RNA–Protein interactions for RNA: YFL002W-B

YFL002W-B, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YFL002W-B, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-BYFL002W-B SOL3P38858 249 aa7.52□□□□□ -1.2
YFL002W-BYFL002W-B YPR148CQ06523 435 aa7.52□□□□□ -1.2
YFL002W-BYFL002W-B GUT1P32190 709 aa7.52□□□□□ -1.21
YFL002W-BYFL002W-B NOP53Q12080 455 aaKnown RBP7.51□□□□□ -1.21
YFL002W-BYFL002W-B HTA1P04911 132 aaKnown RBP7.49□□□□□ -1.21
YFL002W-BYFL002W-B HTA2P04912 132 aa7.49□□□□□ -1.21
YFL002W-BYFL002W-B NST1P53935 1240 aa7.47□□□□□ -1.21
YFL002W-BYFL002W-B EAP1P36041 632 aaKnown RBP7.46□□□□□ -1.22
YFL002W-BYFL002W-B YEL023CP39992 682 aa7.46□□□□□ -1.22
YFL002W-BYFL002W-B ILV3P39522 585 aaKnown RBP7.45□□□□□ -1.22
YFL002W-BYFL002W-B YGR273CP53329 174 aa7.45□□□□□ -1.22
YFL002W-BYFL002W-B IFH1P39520 1085 aa7.44□□□□□ -1.22
YFL002W-BYFL002W-B VHR2P40041 505 aa7.44□□□□□ -1.22
YFL002W-BYFL002W-B ABP1P15891 592 aaKnown RBP7.43□□□□□ -1.22
YFL002W-BYFL002W-B RTG1P32607 177 aa7.42□□□□□ -1.22
YFL002W-BYFL002W-B NCR1Q12200 1170 aa7.4□□□□□ -1.22
YFL002W-BYFL002W-B DAN4P47179 1161 aa7.39□□□□□ -1.23
YFL002W-BYFL002W-B YLR326WQ06170 240 aaKnown RBP7.39□□□□□ -1.23
YFL002W-BYFL002W-B UBP14P38237 781 aaKnown RBP7.38□□□□□ -1.23
YFL002W-BYFL002W-B PTC4P38089 393 aa7.37□□□□□ -1.23
YFL002W-BYFL002W-B REF2P42073 533 aaPredicted RBP7.37□□□□□ -1.23
YFL002W-BYFL002W-B YNL035CP53962 389 aaKnown RBP7.37□□□□□ -1.23
YFL002W-BYFL002W-B KEX1P09620 729 aa7.36□□□□□ -1.23
YFL002W-BYFL002W-B SEC61P32915 480 aa7.35□□□□□ -1.23
YFL002W-BYFL002W-B MPH3P0CE00 602 aa7.34□□□□□ -1.23
YFL002W-BYFL002W-B CKB1P43639 278 aa7.34□□□□□ -1.23
YFL002W-BYFL002W-B YDR090CQ03193 310 aa7.34□□□□□ -1.23
YFL002W-BYFL002W-B PBS2P08018 668 aa7.33□□□□□ -1.24
YFL002W-BYFL002W-B SPB4P25808 606 aaPredicted RBP7.33□□□□□ -1.24
YFL002W-BYFL002W-B JIP4Q03361 876 aa7.33□□□□□ -1.24
YFL002W-BYFL002W-B BCK2P33306 851 aa7.32□□□□□ -1.24
YFL002W-BYFL002W-B PCS60P38137 543 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
YFL002W-BYFL002W-B MID1P41821 548 aa7.32□□□□□ -1.24
YFL002W-BYFL002W-B AI4P03878 556 aa7.31□□□□□ -1.24
YFL002W-BYFL002W-B PML39Q03760 334 aa7.31□□□□□ -1.24
YFL002W-BYFL002W-B RAD54P32863 898 aa7.28□□□□□ -1.24
YFL002W-BYFL002W-B SLI15P38283 698 aa7.28□□□□□ -1.24
YFL002W-BYFL002W-B YDR344CQ05510 147 aa7.27□□□□□ -1.24
YFL002W-BYFL002W-B DSF2P38213 736 aa7.25□□□□□ -1.25
YFL002W-BYFL002W-B COX6P00427 148 aa7.24□□□□□ -1.25
YFL002W-BYFL002W-B SAP30P38429 201 aa7.24□□□□□ -1.25
YFL002W-BYFL002W-B KIC1P38692 1080 aa7.23□□□□□ -1.25
YFL002W-BYFL002W-B IES2P40154 320 aa7.23□□□□□ -1.25
YFL002W-BYFL002W-B TFG1P41895 735 aaPredicted RBP7.23□□□□□ -1.25
YFL002W-BYFL002W-B CDC73Q06697 393 aa7.23□□□□□ -1.25
YFL002W-BYFL002W-B MAM3Q12296 706 aa7.23□□□□□ -1.25
YFL002W-BYFL002W-B CHL1P22516 861 aaPredicted RBP7.22□□□□□ -1.25
YFL002W-BYFL002W-B YDL129WQ07555 291 aa7.22□□□□□ -1.25
YFL002W-BYFL002W-B RGA2Q06407 1009 aa7.2□□□□□ -1.26
YFL002W-BYFL002W-B PEX29Q03370 554 aa7.19□□□□□ -1.26
YFL002W-BYFL002W-B DIT2P21595 489 aa7.18□□□□□ -1.26
YFL002W-BYFL002W-B MPC54Q08550 464 aa7.18□□□□□ -1.26
YFL002W-BYFL002W-B MAK21Q12176 1025 aaKnown RBP7.18□□□□□ -1.26
YFL002W-BYFL002W-B NUP42P49686 430 aaKnown RBP7.17□□□□□ -1.26
YFL002W-BYFL002W-B ORC6P38826 435 aa7.16□□□□□ -1.26
YFL002W-BYFL002W-B PRE3P38624 215 aa7.15□□□□□ -1.26
YFL002W-BYFL002W-B LEU3P08638 886 aa7.13□□□□□ -1.27
YFL002W-BYFL002W-B DPL1Q05567 589 aa7.12□□□□□ -1.27
YFL002W-BYFL002W-B GLC3P32775 704 aa7.1□□□□□ -1.27
YFL002W-BYFL002W-B NMA111P53920 997 aa7.1□□□□□ -1.27
YFL002W-BYFL002W-B XDJ1P39102 459 aa7.09□□□□□ -1.27
YFL002W-BYFL002W-B GAP1P19145 602 aaPredicted RBP7.08□□□□□ -1.28
YFL002W-BYFL002W-B ELP4Q02884 456 aaKnown RBP7.07□□□□□ -1.28
YFL002W-BYFL002W-B PDR1P12383 1068 aa7.06□□□□□ -1.28
YFL002W-BYFL002W-B RGR1P19263 1082 aa7.06□□□□□ -1.28
YFL002W-BYFL002W-B ARH1P48360 493 aa7.06□□□□□ -1.28
YFL002W-BYFL002W-B MVP1P40959 511 aaKnown RBP7.05□□□□□ -1.28
YFL002W-BYFL002W-B HAP5Q02516 242 aa7.04□□□□□ -1.28
YFL002W-BYFL002W-B TUM1Q08686 304 aaKnown RBP7.03□□□□□ -1.28
YFL002W-BYFL002W-B YRR1Q12172 810 aa7.03□□□□□ -1.28
YFL002W-BYFL002W-B PSE1P32337 1089 aaKnown RBP7.02□□□□□ -1.28
YFL002W-BYFL002W-B PEX21P50091 288 aa7.02□□□□□ -1.28
YFL002W-BYFL002W-B YNR021WP53723 404 aaKnown RBP7.02□□□□□ -1.28
YFL002W-BYFL002W-B ISU2Q12056 156 aa7.02□□□□□ -1.28
YFL002W-BYFL002W-B YPR109WQ06104 294 aa7.01□□□□□ -1.29
YFL002W-BYFL002W-B CSC1Q06538 782 aa7.01□□□□□ -1.29
YFL002W-BYFL002W-B RPP1BP10622 106 aaKnown RBP7.01□□□□□ -1.29
YFL002W-BYFL002W-B VRP1P37370 817 aa7.01□□□□□ -1.29
YFL002W-BYFL002W-B YPR015CQ12531 247 aa6.99□□□□□ -1.29
YFL002W-BYFL002W-B DPS1P04802 557 aaKnown RBP6.98□□□□□ -1.29
YFL002W-BYFL002W-B ATF2P53296 535 aa6.98□□□□□ -1.29
YFL002W-BYFL002W-B TFB4Q12004 338 aa6.98□□□□□ -1.29
YFL002W-BYFL002W-B RPN1P38764 993 aaKnown RBP6.97□□□□□ -1.29
YFL002W-BYFL002W-B RGA1P39083 1007 aa6.97□□□□□ -1.29
YFL002W-BYFL002W-B RAM1P22007 431 aa6.96□□□□□ -1.3
YFL002W-BYFL002W-B SPT23P35210 1082 aa6.96□□□□□ -1.3
YFL002W-BYFL002W-B BNI4P53858 892 aa6.95□□□□□ -1.3
YFL002W-BYFL002W-B KIN1P13185 1064 aa6.94□□□□□ -1.3
YFL002W-BYFL002W-B TEA1P47988 759 aa6.94□□□□□ -1.3
YFL002W-BYFL002W-B NUD1P32336 851 aa6.93□□□□□ -1.3
YFL002W-BYFL002W-B PTC2P39966 464 aaKnown RBP6.93□□□□□ -1.3
YFL002W-BYFL002W-B STR2P47164 639 aa6.93□□□□□ -1.3
YFL002W-BYFL002W-B ISM1P48526 1002 aa6.92□□□□□ -1.3
YFL002W-BYFL002W-B NIS1P53939 407 aa6.92□□□□□ -1.3
YFL002W-BYFL002W-B ERF2Q06551 359 aa6.92□□□□□ -1.3
YFL002W-BYFL002W-B AIM7Q12156 149 aa6.9□□□□□ -1.3
YFL002W-BYFL002W-B KEX2P13134 814 aa6.89□□□□□ -1.31
YFL002W-BYFL002W-B SCJ1P25303 377 aa6.89□□□□□ -1.31
YFL002W-BYFL002W-B LEO1P38439 464 aa6.89□□□□□ -1.31
YFL002W-BYFL002W-B TYW1Q08960 810 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms