RNA–Protein interactions for RNA: YER165W

PAB1, Transcript of Poly(A) binding protein, yeastyeast

Gene PAB1, Length 1,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAB1YER165W GUA1P38625 525 aaKnown RBP12.11□□□□□ -0.47
PAB1YER165W ATG2P53855 1592 aa12.1□□□□□ -0.47
PAB1YER165W EDS1P38073 919 aa12.1□□□□□ -0.47
PAB1YER165W MIF2P35201 549 aa12.09□□□□□ -0.47
PAB1YER165W YMR1P47147 688 aaKnown RBP RIP-Chip data12.07□□□□□ -0.48 RIP-Chip
PAB1YER165W COX6P00427 148 aa12.05□□□□□ -0.48
PAB1YER165W STS1P38637 319 aa12.04□□□□□ -0.48
PAB1YER165W BPT1P14772 1559 aa12.03□□□□□ -0.48
PAB1YER165W UBP10P53874 792 aaPredicted RBP12.03□□□□□ -0.48
PAB1YER165W HPC2Q01448 625 aa12.02□□□□□ -0.49
PAB1YER165W ATF2P53296 535 aa12.01□□□□□ -0.49
PAB1YER165W MAP2P38174 421 aaKnown RBP12□□□□□ -0.49
PAB1YER165W DBP1P24784 617 aaKnown RBP11.95□□□□□ -0.5
PAB1YER165W SSN2P38931 1420 aa11.95□□□□□ -0.5
PAB1YER165W PTC3P34221 468 aaKnown RBP11.94□□□□□ -0.5
PAB1YER165W TAF2P23255 1407 aa11.94□□□□□ -0.5
PAB1YER165W SKI3P17883 1432 aaKnown RBP11.92□□□□□ -0.5
PAB1YER165W YFR006WP43590 535 aa11.92□□□□□ -0.5
PAB1YER165W TFB3Q03290 321 aa11.91□□□□□ -0.5
PAB1YER165W SLX5P32828 619 aaKnown RBP11.9□□□□□ -0.5
PAB1YER165W SIN3P22579 1536 aa11.87□□□□□ -0.51
PAB1YER165W YDR090CQ03193 310 aa11.84□□□□□ -0.51
PAB1YER165W YOR238WQ08634 303 aa11.84□□□□□ -0.51
PAB1YER165W SSK2P53599 1579 aa11.84□□□□□ -0.51
PAB1YER165W BRL1P38770 471 aa11.83□□□□□ -0.52
PAB1YER165W YCF1P39109 1515 aaKnown RBP11.82□□□□□ -0.52
PAB1YER165W UBP14P38237 781 aaKnown RBP11.8□□□□□ -0.52
PAB1YER165W VHR2P40041 505 aa11.8□□□□□ -0.52
PAB1YER165W SSA2P10592 639 aaKnown RBP11.79□□□□□ -0.52
PAB1YER165W YML020WQ03722 664 aa11.78□□□□□ -0.52
PAB1YER165W SSA1P10591 642 aaKnown RBP11.77□□□□□ -0.53
PAB1YER165W PKC1P24583 1151 aa11.77□□□□□ -0.53
PAB1YER165W YLR326WQ06170 240 aaKnown RBP11.74□□□□□ -0.53
PAB1YER165W SUB2Q07478 446 aaKnown RBP11.74□□□□□ -0.53
PAB1YER165W NOP8Q08287 484 aaPredicted RBP11.74□□□□□ -0.53
PAB1YER165W ESP1Q03018 1630 aa11.73□□□□□ -0.53
PAB1YER165W PSE1P32337 1089 aaKnown RBP11.73□□□□□ -0.53
PAB1YER165W GEF1P37020 779 aa11.73□□□□□ -0.53
PAB1YER165W CSN12P47130 423 aa11.73□□□□□ -0.53
PAB1YER165W UFD4P33202 1483 aa11.7□□□□□ -0.54
PAB1YER165W NSR1P27476 414 aaKnown RBP RIP-Chip data11.69□□□□□ -0.54not detected
PAB1YER165W KIC1P38692 1080 aa11.69□□□□□ -0.54
PAB1YER165W BIM1P40013 344 aa11.69□□□□□ -0.54
PAB1YER165W GLN1P32288 370 aaKnown RBP11.68□□□□□ -0.54
PAB1YER165W SLX8P40072 274 aa11.68□□□□□ -0.54
PAB1YER165W VMA1P17255 1071 aaKnown RBP11.67□□□□□ -0.54
PAB1YER165W GUT1P32190 709 aa11.67□□□□□ -0.54
PAB1YER165W ATH1P48016 1211 aa11.67□□□□□ -0.54
PAB1YER165W YGL015CP33199 130 aa11.66□□□□□ -0.54
PAB1YER165W YJL007CP47080 104 aa11.66□□□□□ -0.54
PAB1YER165W GRE2Q12068 342 aaKnown RBP11.65□□□□□ -0.54
PAB1YER165W ATG32P40458 529 aa11.63□□□□□ -0.55
PAB1YER165W YGR273CP53329 174 aa11.63□□□□□ -0.55
PAB1YER165W RAD54P32863 898 aa11.62□□□□□ -0.55
PAB1YER165W PIB1Q06651 286 aa11.61□□□□□ -0.55
PAB1YER165W PCS60P38137 543 aaKnown RBP RIP-Chip data11.6□□□□□ -0.55not detected
PAB1YER165W SCC2Q04002 1493 aa11.6□□□□□ -0.55
PAB1YER165W YAP5P40574 245 aa11.59□□□□□ -0.55
PAB1YER165W KEX1P09620 729 aa11.58□□□□□ -0.56
PAB1YER165W SSA4P22202 642 aaKnown RBP11.58□□□□□ -0.56
PAB1YER165W KTR1P27810 393 aaKnown RBP11.58□□□□□ -0.56
PAB1YER165W YPK9Q12697 1472 aa11.58□□□□□ -0.56
PAB1YER165W TEA1P47988 759 aa11.57□□□□□ -0.56
PAB1YER165W MYO2P19524 1574 aaKnown RBP11.57□□□□□ -0.56
PAB1YER165W ORC6P38826 435 aa11.56□□□□□ -0.56
PAB1YER165W TIF1P10081 395 aaKnown RBP11.53□□□□□ -0.56
PAB1YER165W RPL34BP40525 121 aaKnown RBP11.53□□□□□ -0.56
PAB1YER165W SAM3Q08986 587 aa11.53□□□□□ -0.56
PAB1YER165W CDC25P04821 1589 aa11.53□□□□□ -0.56
PAB1YER165W SOL3P38858 249 aa11.52□□□□□ -0.56
PAB1YER165W RPO31P04051 1460 aa11.51□□□□□ -0.57
PAB1YER165W CHD1P32657 1468 aa11.51□□□□□ -0.57
PAB1YER165W ESC1Q03661 1658 aaKnown RBP11.5□□□□□ -0.57
PAB1YER165W TYW1Q08960 810 aaKnown RBP11.49□□□□□ -0.57
PAB1YER165W ERG12P07277 443 aa11.49□□□□□ -0.57
PAB1YER165W YBL036CP38197 257 aa11.49□□□□□ -0.57
PAB1YER165W TIF4632P39936 914 aaKnown RBP11.49□□□□□ -0.57
PAB1YER165W DNF1P32660 1571 aa11.48□□□□□ -0.57
PAB1YER165W RGR1P19263 1082 aa11.46□□□□□ -0.57
PAB1YER165W CLB5P30283 435 aa11.46□□□□□ -0.58
PAB1YER165W BIO2P32451 375 aa11.46□□□□□ -0.58
PAB1YER165W MET5P47169 1442 aa11.45□□□□□ -0.58
PAB1YER165W TY2B-LR1P0C2J3 1770 aa11.45□□□□□ -0.58
PAB1YER165W TY2B-FP0CX63 1770 aa11.45□□□□□ -0.58
PAB1YER165W TY2B-GR2P0CX64 1770 aa11.45□□□□□ -0.58
PAB1YER165W TY2B-CP25384 1770 aa11.45□□□□□ -0.58
PAB1YER165W TY2B-DR2Q03494 1770 aa11.45□□□□□ -0.58
PAB1YER165W TY1B-DR1Q03855 1755 aa11.45□□□□□ -0.58
PAB1YER165W TY2B-DR3Q07791 1770 aaKnown RBP11.45□□□□□ -0.58
PAB1YER165W TY2B-OR1Q12113 1770 aa11.45□□□□□ -0.58
PAB1YER165W TY2B-DR1Q12472 1770 aa11.45□□□□□ -0.58
PAB1YER165W TY2B-OR2Q12501 1770 aa11.45□□□□□ -0.58
PAB1YER165W GYP5Q12344 894 aa11.44□□□□□ -0.58
PAB1YER165W CPS1P27614 576 aa11.43□□□□□ -0.58
PAB1YER165W TTI1P36097 1038 aa11.43□□□□□ -0.58
PAB1YER165W AIM44Q99299 758 aa11.43□□□□□ -0.58
PAB1YER165W NST1P53935 1240 aa11.42□□□□□ -0.58
PAB1YER165W TY1B-BRQ12193 1756 aa11.41□□□□□ -0.58
PAB1YER165W TY1B-GR3Q12316 1755 aa11.41□□□□□ -0.58
PAB1YER165W TY1B-ORQ92393 1755 aa11.41□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms