 aa12.78□□□□□ -0.36
LSB6YJL100W PDR15Q04182 1529 aaKnown RBP12.77□□□□□ -0.37
LSB6YJL100W NTE1Q04958 1679 aa12.77□□□□□ -0.37
LSB6YJL100W IFH1P39520 1085 aa12.74□□□□□ -0.37
LSB6YJL100W RPO21P04050 1733 aaKnown RBP12.73□□□□□ -0.37
LSB6YJL100W ULS1Q08562 1619 aa12.71□□□□□ -0.37
LSB6YJL100W GEA1P47102 1408 aaPredicted RBP12.7□□□□□ -0.38
LSB6YJL100W MET10P39692 1035 aa12.7□□□□□ -0.38
LSB6YJL100W NSR1P27476 414 aaKnown RBP RIP-Chip data12.68□□□□□ -0.38not detected
LSB6YJL100W GEA2P39993 1459 aaKnown RBP12.67□□□□□ -0.38
LSB6YJL100W LTE1P07866 1435 aa12.66□□□□□ -0.38
LSB6YJL100W YRF1-1P0CX20 1796 aa12.66□□□□□ -0.38
LSB6YJL100W YRF1-5P0CX21 1796 aa12.66□□□□□ -0.38
LSB6YJL100W YRF1-8P0CX22 1796 aa12.66□□□□□ -0.38
LSB6YJL100W VPS15P22219 1454 aa12.63□□□□□ -0.39
LSB6YJL100W TY3B-GQ99315 1547 aa12.6□□□□□ -0.39
LSB6YJL100W PDR12Q02785 1511 aa12.54□□□□□ -0.4
LSB6YJL100W IRC20Q06554 1556 aa12.53□□□□□ -0.4
LSB6YJL100W NUP157P40064 1391 aaKnown RBP12.51□□□□□ -0.41
LSB6YJL100W SPO14P36126 1683 aa12.51□□□□□ -0.41
LSB6YJL100W CAT8P39113 1433 aa12.5□□□□□ -0.41
LSB6YJL100W NOP2P40991 618 aaKnown RBP12.48□□□□□ -0.41
LSB6YJL100W DRS2P39524 1355 aa12.48□□□□□ -0.41
LSB6YJL100W YBT1P32386 1661 aa12.47□□□□□ -0.41
LSB6YJL100W GDB1Q06625 1536 aa12.46□□□□□ -0.41
LSB6YJL100W ITT1Q04638 464 aa12.46□□□□□ -0.41
LSB6YJL100W PDR10P51533 1564 aa12.44□□□□□ -0.42
LSB6YJL100W CKB1P43639 278 aa12.41□□□□□ -0.42
LSB6YJL100W IQG1Q12280 1495 aa12.41□□□□□ -0.42
LSB6YJL100W POL5P39985 1022 aaKnown RBP12.4□□□□□ -0.42
LSB6YJL100W BUD3P25558 1636 aa12.38□□□□□ -0.43
LSB6YJL100W BNI1P41832 1953 aa12.37□□□□□ -0.43
LSB6YJL100W ARO1P08566 1588 aaKnown RBP12.31□□□□□ -0.44
LSB6YJL100W MMS1Q06211 1407 aa12.3□□□□□ -0.44
LSB6YJL100W SRB8P25648 1427 aa12.3□□□□□ -0.44
LSB6YJL100W TRM3Q07527 1436 aa12.28□□□□□ -0.44
LSB6YJL100W ENP1P38333 483 aaKnown RBP12.27□□□□□ -0.44
LSB6YJL100W SPT7P35177 1332 aa12.27□□□□□ -0.45
LSB6YJL100W YSP2Q06681 1438 aa12.26□□□□□ -0.45
LSB6YJL100W DOP1Q03921 1698 aa12.24□□□□□ -0.45
LSB6YJL100W BUD21Q08492 214 aaPredicted RBP12.23□□□□□ -0.45
LSB6YJL100W BNR1P40450 1375 aa12.23□□□□□ -0.45
LSB6YJL100W SEC7P11075 2009 aaKnown RBP12.18□□□□□ -0.46
LSB6YJL100W GCN2P15442 1659 aa12.18□□□□□ -0.46
LSB6YJL100W ABP1P15891 592 aaKnown RBP12.14□□□□□ -0.47
LSB6YJL100W SEC3P33332 1336 aaKnown RBP12.13□□□□□ -0.47
LSB6YJL100W CHC1P22137 1653 aaKnown RBP12.11□□□□□ -0.47
LSB6YJL100W DNF2Q12675 1612 aa12.08□□□□□ -0.48
LSB6YJL100W LEU3P08638 886 aa12.07□□□□□ -0.48
LSB6YJL100W NOP7P53261 605 aaKnown RBP12.05□□□□□ -0.48
LSB6YJL100W URN1Q06525 465 aaKnown RBP12.05□□□□□ -0.48
LSB6YJL100W ORC1P54784 914 aaPredicted RBP12.04□□□□□ -0.48
LSB6YJL100W PRS1P32895 427 aaKnown RBP12□□□□□ -0.49
LSB6YJL100W YAP3P38749 330 aa12□□□□□ -0.49
LSB6YJL100W PSD2P53037 1138 aaKnown RBP12□□□□□ -0.49
LSB6YJL100W PDR5P33302 1511 aaKnown RBP11.98□□□□□ -0.49
LSB6YJL100W MHP1P43638 1398 aa11.95□□□□□ -0.5
LSB6YJL100W YOR093CQ12275 1648 aa11.94□□□□□ -0.5
LSB6YJL100W MIF2P35201 549 aa11.92□□□□□ -0.5
LSB6YJL100W PAF1P38351 445 aa11.92□□□□□ -0.5
LSB6YJL100W IPL1P38991 367 aa11.92□□□□□ -0.5
LSB6YJL100W YLR419WQ06698 1435 aaKnown RBP11.89□□□□□ -0.51
LSB6YJL100W BFR2Q06631 534 aaKnown RBP11.88□□□□□ -0.51
LSB6YJL100W NUP188P52593 1655 aaKnown RBP11.88□□□□□ -0.51
LSB6YJL100W TYS1P36421 394 aaKnown RBP11.84□□□□□ -0.51
LSB6YJL100W TY3B-IQ7LHG5 1498 aaKnown RBP11.84□□□□□ -0.51
LSB6YJL100W VMR1P38735 1592 aa11.83□□□□□ -0.52
LSB6YJL100W IML1P47170 1584 aa11.83□□□□□ -0.52
LSB6YJL100W PDR11P40550 1411 aa11.82□□□□□ -0.52
LSB6YJL100W NST1P53935 1240 aa11.81□□□□□ -0.52
LSB6YJL100W DNF3Q12674 1656 aa11.8□□□□□ -0.52
LSB6YJL100W TAF5P38129 798 aa11.79□□□□□ -0.52
LSB6YJL100W MAK10Q02197 733 aa11.78□□□□□ -0.52
LSB6YJL100W PDS5Q04264 1277 aa11.78□□□□□ -0.52
LSB6YJL100W RAV1P47104 1357 aa11.77□□□□□ -0.53
LSB6YJL100W RTC1Q08281 1341 aa11.74□□□□□ -0.53
LSB6YJL100W CFT1Q06632 1357 aaKnown RBP11.73□□□□□ -0.53
LSB6YJL100W HAP1P0CE41 1502 aa11.72□□□□□ -0.53
LSB6YJL100W KIP3P53086 805 aaKnown RBP11.72□□□□□ -0.53
LSB6YJL100W FUN12P39730 1002 aaKnown RBP11.7□□□□□ -0.54
LSB6YJL100W NUP192P47054 1683 aa11.69□□□□□ -0.54
LSB6YJL100W ESL2P36168 1195 aa11.63□□□□□ -0.55
LSB6YJL100W MRX12P47084 519 aa11.62□□□□□ -0.55
LSB6YJL100W ALD4P46367 519 aaKnown RBP11.6□□□□□ -0.55
LSB6YJL100W SPE2P21182 396 aa11.56□□□□□ -0.56
LSB6YJL100W YFR006WP43590 535 aa11.56□□□□□ -0.56
LSB6YJL100W CAB1Q04430 367 aa11.56□□□□□ -0.56
LSB6YJL100W RAD9P14737 1309 aa11.55□□□□□ -0.56
LSB6YJL100W NAP1P25293 417 aaKnown RBP11.55□□□□□ -0.56
LSB6YJL100W RTG3P38165 486 aa11.55□□□□□ -0.56
LSB6YJL100W YMR196WQ04336 1088 aa11.55□□□□□ -0.56
LSB6YJL100W BCK1Q01389 1478 aa11.55□□□□□ -0.56
LSB6YJL100W TFA1P36100 482 aa11.54□□□□□ -0.56
LSB6YJL100W RIA1P53893 1110 aa11.54□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms