RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C TY1B-BLQ12490 1755 aa14.93□□□□□ -0.02
MET28YIR017C RTT106P40161 455 aa14.89□□□□□ -0.03
MET28YIR017C NTE1Q04958 1679 aa14.88□□□□□ -0.03
MET28YIR017C SNT2P53127 1403 aa14.87□□□□□ -0.03
MET28YIR017C LTE1P07866 1435 aa14.84□□□□□ -0.03
MET28YIR017C RPO21P04050 1733 aaKnown RBP14.83□□□□□ -0.04
MET28YIR017C MLP2P40457 1679 aa14.79□□□□□ -0.04
MET28YIR017C MET10P39692 1035 aa14.78□□□□□ -0.04
MET28YIR017C PDR15Q04182 1529 aaKnown RBP14.77□□□□□ -0.04
MET28YIR017C VPS15P22219 1454 aa14.76□□□□□ -0.05
MET28YIR017C IFH1P39520 1085 aa14.76□□□□□ -0.05
MET28YIR017C YRF1-1P0CX20 1796 aa14.75□□□□□ -0.05
MET28YIR017C YRF1-5P0CX21 1796 aa14.75□□□□□ -0.05
MET28YIR017C YRF1-8P0CX22 1796 aa14.75□□□□□ -0.05
MET28YIR017C GEA2P39993 1459 aaKnown RBP14.75□□□□□ -0.05
MET28YIR017C ULS1Q08562 1619 aa14.73□□□□□ -0.05
MET28YIR017C GEA1P47102 1408 aaPredicted RBP14.64□□□□□ -0.07
MET28YIR017C PDR12Q02785 1511 aa14.61□□□□□ -0.07
MET28YIR017C DRS2P39524 1355 aa14.6□□□□□ -0.07
MET28YIR017C ITT1Q04638 464 aa14.59□□□□□ -0.07
MET28YIR017C IRC20Q06554 1556 aa14.58□□□□□ -0.08
MET28YIR017C NUP157P40064 1391 aaKnown RBP14.57□□□□□ -0.08
MET28YIR017C SPO14P36126 1683 aa14.56□□□□□ -0.08
MET28YIR017C GDB1Q06625 1536 aa14.53□□□□□ -0.08
MET28YIR017C CAT8P39113 1433 aa14.53□□□□□ -0.08
MET28YIR017C NUP170P38181 1502 aa14.51□□□□□ -0.09
MET28YIR017C BNI1P41832 1953 aa14.49□□□□□ -0.09
MET28YIR017C IQG1Q12280 1495 aa14.47□□□□□ -0.09
MET28YIR017C PDR10P51533 1564 aa14.47□□□□□ -0.09
MET28YIR017C TY3B-GQ99315 1547 aa14.45□□□□□ -0.1
MET28YIR017C MMS1Q06211 1407 aa14.42□□□□□ -0.1
MET28YIR017C BUD3P25558 1636 aa14.42□□□□□ -0.1
MET28YIR017C CKB1P43639 278 aa14.41□□□□□ -0.1
MET28YIR017C YBT1P32386 1661 aa14.37□□□□□ -0.11
MET28YIR017C IKI3Q06706 1349 aaKnown RBP14.37□□□□□ -0.11
MET28YIR017C TRM3Q07527 1436 aa14.35□□□□□ -0.11
MET28YIR017C ARO1P08566 1588 aaKnown RBP14.3□□□□□ -0.12
MET28YIR017C DOP1Q03921 1698 aa14.27□□□□□ -0.12
MET28YIR017C SRB8P25648 1427 aa14.27□□□□□ -0.12
MET28YIR017C YSP2Q06681 1438 aa14.26□□□□□ -0.13
MET28YIR017C ABP1P15891 592 aaKnown RBP14.24□□□□□ -0.13
MET28YIR017C BNR1P40450 1375 aa14.22□□□□□ -0.13
MET28YIR017C BUD21Q08492 214 aaPredicted RBP14.18□□□□□ -0.14
MET28YIR017C SEC7P11075 2009 aaKnown RBP14.15□□□□□ -0.14
MET28YIR017C SSM4P40318 1319 aa14.14□□□□□ -0.15
MET28YIR017C DNF2Q12675 1612 aa14.13□□□□□ -0.15
MET28YIR017C CHC1P22137 1653 aaKnown RBP14.11□□□□□ -0.15
MET28YIR017C MIF2P35201 549 aa14.05□□□□□ -0.16
MET28YIR017C URN1Q06525 465 aaKnown RBP14.04□□□□□ -0.16
MET28YIR017C YAP3P38749 330 aa13.97□□□□□ -0.17
MET28YIR017C YOR093CQ12275 1648 aa13.93□□□□□ -0.18
MET28YIR017C IPL1P38991 367 aa13.85□□□□□ -0.19
MET28YIR017C GCN2P15442 1659 aa13.84□□□□□ -0.19
MET28YIR017C NUP188P52593 1655 aaKnown RBP13.82□□□□□ -0.2
MET28YIR017C PAF1P38351 445 aa13.8□□□□□ -0.2
MET28YIR017C DNF3Q12674 1656 aa13.78□□□□□ -0.2
MET28YIR017C TYS1P36421 394 aaKnown RBP13.77□□□□□ -0.21
MET28YIR017C VMR1P38735 1592 aa13.75□□□□□ -0.21
MET28YIR017C IML1P47170 1584 aa13.75□□□□□ -0.21
MET28YIR017C MAK10Q02197 733 aa13.75□□□□□ -0.21
MET28YIR017C PDR5P33302 1511 aaKnown RBP13.74□□□□□ -0.21
MET28YIR017C NOP7P53261 605 aaKnown RBP13.72□□□□□ -0.21
MET28YIR017C BFR2Q06631 534 aaKnown RBP13.69□□□□□ -0.22
MET28YIR017C HAP1P0CE41 1502 aa13.67□□□□□ -0.22
MET28YIR017C PDR11P40550 1411 aa13.65□□□□□ -0.22
MET28YIR017C RAV1P47104 1357 aa13.64□□□□□ -0.23
MET28YIR017C YFR006WP43590 535 aa13.61□□□□□ -0.23
MET28YIR017C RTC1Q08281 1341 aa13.58□□□□□ -0.24
MET28YIR017C MRX12P47084 519 aa13.5□□□□□ -0.25
MET28YIR017C YMR196WQ04336 1088 aa13.49□□□□□ -0.25
MET28YIR017C ESL2P36168 1195 aa13.46□□□□□ -0.25
MET28YIR017C ALD4P46367 519 aaKnown RBP13.45□□□□□ -0.26
MET28YIR017C RIA1P53893 1110 aa13.43□□□□□ -0.26
MET28YIR017C TY1B-NL2Q99337 1749 aaKnown RBP13.43□□□□□ -0.26
MET28YIR017C TAF5P38129 798 aa13.42□□□□□ -0.26
MET28YIR017C KRE5P22023 1365 aa13.42□□□□□ -0.26
MET28YIR017C BCK1Q01389 1478 aa13.42□□□□□ -0.26
MET28YIR017C RAD9P14737 1309 aa13.4□□□□□ -0.26
MET28YIR017C NAP1P25293 417 aaKnown RBP13.4□□□□□ -0.26
MET28YIR017C CAB1Q04430 367 aa13.4□□□□□ -0.26
MET28YIR017C USO1P25386 1790 aa13.39□□□□□ -0.27
MET28YIR017C CFT1Q06632 1357 aaKnown RBP13.37□□□□□ -0.27
MET28YIR017C THI12P42883 340 aa13.37□□□□□ -0.27
MET28YIR017C THI5P43534 340 aa13.37□□□□□ -0.27
MET28YIR017C THI11P47183 340 aa13.37□□□□□ -0.27
MET28YIR017C THI13Q07748 340 aa13.37□□□□□ -0.27
MET28YIR017C NUP192P47054 1683 aa13.36□□□□□ -0.27
MET28YIR017C TAF8Q03750 510 aa13.32□□□□□ -0.28
MET28YIR017C YNR029CP53729 429 aaKnown RBP13.31□□□□□ -0.28
MET28YIR017C KIP3P53086 805 aaKnown RBP13.28□□□□□ -0.28
MET28YIR017C SCT1P32784 759 aa13.27□□□□□ -0.29
MET28YIR017C ORC1P54784 914 aaPredicted RBP13.27□□□□□ -0.29
MET28YIR017C POL5P39985 1022 aaKnown RBP13.25□□□□□ -0.29
MET28YIR017C SPE2P21182 396 aa13.24□□□□□ -0.29
MET28YIR017C TY3B-IQ7LHG5 1498 aaKnown RBP13.23□□□□□ -0.29
MET28YIR017C RCM1P53972 490 aa13.16□□□□□ -0.3
MET28YIR017C YLR419WQ06698 1435 aaKnown RBP13.14□□□□□ -0.31
MET28YIR017C CPS1P27614 576 aa13.12□□□□□ -0.31
MET28YIR017C CHZ1P40019 153 aaPredicted RBP13.12□□□□□ -0.31
MET28YIR017C PPH3P32345 308 aa13.08□□□□□ -0.32
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms