RNA–Protein interactions for RNA: YHL038C

CBP2, Required for splicing of the group I intron bI5 of the COB pre-mRNA, yeastyeast

Gene CBP2, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBP2YHL038C HTA2P04912 132 aa6.79□□□□□ -1.32
CBP2YHL038C STS1P38637 319 aa6.77□□□□□ -1.33
CBP2YHL038C ELP4Q02884 456 aaKnown RBP6.77□□□□□ -1.33
CBP2YHL038C GYP5Q12344 894 aa6.77□□□□□ -1.33
CBP2YHL038C YEL023CP39992 682 aa6.77□□□□□ -1.33
CBP2YHL038C YDR344CQ05510 147 aa6.77□□□□□ -1.33
CBP2YHL038C DCW1P36091 449 aa6.73□□□□□ -1.33
CBP2YHL038C RTG3P38165 486 aa6.69□□□□□ -1.34
CBP2YHL038C PML39Q03760 334 aa6.66□□□□□ -1.34
CBP2YHL038C ARH1P48360 493 aa6.64□□□□□ -1.35
CBP2YHL038C SPT23P35210 1082 aa6.58□□□□□ -1.36
CBP2YHL038C RQC2Q12532 1038 aaKnown RBP6.55□□□□□ -1.36
CBP2YHL038C MID1P41821 548 aa6.48□□□□□ -1.37
CBP2YHL038C CST9Q06032 482 aa6.48□□□□□ -1.37
CBP2YHL038C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
CBP2YHL038C RCR1P38212 213 aa6.47□□□□□ -1.37
CBP2YHL038C YML082WQ04533 649 aaKnown RBP6.46□□□□□ -1.38
CBP2YHL038C GRE2Q12068 342 aaKnown RBP6.46□□□□□ -1.38
CBP2YHL038C YPL062WQ02781 134 aa6.45□□□□□ -1.38
CBP2YHL038C RAS1P01119 309 aa6.45□□□□□ -1.38
CBP2YHL038C HAP5Q02516 242 aa6.45□□□□□ -1.38
CBP2YHL038C PEX29Q03370 554 aa6.45□□□□□ -1.38
CBP2YHL038C BNI4P53858 892 aa6.44□□□□□ -1.38
CBP2YHL038C TRK1P12685 1235 aa6.42□□□□□ -1.38
CBP2YHL038C PTC2P39966 464 aaKnown RBP6.42□□□□□ -1.38
CBP2YHL038C MGA2P40578 1113 aa6.38□□□□□ -1.39
CBP2YHL038C SSP1P38871 571 aa6.35□□□□□ -1.39
CBP2YHL038C NST1P53935 1240 aa6.35□□□□□ -1.39
CBP2YHL038C ATH1P48016 1211 aa6.34□□□□□ -1.39
CBP2YHL038C GUT1P32190 709 aa6.34□□□□□ -1.39
CBP2YHL038C AMS1P22855 1083 aa6.29□□□□□ -1.4
CBP2YHL038C AI4P03878 556 aa6.28□□□□□ -1.4
CBP2YHL038C MPH3P0CE00 602 aa6.28□□□□□ -1.4
CBP2YHL038C MPC54Q08550 464 aa6.25□□□□□ -1.41
CBP2YHL038C PTC3P34221 468 aaKnown RBP6.24□□□□□ -1.41
CBP2YHL038C SOL3P38858 249 aa6.24□□□□□ -1.41
CBP2YHL038C MIF2P35201 549 aa6.22□□□□□ -1.41
CBP2YHL038C ILV3P39522 585 aaKnown RBP6.21□□□□□ -1.42
CBP2YHL038C NMA111P53920 997 aa6.21□□□□□ -1.42
CBP2YHL038C YPR015CQ12531 247 aa6.2□□□□□ -1.42
CBP2YHL038C EDS1P38073 919 aa6.17□□□□□ -1.42
CBP2YHL038C GYP1Q08484 637 aa6.17□□□□□ -1.42
CBP2YHL038C GBP2P25555 427 aaKnown RBP RIP-Chip data6.15□□□□□ -1.43not detected
CBP2YHL038C RAM1P22007 431 aa6.14□□□□□ -1.43
CBP2YHL038C GAR1P28007 205 aaKnown RBP6.13□□□□□ -1.43
CBP2YHL038C SDH2P21801 266 aa6.11□□□□□ -1.43
CBP2YHL038C DPL1Q05567 589 aa6.11□□□□□ -1.43
CBP2YHL038C MAK11P20484 414 aaKnown RBP6.1□□□□□ -1.43
CBP2YHL038C YEL077CQ3E7X8 1277 aa6.1□□□□□ -1.43
CBP2YHL038C BRE2P43132 505 aa6.09□□□□□ -1.43
CBP2YHL038C SAS4Q04003 481 aa6.09□□□□□ -1.43
CBP2YHL038C SLI15P38283 698 aa6.06□□□□□ -1.44
CBP2YHL038C DMA1P38823 416 aa6.06□□□□□ -1.44
CBP2YHL038C GCR2Q01722 534 aa6.05□□□□□ -1.44
CBP2YHL038C YGR273CP53329 174 aa6.04□□□□□ -1.44
CBP2YHL038C ISU2Q12056 156 aa6.04□□□□□ -1.44
CBP2YHL038C COQ8P27697 501 aa6□□□□□ -1.45
CBP2YHL038C MRF1P30775 413 aaPredicted RBP5.98□□□□□ -1.45
CBP2YHL038C RAM2P29703 316 aa5.94□□□□□ -1.46
CBP2YHL038C PDR1P12383 1068 aa5.93□□□□□ -1.46
CBP2YHL038C AIR1P40507 360 aaKnown RBP5.92□□□□□ -1.46
CBP2YHL038C MET22P32179 357 aa5.9□□□□□ -1.47
CBP2YHL038C ENV9Q08651 330 aa5.88□□□□□ -1.47
CBP2YHL038C CDC73Q06697 393 aa5.88□□□□□ -1.47
CBP2YHL038C NOP53Q12080 455 aaKnown RBP5.88□□□□□ -1.47
CBP2YHL038C CLA4P48562 842 aa5.85□□□□□ -1.47
CBP2YHL038C ERG12P07277 443 aa5.85□□□□□ -1.47
CBP2YHL038C MTC5Q03897 1148 aa5.83□□□□□ -1.48
CBP2YHL038C KEX1P09620 729 aa5.81□□□□□ -1.48
CBP2YHL038C PRT1P06103 763 aaKnown RBP5.81□□□□□ -1.48
CBP2YHL038C CST6P40535 587 aa5.81□□□□□ -1.48
CBP2YHL038C BUD20Q08004 166 aaPredicted RBP5.8□□□□□ -1.48
CBP2YHL038C CDC4P07834 779 aa5.79□□□□□ -1.48
CBP2YHL038C YDR444WQ04093 687 aa5.79□□□□□ -1.48
CBP2YHL038C YDL176WQ12027 708 aa5.78□□□□□ -1.48
CBP2YHL038C TAF7Q05021 590 aa5.76□□□□□ -1.49
CBP2YHL038C LAM6Q08001 693 aa5.76□□□□□ -1.49
CBP2YHL038C LCB5Q06147 687 aaKnown RBP5.73□□□□□ -1.49
CBP2YHL038C RPP1BP10622 106 aaKnown RBP5.71□□□□□ -1.5
CBP2YHL038C STR2P47164 639 aa5.69□□□□□ -1.5
CBP2YHL038C LEO1P38439 464 aa5.68□□□□□ -1.5
CBP2YHL038C FRK1Q03002 865 aaPredicted RBP5.68□□□□□ -1.5
CBP2YHL038C ISM1P48526 1002 aa5.66□□□□□ -1.5
CBP2YHL038C YRR1Q12172 810 aa5.65□□□□□ -1.5
CBP2YHL038C HED1Q03937 162 aa5.64□□□□□ -1.51
CBP2YHL038C YLR326WQ06170 240 aaKnown RBP5.64□□□□□ -1.51
CBP2YHL038C SPT16P32558 1035 aaKnown RBP5.64□□□□□ -1.51
CBP2YHL038C PCS60P38137 543 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
CBP2YHL038C BDP1P46678 594 aa5.62□□□□□ -1.51
CBP2YHL038C UBP14P38237 781 aaKnown RBP5.61□□□□□ -1.51
CBP2YHL038C NUD1P32336 851 aa5.6□□□□□ -1.51
CBP2YHL038C RAD54P32863 898 aa5.59□□□□□ -1.51
CBP2YHL038C PEX21P50091 288 aa5.59□□□□□ -1.51
CBP2YHL038C RRD1P40454 393 aaKnown RBP5.58□□□□□ -1.52
CBP2YHL038C NPL4P33755 580 aa5.57□□□□□ -1.52
CBP2YHL038C ASH1P34233 588 aa5.57□□□□□ -1.52
CBP2YHL038C VHR2P40041 505 aa5.57□□□□□ -1.52
CBP2YHL038C SAS10Q12136 610 aaPredicted RBP5.57□□□□□ -1.52
CBP2YHL038C TY1A-DR4O74302 440 aa5.56□□□□□ -1.52
CBP2YHL038C TY1A-HP0C2I4 478 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms