RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	YFR016C	P43597	1233 aa	Known RBP	2.89	□□□□□ -1.95
STH1	YIL126W	PSD2	P53037	1138 aa	Known RBP	2.89	□□□□□ -1.95
STH1	YIL126W	LAM6	Q08001	693 aa		2.89	□□□□□ -1.95
STH1	YIL126W	YOR093C	Q12275	1648 aa		2.89	□□□□□ -1.95
STH1	YIL126W	RPO31	P04051	1460 aa		2.89	□□□□□ -1.95
STH1	YIL126W	SAP155	P43612	1002 aa		2.88	□□□□□ -1.95
STH1	YIL126W	HO	P09932	586 aa		2.88	□□□□□ -1.95
STH1	YIL126W	YGL015C	P33199	130 aa		2.88	□□□□□ -1.95
STH1	YIL126W	ENV9	Q08651	330 aa		2.88	□□□□□ -1.95
STH1	YIL126W	SPT7	P35177	1332 aa		2.88	□□□□□ -1.95
STH1	YIL126W	MET10	P39692	1035 aa		2.88	□□□□□ -1.95
STH1	YIL126W	ALD2	P47771	506 aa		2.88	□□□□□ -1.95
STH1	YIL126W	STH1	P32597	1359 aa		2.87	□□□□□ -1.95
STH1	YIL126W	OXP1	P28273	1286 aa		2.87	□□□□□ -1.95
STH1	YIL126W	DNF2	Q12675	1612 aa		2.86	□□□□□ -1.95
STH1	YIL126W	POL5	P39985	1022 aa	Known RBP	2.86	□□□□□ -1.95
STH1	YIL126W	MMS1	Q06211	1407 aa		2.86	□□□□□ -1.95
STH1	YIL126W	YPR148C	Q06523	435 aa		2.85	□□□□□ -1.95
STH1	YIL126W	RPS0B	P46654	252 aa	Known RBP	2.85	□□□□□ -1.95
STH1	YIL126W	ALD3	P54114	506 aa		2.85	□□□□□ -1.95
STH1	YIL126W	XRN1	P22147	1528 aa	Known RBP	2.85	□□□□□ -1.95
STH1	YIL126W	TY1B-BR	Q12193	1756 aa		2.85	□□□□□ -1.95
STH1	YIL126W	TY1B-GR3	Q12316	1755 aa		2.85	□□□□□ -1.95
STH1	YIL126W	TY1B-OR	Q92393	1755 aa		2.85	□□□□□ -1.95
STH1	YIL126W	RNA1	P11745	407 aa	Known RBP	2.85	□□□□□ -1.95
STH1	YIL126W	PSH1	Q12161	406 aa		2.85	□□□□□ -1.95
STH1	YIL126W	GTT3	P39996	337 aa		2.84	□□□□□ -1.95
STH1	YIL126W	SKI3	P17883	1432 aa	Known RBP	2.84	□□□□□ -1.95
STH1	YIL126W	UBP10	P53874	792 aa	Predicted RBP	2.84	□□□□□ -1.96
STH1	YIL126W	EDE1	P34216	1381 aa		2.84	□□□□□ -1.96
STH1	YIL126W	YEF3	P16521	1044 aa	Known RBP	2.83	□□□□□ -1.96
STH1	YIL126W	CWC22	P53333	577 aa	Known RBP	2.83	□□□□□ -1.96
STH1	YIL126W	TRM732	Q03496	1420 aa		2.83	□□□□□ -1.96
STH1	YIL126W	IFH1	P39520	1085 aa		2.83	□□□□□ -1.96
STH1	YIL126W	TIF4632	P39936	914 aa	Known RBP	2.83	□□□□□ -1.96
STH1	YIL126W	YPK9	Q12697	1472 aa		2.83	□□□□□ -1.96
STH1	YIL126W	NOP7	P53261	605 aa	Known RBP	2.83	□□□□□ -1.96
STH1	YIL126W	TAF5	P38129	798 aa		2.82	□□□□□ -1.96
STH1	YIL126W	SSP1	P38871	571 aa		2.82	□□□□□ -1.96
STH1	YIL126W	KRI1	P42846	591 aa	Known RBP	2.82	□□□□□ -1.96
STH1	YIL126W	ZDS2	P54786	942 aa		2.82	□□□□□ -1.96
STH1	YIL126W	SUP35	P05453	685 aa	Known RBP	2.82	□□□□□ -1.96
STH1	YIL126W	SEN54	Q02825	467 aa	Predicted RBP	2.82	□□□□□ -1.96
STH1	YIL126W	CLB5	P30283	435 aa		2.82	□□□□□ -1.96
STH1	YIL126W	DEF1	P35732	738 aa	Known RBP	2.82	□□□□□ -1.96
STH1	YIL126W	YAP3	P38749	330 aa		2.82	□□□□□ -1.96
STH1	YIL126W	RSM7	P47150	247 aa		2.82	□□□□□ -1.96
STH1	YIL126W	CHD1	P32657	1468 aa		2.82	□□□□□ -1.96
STH1	YIL126W	RSC30	P38781	883 aa		2.81	□□□□□ -1.96
STH1	YIL126W	YRB30	P53107	440 aa	Predicted RBP	2.81	□□□□□ -1.96
STH1	YIL126W	FUN12	P39730	1002 aa	Known RBP	2.81	□□□□□ -1.96
STH1	YIL126W	MEC3	Q02574	474 aa		2.81	□□□□□ -1.96
STH1	YIL126W	CSE1	P33307	960 aa		2.8	□□□□□ -1.96
STH1	YIL126W	BUD21	Q08492	214 aa	Predicted RBP	2.8	□□□□□ -1.96
STH1	YIL126W	PAN1	P32521	1480 aa		2.8	□□□□□ -1.96
STH1	YIL126W	NTE1	Q04958	1679 aa		2.8	□□□□□ -1.96
STH1	YIL126W	BCH2	P36122	765 aa		2.8	□□□□□ -1.96
STH1	YIL126W	RRD1	P40454	393 aa	Known RBP	2.8	□□□□□ -1.96
STH1	YIL126W	SPB4	P25808	606 aa	Predicted RBP	2.8	□□□□□ -1.96
STH1	YIL126W	RLP24	Q07915	199 aa	Known RBP	2.8	□□□□□ -1.96
STH1	YIL126W	TY2B-LR1	P0C2J3	1770 aa		2.8	□□□□□ -1.96
STH1	YIL126W	TY2B-F	P0CX63	1770 aa		2.8	□□□□□ -1.96
STH1	YIL126W	TY2B-GR2	P0CX64	1770 aa		2.8	□□□□□ -1.96
STH1	YIL126W	TY2B-C	P25384	1770 aa		2.8	□□□□□ -1.96
STH1	YIL126W	TY2B-DR2	Q03494	1770 aa		2.8	□□□□□ -1.96
STH1	YIL126W	TY1B-DR1	Q03855	1755 aa		2.8	□□□□□ -1.96
STH1	YIL126W	TY2B-DR3	Q07791	1770 aa	Known RBP	2.8	□□□□□ -1.96
STH1	YIL126W	TY2B-OR1	Q12113	1770 aa		2.8	□□□□□ -1.96
STH1	YIL126W	TY2B-DR1	Q12472	1770 aa		2.8	□□□□□ -1.96
STH1	YIL126W	TY2B-OR2	Q12501	1770 aa		2.8	□□□□□ -1.96
STH1	YIL126W	MAP2	P38174	421 aa	Known RBP	2.79	□□□□□ -1.96
STH1	YIL126W	SCC2	Q04002	1493 aa		2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-H	O13535	1793 aa		2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-DR5	P0C2I2	1755 aa		2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-DR6	P0C2I3	1755 aa		2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-LR2	P0C2I5	1755 aa		2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-PR2	P0C2J0	1756 aa		2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-JR1	P47098	1755 aa		2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-ML2	Q03434	1755 aa	Known RBP	2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-ER1	Q03612	1755 aa		2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-ML1	Q04711	1755 aa	Known RBP	2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-GR2	Q12269	1755 aa		2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-OL	Q12273	1755 aa		2.79	□□□□□ -1.96
STH1	YIL126W	TY1B-PL	Q12414	1755 aa	Known RBP	2.79	□□□□□ -1.96
STH1	YIL126W	TRM3	Q07527	1436 aa		2.79	□□□□□ -1.96
STH1	YIL126W	SMC4	Q12267	1418 aa		2.79	□□□□□ -1.96
STH1	YIL126W	CKB1	P43639	278 aa		2.79	□□□□□ -1.96
STH1	YIL126W	PIB1	Q06651	286 aa		2.79	□□□□□ -1.96
STH1	YIL126W	PEX21	P50091	288 aa		2.78	□□□□□ -1.96
STH1	YIL126W	SCY1	P53009	804 aa		2.78	□□□□□ -1.96
STH1	YIL126W	YAF9	P53930	226 aa		2.78	□□□□□ -1.96
STH1	YIL126W	YLR271W	Q06152	274 aa		2.78	□□□□□ -1.96
STH1	YIL126W	BBC1	P47068	1157 aa		2.78	□□□□□ -1.96
STH1	YIL126W	HPC2	Q01448	625 aa		2.78	□□□□□ -1.97
STH1	YIL126W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	2.77	□□□□□ -1.97	not detected
STH1	YIL126W	MAK10	Q02197	733 aa		2.77	□□□□□ -1.97
STH1	YIL126W	DOP1	Q03921	1698 aa		2.77	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms