RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C RPO21P04050 1733 aaKnown RBP11.89□□□□□ -0.51
PUP3YER094C PDR15Q04182 1529 aaKnown RBP11.89□□□□□ -0.51
PUP3YER094C ULS1Q08562 1619 aa11.88□□□□□ -0.51
PUP3YER094C TAF7Q05021 590 aa11.87□□□□□ -0.51
PUP3YER094C MET5P47169 1442 aa11.86□□□□□ -0.51
PUP3YER094C NUP159P40477 1460 aa11.84□□□□□ -0.51
PUP3YER094C SNT2P53127 1403 aa11.82□□□□□ -0.52
PUP3YER094C YRF1-1P0CX20 1796 aa11.76□□□□□ -0.53
PUP3YER094C YRF1-5P0CX21 1796 aa11.76□□□□□ -0.53
PUP3YER094C YRF1-8P0CX22 1796 aa11.76□□□□□ -0.53
PUP3YER094C GEA2P39993 1459 aaKnown RBP11.76□□□□□ -0.53
PUP3YER094C IFH1P39520 1085 aa11.75□□□□□ -0.53
PUP3YER094C RTT106P40161 455 aa11.74□□□□□ -0.53
PUP3YER094C GEA1P47102 1408 aaPredicted RBP11.73□□□□□ -0.53
PUP3YER094C VPS15P22219 1454 aa11.7□□□□□ -0.54
PUP3YER094C IRC20Q06554 1556 aa11.68□□□□□ -0.54
PUP3YER094C SPO14P36126 1683 aa11.65□□□□□ -0.54
PUP3YER094C LTE1P07866 1435 aa11.64□□□□□ -0.55
PUP3YER094C PDR12Q02785 1511 aa11.63□□□□□ -0.55
PUP3YER094C TY3B-GQ99315 1547 aa11.63□□□□□ -0.55
PUP3YER094C YBT1P32386 1661 aa11.62□□□□□ -0.55
PUP3YER094C MET10P39692 1035 aa11.61□□□□□ -0.55
PUP3YER094C GDB1Q06625 1536 aa11.6□□□□□ -0.55
PUP3YER094C CAT8P39113 1433 aa11.58□□□□□ -0.56
PUP3YER094C NUP157P40064 1391 aaKnown RBP11.55□□□□□ -0.56
PUP3YER094C PDR10P51533 1564 aa11.55□□□□□ -0.56
PUP3YER094C IKI3Q06706 1349 aaKnown RBP11.53□□□□□ -0.56
PUP3YER094C NUP170P38181 1502 aa11.52□□□□□ -0.57
PUP3YER094C ARO1P08566 1588 aaKnown RBP11.5□□□□□ -0.57
PUP3YER094C DRS2P39524 1355 aa11.48□□□□□ -0.57
PUP3YER094C IQG1Q12280 1495 aa11.48□□□□□ -0.57
PUP3YER094C BUD3P25558 1636 aa11.45□□□□□ -0.58
PUP3YER094C BNI1P41832 1953 aa11.42□□□□□ -0.58
PUP3YER094C CKB1P43639 278 aa11.42□□□□□ -0.58
PUP3YER094C DOP1Q03921 1698 aa11.4□□□□□ -0.58
PUP3YER094C SSM4P40318 1319 aa11.39□□□□□ -0.59
PUP3YER094C SRB8P25648 1427 aa11.39□□□□□ -0.59
PUP3YER094C TRM3Q07527 1436 aa11.37□□□□□ -0.59
PUP3YER094C ITT1Q04638 464 aa11.36□□□□□ -0.59
PUP3YER094C CHC1P22137 1653 aaKnown RBP11.33□□□□□ -0.6
PUP3YER094C YSP2Q06681 1438 aa11.33□□□□□ -0.6
PUP3YER094C SEC7P11075 2009 aaKnown RBP11.32□□□□□ -0.6
PUP3YER094C MMS1Q06211 1407 aa11.3□□□□□ -0.6
PUP3YER094C BNR1P40450 1375 aa11.27□□□□□ -0.61
PUP3YER094C BUD21Q08492 214 aaPredicted RBP11.24□□□□□ -0.61
PUP3YER094C DNF2Q12675 1612 aa11.21□□□□□ -0.61
PUP3YER094C GCN2P15442 1659 aa11.19□□□□□ -0.62
PUP3YER094C YOR093CQ12275 1648 aa11.12□□□□□ -0.63
PUP3YER094C NUP188P52593 1655 aaKnown RBP11.08□□□□□ -0.64
PUP3YER094C VMR1P38735 1592 aa11.06□□□□□ -0.64
PUP3YER094C PDR5P33302 1511 aaKnown RBP11.05□□□□□ -0.64
PUP3YER094C ABP1P15891 592 aaKnown RBP11.02□□□□□ -0.65
PUP3YER094C IML1P47170 1584 aa11.02□□□□□ -0.65
PUP3YER094C PAF1P38351 445 aa10.98□□□□□ -0.65
PUP3YER094C URN1Q06525 465 aaKnown RBP10.98□□□□□ -0.65
PUP3YER094C NOP7P53261 605 aaKnown RBP10.97□□□□□ -0.65
PUP3YER094C DNF3Q12674 1656 aa10.97□□□□□ -0.65
PUP3YER094C YAP3P38749 330 aa10.95□□□□□ -0.66
PUP3YER094C PDR11P40550 1411 aa10.91□□□□□ -0.66
PUP3YER094C IPL1P38991 367 aa10.9□□□□□ -0.66
PUP3YER094C BFR2Q06631 534 aaKnown RBP10.9□□□□□ -0.66
PUP3YER094C RAV1P47104 1357 aa10.89□□□□□ -0.67
PUP3YER094C TYS1P36421 394 aaKnown RBP10.87□□□□□ -0.67
PUP3YER094C HAP1P0CE41 1502 aa10.84□□□□□ -0.67
PUP3YER094C RTC1Q08281 1341 aa10.83□□□□□ -0.68
PUP3YER094C NUP192P47054 1683 aa10.78□□□□□ -0.68
PUP3YER094C MIF2P35201 549 aa10.77□□□□□ -0.69
PUP3YER094C MAK10Q02197 733 aa10.75□□□□□ -0.69
PUP3YER094C USO1P25386 1790 aa10.72□□□□□ -0.69
PUP3YER094C TAF5P38129 798 aa10.71□□□□□ -0.69
PUP3YER094C POL5P39985 1022 aaKnown RBP10.71□□□□□ -0.69
PUP3YER094C BCK1Q01389 1478 aa10.7□□□□□ -0.7
PUP3YER094C ESL2P36168 1195 aa10.69□□□□□ -0.7
PUP3YER094C TY3B-IQ7LHG5 1498 aaKnown RBP10.67□□□□□ -0.7
PUP3YER094C TY1B-NL2Q99337 1749 aaKnown RBP10.67□□□□□ -0.7
PUP3YER094C RAD9P14737 1309 aa10.66□□□□□ -0.7
PUP3YER094C MRX12P47084 519 aa10.66□□□□□ -0.7
PUP3YER094C KRE5P22023 1365 aa10.65□□□□□ -0.7
PUP3YER094C ALD4P46367 519 aaKnown RBP10.64□□□□□ -0.71
PUP3YER094C ORC1P54784 914 aaPredicted RBP10.64□□□□□ -0.71
PUP3YER094C CAB1Q04430 367 aa10.64□□□□□ -0.71
PUP3YER094C KIP3P53086 805 aaKnown RBP10.61□□□□□ -0.71
PUP3YER094C RIA1P53893 1110 aa10.61□□□□□ -0.71
PUP3YER094C YLR419WQ06698 1435 aaKnown RBP10.6□□□□□ -0.71
PUP3YER094C NAP1P25293 417 aaKnown RBP10.6□□□□□ -0.71
PUP3YER094C TAF8Q03750 510 aa10.59□□□□□ -0.71
PUP3YER094C CFT1Q06632 1357 aaKnown RBP10.59□□□□□ -0.71
PUP3YER094C SPE2P21182 396 aa10.56□□□□□ -0.72
PUP3YER094C MHP1P43638 1398 aa10.53□□□□□ -0.72
PUP3YER094C SCT1P32784 759 aa10.52□□□□□ -0.73
PUP3YER094C YMR196WQ04336 1088 aa10.52□□□□□ -0.73
PUP3YER094C YNR029CP53729 429 aaKnown RBP10.5□□□□□ -0.73
PUP3YER094C MLP1Q02455 1875 aaKnown RBP10.47□□□□□ -0.73
PUP3YER094C THI12P42883 340 aa10.47□□□□□ -0.73
PUP3YER094C THI5P43534 340 aa10.47□□□□□ -0.73
PUP3YER094C YFR006WP43590 535 aa10.47□□□□□ -0.73
PUP3YER094C THI11P47183 340 aa10.47□□□□□ -0.73
PUP3YER094C THI13Q07748 340 aa10.47□□□□□ -0.73
PUP3YER094C RCM1P53972 490 aa10.46□□□□□ -0.73
PUP3YER094C CHZ1P40019 153 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms