RNA–Protein interactions for RNA: YFL029C

CAK1, Transcript of Cyclin-dependent kinase-activating kinase, yeastyeast

Gene CAK1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAK1YFL029C SNQ2P32568 1501 aaKnown RBP12.37□□□□□ -0.43
CAK1YFL029C SNT2P53127 1403 aa12.34□□□□□ -0.43
CAK1YFL029C LTE1P07866 1435 aa12.33□□□□□ -0.44
CAK1YFL029C NTE1Q04958 1679 aa12.32□□□□□ -0.44
CAK1YFL029C TAF7Q05021 590 aa12.3□□□□□ -0.44
CAK1YFL029C RTT106P40161 455 aa12.28□□□□□ -0.44
CAK1YFL029C RPO21P04050 1733 aaKnown RBP12.28□□□□□ -0.44
CAK1YFL029C VPS15P22219 1454 aa12.26□□□□□ -0.45
CAK1YFL029C YRF1-1P0CX20 1796 aa12.25□□□□□ -0.45
CAK1YFL029C YRF1-5P0CX21 1796 aa12.25□□□□□ -0.45
CAK1YFL029C YRF1-8P0CX22 1796 aa12.25□□□□□ -0.45
CAK1YFL029C PRY3P47033 881 aa12.24□□□□□ -0.45
CAK1YFL029C MET10P39692 1035 aa12.23□□□□□ -0.45
CAK1YFL029C GEA2P39993 1459 aaKnown RBP12.22□□□□□ -0.45
CAK1YFL029C PDR15Q04182 1529 aaKnown RBP12.21□□□□□ -0.46
CAK1YFL029C IFH1P39520 1085 aa12.2□□□□□ -0.46
CAK1YFL029C ULS1Q08562 1619 aa12.19□□□□□ -0.46
CAK1YFL029C MLP2P40457 1679 aa12.18□□□□□ -0.46
CAK1YFL029C ITT1Q04638 464 aa12.17□□□□□ -0.46
CAK1YFL029C PRI1P10363 409 aa12.15□□□□□ -0.46
CAK1YFL029C DRS2P39524 1355 aa12.12□□□□□ -0.47
CAK1YFL029C PDR12Q02785 1511 aa12.11□□□□□ -0.47
CAK1YFL029C GEA1P47102 1408 aaPredicted RBP12.1□□□□□ -0.47
CAK1YFL029C BNI1P41832 1953 aa12.09□□□□□ -0.47
CAK1YFL029C IRC20Q06554 1556 aa12.08□□□□□ -0.48
CAK1YFL029C NUP157P40064 1391 aaKnown RBP12.07□□□□□ -0.48
CAK1YFL029C SPO14P36126 1683 aa12.07□□□□□ -0.48
CAK1YFL029C AAD16Q02895 342 aa12.07□□□□□ -0.48
CAK1YFL029C GDB1Q06625 1536 aa12.04□□□□□ -0.48
CAK1YFL029C NUP170P38181 1502 aa12.02□□□□□ -0.48
CAK1YFL029C MMS1Q06211 1407 aa12□□□□□ -0.49
CAK1YFL029C CAT8P39113 1433 aa11.99□□□□□ -0.49
CAK1YFL029C IQG1Q12280 1495 aa11.99□□□□□ -0.49
CAK1YFL029C PDR10P51533 1564 aa11.99□□□□□ -0.49
CAK1YFL029C TY3B-GQ99315 1547 aa11.97□□□□□ -0.49
CAK1YFL029C CKB1P43639 278 aa11.9□□□□□ -0.5
CAK1YFL029C BUD3P25558 1636 aa11.89□□□□□ -0.51
CAK1YFL029C TRM3Q07527 1436 aa11.88□□□□□ -0.51
CAK1YFL029C ISW2Q08773 1120 aa11.88□□□□□ -0.51
CAK1YFL029C YBT1P32386 1661 aa11.87□□□□□ -0.51
CAK1YFL029C ABP1P15891 592 aaKnown RBP11.85□□□□□ -0.51
CAK1YFL029C ARO1P08566 1588 aaKnown RBP11.84□□□□□ -0.51
CAK1YFL029C YSP2Q06681 1438 aa11.83□□□□□ -0.52
CAK1YFL029C RPG1P38249 964 aaKnown RBP11.82□□□□□ -0.52
CAK1YFL029C IKI3Q06706 1349 aaKnown RBP11.81□□□□□ -0.52
CAK1YFL029C DOP1Q03921 1698 aa11.81□□□□□ -0.52
CAK1YFL029C BNR1P40450 1375 aa11.77□□□□□ -0.53
CAK1YFL029C SRB8P25648 1427 aa11.77□□□□□ -0.53
CAK1YFL029C MIF2P35201 549 aa11.76□□□□□ -0.53
CAK1YFL029C DIP2Q12220 943 aaPredicted RBP11.76□□□□□ -0.53
CAK1YFL029C DNF2Q12675 1612 aa11.74□□□□□ -0.53
CAK1YFL029C SEC7P11075 2009 aaKnown RBP11.7□□□□□ -0.54
CAK1YFL029C BUD21Q08492 214 aaPredicted RBP11.69□□□□□ -0.54
CAK1YFL029C SSM4P40318 1319 aa11.68□□□□□ -0.54
CAK1YFL029C CHC1P22137 1653 aaKnown RBP11.67□□□□□ -0.54
CAK1YFL029C YCK3P39962 524 aa11.61□□□□□ -0.55
CAK1YFL029C YAP3P38749 330 aa11.58□□□□□ -0.56
CAK1YFL029C URN1Q06525 465 aaKnown RBP11.57□□□□□ -0.56
CAK1YFL029C YOR093CQ12275 1648 aa11.56□□□□□ -0.56
CAK1YFL029C TSR3Q12094 313 aaKnown RBP11.52□□□□□ -0.57
CAK1YFL029C IPL1P38991 367 aa11.47□□□□□ -0.57
CAK1YFL029C TYS1P36421 394 aaKnown RBP11.43□□□□□ -0.58
CAK1YFL029C DNF3Q12674 1656 aa11.43□□□□□ -0.58
CAK1YFL029C HAA1Q12753 694 aaKnown RBP11.42□□□□□ -0.58
CAK1YFL029C NUP188P52593 1655 aaKnown RBP11.41□□□□□ -0.58
CAK1YFL029C MAK10Q02197 733 aa11.41□□□□□ -0.58
CAK1YFL029C VMR1P38735 1592 aa11.4□□□□□ -0.58
CAK1YFL029C YFR006WP43590 535 aa11.39□□□□□ -0.59
CAK1YFL029C GCN2P15442 1659 aa11.37□□□□□ -0.59
CAK1YFL029C IML1P47170 1584 aa11.37□□□□□ -0.59
CAK1YFL029C PDR5P33302 1511 aaKnown RBP11.36□□□□□ -0.59
CAK1YFL029C PDR11P40550 1411 aa11.35□□□□□ -0.59
CAK1YFL029C PAF1P38351 445 aa11.33□□□□□ -0.6
CAK1YFL029C AVT3P36062 692 aa11.31□□□□□ -0.6
CAK1YFL029C HAP1P0CE41 1502 aa11.3□□□□□ -0.6
CAK1YFL029C NOP7P53261 605 aaKnown RBP11.26□□□□□ -0.61
CAK1YFL029C BFR2Q06631 534 aaKnown RBP11.26□□□□□ -0.61
CAK1YFL029C RAV1P47104 1357 aa11.25□□□□□ -0.61
CAK1YFL029C RTC1Q08281 1341 aa11.2□□□□□ -0.62
CAK1YFL029C YMR196WQ04336 1088 aa11.16□□□□□ -0.62
CAK1YFL029C MRX12P47084 519 aa11.13□□□□□ -0.63
CAK1YFL029C KRE5P22023 1365 aa11.12□□□□□ -0.63
CAK1YFL029C THI12P42883 340 aa11.11□□□□□ -0.63
CAK1YFL029C THI5P43534 340 aa11.11□□□□□ -0.63
CAK1YFL029C ALD4P46367 519 aaKnown RBP11.11□□□□□ -0.63
CAK1YFL029C THI11P47183 340 aa11.11□□□□□ -0.63
CAK1YFL029C RIA1P53893 1110 aa11.11□□□□□ -0.63
CAK1YFL029C THI13Q07748 340 aa11.11□□□□□ -0.63
CAK1YFL029C RAD9P14737 1309 aa11.09□□□□□ -0.63
CAK1YFL029C USO1P25386 1790 aa11.09□□□□□ -0.63
CAK1YFL029C CAB1Q04430 367 aa11.09□□□□□ -0.63
CAK1YFL029C TY1B-NL2Q99337 1749 aaKnown RBP11.09□□□□□ -0.63
CAK1YFL029C BCK1Q01389 1478 aa11.08□□□□□ -0.64
CAK1YFL029C CFT1Q06632 1357 aaKnown RBP11.08□□□□□ -0.64
CAK1YFL029C TAF5P38129 798 aa11.07□□□□□ -0.64
CAK1YFL029C ESL2P36168 1195 aa11.06□□□□□ -0.64
CAK1YFL029C NUP192P47054 1683 aa11.04□□□□□ -0.64
CAK1YFL029C YNR029CP53729 429 aaKnown RBP11.03□□□□□ -0.64
CAK1YFL029C RPL17AP05740 184 aaKnown RBP11.02□□□□□ -0.65
CAK1YFL029C RPL17BP46990 184 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms