RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W TIF11P38912 153 aaKnown RBP8.6□□□□□ -1.03
RPN12YFR052W TY1B-BRQ12193 1756 aa8.6□□□□□ -1.03
RPN12YFR052W TY1B-GR3Q12316 1755 aa8.6□□□□□ -1.03
RPN12YFR052W TY1B-ORQ92393 1755 aa8.6□□□□□ -1.03
RPN12YFR052W FKH1P40466 484 aa8.59□□□□□ -1.03
RPN12YFR052W ESC1Q03661 1658 aaKnown RBP8.58□□□□□ -1.04
RPN12YFR052W TY2B-BQ12491 1770 aa8.58□□□□□ -1.04
RPN12YFR052W TY1B-DR3Q99231 1755 aa8.57□□□□□ -1.04
RPN12YFR052W TY1B-HO13535 1793 aa8.54□□□□□ -1.04
RPN12YFR052W TY1B-DR5P0C2I2 1755 aa8.54□□□□□ -1.04
RPN12YFR052W TY1B-DR6P0C2I3 1755 aa8.54□□□□□ -1.04
RPN12YFR052W TY1B-LR2P0C2I5 1755 aa8.54□□□□□ -1.04
RPN12YFR052W TY1B-LR3P0C2I6 1755 aaKnown RBP8.54□□□□□ -1.04
RPN12YFR052W TY1B-PR1P0C2I9 1755 aaKnown RBP8.54□□□□□ -1.04
RPN12YFR052W TY1B-PR2P0C2J0 1756 aa8.54□□□□□ -1.04
RPN12YFR052W TY1B-PR3P0C2J1 1755 aaKnown RBP8.54□□□□□ -1.04
RPN12YFR052W TY1B-JR1P47098 1755 aa8.54□□□□□ -1.04
RPN12YFR052W TY1B-ML2Q03434 1755 aaKnown RBP8.54□□□□□ -1.04
RPN12YFR052W TY1B-ER1Q03612 1755 aa8.54□□□□□ -1.04
RPN12YFR052W TY1B-ML1Q04711 1755 aaKnown RBP8.54□□□□□ -1.04
RPN12YFR052W TY1B-GR2Q12269 1755 aa8.54□□□□□ -1.04
RPN12YFR052W TY1B-OLQ12273 1755 aa8.54□□□□□ -1.04
RPN12YFR052W TY1B-PLQ12414 1755 aaKnown RBP8.54□□□□□ -1.04
RPN12YFR052W GTT3P39996 337 aa8.54□□□□□ -1.04
RPN12YFR052W RPO31P04051 1460 aa8.52□□□□□ -1.05
RPN12YFR052W CDC25P04821 1589 aa8.51□□□□□ -1.05
RPN12YFR052W IOC2Q12072 812 aa8.5□□□□□ -1.05
RPN12YFR052W RKR1Q04781 1562 aa8.49□□□□□ -1.05
RPN12YFR052W MRM1P25270 412 aa8.48□□□□□ -1.05
RPN12YFR052W PIB1Q06651 286 aa8.48□□□□□ -1.05
RPN12YFR052W ULI1P43604 169 aa8.46□□□□□ -1.06
RPN12YFR052W LDB19Q12502 818 aa8.45□□□□□ -1.06
RPN12YFR052W YJL171CP46992 396 aa8.44□□□□□ -1.06
RPN12YFR052W RPA190P10964 1664 aaKnown RBP8.43□□□□□ -1.06
RPN12YFR052W DNF1P32660 1571 aa8.42□□□□□ -1.06
RPN12YFR052W POL1P13382 1468 aa8.41□□□□□ -1.06
RPN12YFR052W CHD1P32657 1468 aa8.41□□□□□ -1.06
RPN12YFR052W SSP1P38871 571 aa8.41□□□□□ -1.06
RPN12YFR052W MSB4Q12317 492 aa8.4□□□□□ -1.06
RPN12YFR052W TOP2P06786 1428 aaKnown RBP8.39□□□□□ -1.07
RPN12YFR052W RQC2Q12532 1038 aaKnown RBP8.38□□□□□ -1.07
RPN12YFR052W STU1P38198 1513 aa8.38□□□□□ -1.07
RPN12YFR052W VPS29P38759 282 aa8.37□□□□□ -1.07
RPN12YFR052W TY1B-JR2P47100 1755 aaKnown RBP8.37□□□□□ -1.07
RPN12YFR052W TY1B-ER2Q03619 1755 aa8.37□□□□□ -1.07
RPN12YFR052W TY1B-MR1Q04214 1755 aa8.37□□□□□ -1.07
RPN12YFR052W TY1B-MR2Q04670 1755 aaKnown RBP8.37□□□□□ -1.07
RPN12YFR052W TY1B-LR1Q12088 1755 aaKnown RBP8.37□□□□□ -1.07
RPN12YFR052W TY1B-NL1Q12112 1755 aa8.37□□□□□ -1.07
RPN12YFR052W TY1B-GR1Q12141 1755 aa8.37□□□□□ -1.07
RPN12YFR052W TY1B-BLQ12490 1755 aa8.37□□□□□ -1.07
RPN12YFR052W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
RPN12YFR052W PAN1P32521 1480 aa8.36□□□□□ -1.07
RPN12YFR052W YOR1P53049 1477 aa8.34□□□□□ -1.07
RPN12YFR052W CST9Q06032 482 aa8.34□□□□□ -1.07
RPN12YFR052W YOL036WQ08206 761 aa8.34□□□□□ -1.07
RPN12YFR052W EAP1P36041 632 aaKnown RBP8.33□□□□□ -1.08
RPN12YFR052W YMR1P47147 688 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
RPN12YFR052W BMT6Q12291 365 aa8.33□□□□□ -1.08
RPN12YFR052W MMS22Q06164 1454 aa8.32□□□□□ -1.08
RPN12YFR052W NTE1Q04958 1679 aa8.31□□□□□ -1.08
RPN12YFR052W DBP1P24784 617 aaKnown RBP8.31□□□□□ -1.08
RPN12YFR052W YRF1-1P0CX20 1796 aa8.3□□□□□ -1.08
RPN12YFR052W YRF1-5P0CX21 1796 aa8.3□□□□□ -1.08
RPN12YFR052W YRF1-8P0CX22 1796 aa8.3□□□□□ -1.08
RPN12YFR052W SET4P42948 560 aa8.3□□□□□ -1.08
RPN12YFR052W TRP5P00931 707 aaKnown RBP8.29□□□□□ -1.08
RPN12YFR052W SMC4Q12267 1418 aa8.29□□□□□ -1.08
RPN12YFR052W STS1P38637 319 aa8.28□□□□□ -1.08
RPN12YFR052W SAM3Q08986 587 aa8.28□□□□□ -1.08
RPN12YFR052W RPO21P04050 1733 aaKnown RBP8.27□□□□□ -1.09
RPN12YFR052W VMA1P17255 1071 aaKnown RBP8.27□□□□□ -1.09
RPN12YFR052W RTG1P32607 177 aa8.27□□□□□ -1.09
RPN12YFR052W RTG3P38165 486 aa8.27□□□□□ -1.09
RPN12YFR052W MGA2P40578 1113 aa8.27□□□□□ -1.09
RPN12YFR052W YFR006WP43590 535 aa8.26□□□□□ -1.09
RPN12YFR052W MET5P47169 1442 aa8.25□□□□□ -1.09
RPN12YFR052W SPP41P38904 1435 aa8.23□□□□□ -1.09
RPN12YFR052W NCR1Q12200 1170 aa8.23□□□□□ -1.09
RPN12YFR052W VTH1P40438 1549 aa8.23□□□□□ -1.09
RPN12YFR052W VTH2P40890 1549 aa8.23□□□□□ -1.09
RPN12YFR052W YNL035CP53962 389 aaKnown RBP8.22□□□□□ -1.09
RPN12YFR052W TRM732Q03496 1420 aa8.21□□□□□ -1.09
RPN12YFR052W SEC61P32915 480 aa8.21□□□□□ -1.1
RPN12YFR052W RCR1P38212 213 aa8.19□□□□□ -1.1
RPN12YFR052W MLP2P40457 1679 aa8.18□□□□□ -1.1
RPN12YFR052W BNI1P41832 1953 aa8.17□□□□□ -1.1
RPN12YFR052W MYO4P32492 1471 aa8.15□□□□□ -1.1
RPN12YFR052W NUP159P40477 1460 aa8.15□□□□□ -1.1
RPN12YFR052W TSC11P40061 1430 aa8.15□□□□□ -1.1
RPN12YFR052W DAN4P47179 1161 aa8.14□□□□□ -1.11
RPN12YFR052W SNQ2P32568 1501 aaKnown RBP8.13□□□□□ -1.11
RPN12YFR052W LTE1P07866 1435 aa8.12□□□□□ -1.11
RPN12YFR052W ULS1Q08562 1619 aa8.11□□□□□ -1.11
RPN12YFR052W YTA7P40340 1379 aa8.1□□□□□ -1.11
RPN12YFR052W VPS15P22219 1454 aa8.1□□□□□ -1.11
RPN12YFR052W GEA2P39993 1459 aaKnown RBP8.09□□□□□ -1.11
RPN12YFR052W SPO14P36126 1683 aa8.08□□□□□ -1.12
RPN12YFR052W ABP1P15891 592 aaKnown RBP8.08□□□□□ -1.12
RPN12YFR052W JIP4Q03361 876 aa8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms