RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W CST9Q06032 482 aa8.87□□□□□ -0.99
DEG1YFL001W GYP5Q12344 894 aa8.84□□□□□ -0.99
DEG1YFL001W SAS10Q12136 610 aaPredicted RBP8.83□□□□□ -1
DEG1YFL001W MGA2P40578 1113 aa8.81□□□□□ -1
DEG1YFL001W DCW1P36091 449 aa8.8□□□□□ -1
DEG1YFL001W PTC4P38089 393 aa8.8□□□□□ -1
DEG1YFL001W HTA1P04911 132 aaKnown RBP8.8□□□□□ -1
DEG1YFL001W HTA2P04912 132 aa8.8□□□□□ -1
DEG1YFL001W VRP1P37370 817 aa8.8□□□□□ -1
DEG1YFL001W RCR1P38212 213 aa8.8□□□□□ -1
DEG1YFL001W LEU3P08638 886 aa8.79□□□□□ -1
DEG1YFL001W XDJ1P39102 459 aa8.79□□□□□ -1
DEG1YFL001W YEL023CP39992 682 aa8.79□□□□□ -1
DEG1YFL001W YDR344CQ05510 147 aa8.79□□□□□ -1
DEG1YFL001W DPS1P04802 557 aaKnown RBP8.66□□□□□ -1.02
DEG1YFL001W ELP4Q02884 456 aaKnown RBP8.65□□□□□ -1.02
DEG1YFL001W PML39Q03760 334 aa8.65□□□□□ -1.02
DEG1YFL001W RGA2Q06407 1009 aa8.65□□□□□ -1.02
DEG1YFL001W GRE2Q12068 342 aaKnown RBP8.55□□□□□ -1.04
DEG1YFL001W ARH1P48360 493 aa8.54□□□□□ -1.04
DEG1YFL001W SRC1Q03707 834 aa8.52□□□□□ -1.05
DEG1YFL001W MID1P41821 548 aa8.51□□□□□ -1.05
DEG1YFL001W RPN1P38764 993 aaKnown RBP8.48□□□□□ -1.05
DEG1YFL001W RAM2P29703 316 aa8.46□□□□□ -1.06
DEG1YFL001W RGA1P39083 1007 aa8.46□□□□□ -1.06
DEG1YFL001W GUT1P32190 709 aa8.45□□□□□ -1.06
DEG1YFL001W ATH1P48016 1211 aa8.45□□□□□ -1.06
DEG1YFL001W SPT23P35210 1082 aa8.44□□□□□ -1.06
DEG1YFL001W NST1P53935 1240 aa8.44□□□□□ -1.06
DEG1YFL001W SET1P38827 1080 aaKnown RBP8.41□□□□□ -1.06
DEG1YFL001W YPR148CQ06523 435 aa8.4□□□□□ -1.06
DEG1YFL001W PTC3P34221 468 aaKnown RBP8.39□□□□□ -1.07
DEG1YFL001W MIF2P35201 549 aa8.39□□□□□ -1.07
DEG1YFL001W CKB1P43639 278 aa8.39□□□□□ -1.07
DEG1YFL001W EDS1P38073 919 aa8.38□□□□□ -1.07
DEG1YFL001W MAK11P20484 414 aaKnown RBP8.37□□□□□ -1.07
DEG1YFL001W SOL3P38858 249 aa8.36□□□□□ -1.07
DEG1YFL001W IFH1P39520 1085 aa8.35□□□□□ -1.07
DEG1YFL001W PEX29Q03370 554 aa8.35□□□□□ -1.07
DEG1YFL001W SPB4P25808 606 aaPredicted RBP8.34□□□□□ -1.07
DEG1YFL001W VPS70P47161 811 aa8.34□□□□□ -1.07
DEG1YFL001W DMA2P53924 522 aa8.34□□□□□ -1.07
DEG1YFL001W HAP5Q02516 242 aa8.33□□□□□ -1.08
DEG1YFL001W MPH3P0CE00 602 aa8.32□□□□□ -1.08
DEG1YFL001W AI4P03878 556 aa8.31□□□□□ -1.08
DEG1YFL001W BNI4P53858 892 aa8.3□□□□□ -1.08
DEG1YFL001W YML082WQ04533 649 aaKnown RBP8.3□□□□□ -1.08
DEG1YFL001W ILV3P39522 585 aaKnown RBP8.29□□□□□ -1.08
DEG1YFL001W PTC2P39966 464 aaKnown RBP8.28□□□□□ -1.08
DEG1YFL001W RAS1P01119 309 aa8.26□□□□□ -1.09
DEG1YFL001W COQ8P27697 501 aa8.24□□□□□ -1.09
DEG1YFL001W DSF2P38213 736 aa8.23□□□□□ -1.09
DEG1YFL001W MPC54Q08550 464 aa8.21□□□□□ -1.1
DEG1YFL001W PBS2P08018 668 aa8.18□□□□□ -1.1
DEG1YFL001W NMA111P53920 997 aa8.17□□□□□ -1.1
DEG1YFL001W RLF2Q12495 606 aa8.15□□□□□ -1.1
DEG1YFL001W YGR273CP53329 174 aa8.14□□□□□ -1.11
DEG1YFL001W YNR021WP53723 404 aaKnown RBP8.14□□□□□ -1.11
DEG1YFL001W NOP53Q12080 455 aaKnown RBP8.14□□□□□ -1.11
DEG1YFL001W YPR015CQ12531 247 aa8.13□□□□□ -1.11
DEG1YFL001W KIN1P13185 1064 aa8.1□□□□□ -1.11
DEG1YFL001W DPL1Q05567 589 aa8.08□□□□□ -1.12
DEG1YFL001W SLI15P38283 698 aa8.07□□□□□ -1.12
DEG1YFL001W REF2P42073 533 aaPredicted RBP8.06□□□□□ -1.12
DEG1YFL001W MAM3Q12296 706 aa8.06□□□□□ -1.12
DEG1YFL001W TRK1P12685 1235 aa8.05□□□□□ -1.12
DEG1YFL001W RAM1P22007 431 aa8.05□□□□□ -1.12
DEG1YFL001W AIM7Q12156 149 aa8.05□□□□□ -1.12
DEG1YFL001W AMS1P22855 1083 aa8.03□□□□□ -1.12
DEG1YFL001W GLC3P32775 704 aa8.03□□□□□ -1.12
DEG1YFL001W IES2P40154 320 aa8.03□□□□□ -1.12
DEG1YFL001W NUP42P49686 430 aaKnown RBP8.02□□□□□ -1.13
DEG1YFL001W ISU2Q12056 156 aa8□□□□□ -1.13
DEG1YFL001W DIT2P21595 489 aa7.99□□□□□ -1.13
DEG1YFL001W HGH1P48362 394 aaKnown RBP7.99□□□□□ -1.13
DEG1YFL001W GYP1Q08484 637 aa7.99□□□□□ -1.13
DEG1YFL001W MAK21Q12176 1025 aaKnown RBP7.99□□□□□ -1.13
DEG1YFL001W SDH2P21801 266 aa7.98□□□□□ -1.13
DEG1YFL001W COX6P00427 148 aa7.95□□□□□ -1.14
DEG1YFL001W YPL062WQ02781 134 aa7.93□□□□□ -1.14
DEG1YFL001W SAS4Q04003 481 aa7.93□□□□□ -1.14
DEG1YFL001W KEX1P09620 729 aa7.91□□□□□ -1.14
DEG1YFL001W GUA1P38625 525 aaKnown RBP7.91□□□□□ -1.14
DEG1YFL001W PDR1P12383 1068 aa7.9□□□□□ -1.14
DEG1YFL001W CDC73Q06697 393 aa7.9□□□□□ -1.14
DEG1YFL001W ATF2P53296 535 aa7.89□□□□□ -1.15
DEG1YFL001W HPC2Q01448 625 aa7.87□□□□□ -1.15
DEG1YFL001W YEL077CQ3E7X8 1277 aa7.84□□□□□ -1.15
DEG1YFL001W YDR090CQ03193 310 aa7.83□□□□□ -1.16
DEG1YFL001W UBP14P38237 781 aaKnown RBP7.81□□□□□ -1.16
DEG1YFL001W VHR2P40041 505 aa7.8□□□□□ -1.16
DEG1YFL001W MRF1P30775 413 aaPredicted RBP7.79□□□□□ -1.16
DEG1YFL001W TFB3Q03290 321 aa7.78□□□□□ -1.16
DEG1YFL001W YLR326WQ06170 240 aaKnown RBP7.78□□□□□ -1.16
DEG1YFL001W RPP1BP10622 106 aaKnown RBP7.76□□□□□ -1.17
DEG1YFL001W PSE1P32337 1089 aaKnown RBP7.75□□□□□ -1.17
DEG1YFL001W BRL1P38770 471 aa7.74□□□□□ -1.17
DEG1YFL001W SSA2P10592 639 aaKnown RBP7.73□□□□□ -1.17
DEG1YFL001W PCS60P38137 543 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17 RIP-Chip
DEG1YFL001W KIC1P38692 1080 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms