RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W PTC4P38089 393 aa10.54□□□□□ -0.72
RPN9YDR427W YEL023CP39992 682 aa10.52□□□□□ -0.73
RPN9YDR427W CHL1P22516 861 aaPredicted RBP10.51□□□□□ -0.73
RPN9YDR427W BCK2P33306 851 aa10.49□□□□□ -0.73
RPN9YDR427W PRE3P38624 215 aa10.46□□□□□ -0.73
RPN9YDR427W GRE2Q12068 342 aaKnown RBP10.42□□□□□ -0.74
RPN9YDR427W MAK11P20484 414 aaKnown RBP10.35□□□□□ -0.75
RPN9YDR427W MIF2P35201 549 aa10.35□□□□□ -0.75
RPN9YDR427W ATH1P48016 1211 aa10.34□□□□□ -0.75
RPN9YDR427W GUT1P32190 709 aa10.31□□□□□ -0.76
RPN9YDR427W PML39Q03760 334 aa10.31□□□□□ -0.76
RPN9YDR427W PTC3P34221 468 aaKnown RBP10.28□□□□□ -0.76
RPN9YDR427W ELP4Q02884 456 aaKnown RBP10.27□□□□□ -0.77
RPN9YDR427W RAM2P29703 316 aa10.25□□□□□ -0.77
RPN9YDR427W VRP1P37370 817 aa10.24□□□□□ -0.77
RPN9YDR427W XDJ1P39102 459 aa10.24□□□□□ -0.77
RPN9YDR427W EDS1P38073 919 aa10.23□□□□□ -0.77
RPN9YDR427W COQ8P27697 501 aa10.18□□□□□ -0.78
RPN9YDR427W ARH1P48360 493 aa10.17□□□□□ -0.78
RPN9YDR427W YDR344CQ05510 147 aa10.17□□□□□ -0.78
RPN9YDR427W PEX29Q03370 554 aa10.14□□□□□ -0.79
RPN9YDR427W MID1P41821 548 aa10.13□□□□□ -0.79
RPN9YDR427W NST1P53935 1240 aa10.13□□□□□ -0.79
RPN9YDR427W AI4P03878 556 aa10.11□□□□□ -0.79
RPN9YDR427W MPH3P0CE00 602 aa10.1□□□□□ -0.79
RPN9YDR427W SPT23P35210 1082 aa10.08□□□□□ -0.8
RPN9YDR427W SOL3P38858 249 aa10.08□□□□□ -0.8
RPN9YDR427W NOP53Q12080 455 aaKnown RBP10.06□□□□□ -0.8
RPN9YDR427W DPS1P04802 557 aaKnown RBP10.04□□□□□ -0.8
RPN9YDR427W HAP5Q02516 242 aa10.03□□□□□ -0.8
RPN9YDR427W YGR273CP53329 174 aa9.97□□□□□ -0.81
RPN9YDR427W BNI4P53858 892 aa9.97□□□□□ -0.81
RPN9YDR427W ILV3P39522 585 aaKnown RBP9.96□□□□□ -0.82
RPN9YDR427W PTC2P39966 464 aaKnown RBP9.94□□□□□ -0.82
RPN9YDR427W YML082WQ04533 649 aaKnown RBP9.92□□□□□ -0.82
RPN9YDR427W MPC54Q08550 464 aa9.92□□□□□ -0.82
RPN9YDR427W NMA111P53920 997 aa9.85□□□□□ -0.83
RPN9YDR427W SLI15P38283 698 aa9.84□□□□□ -0.83
RPN9YDR427W DPL1Q05567 589 aa9.83□□□□□ -0.84
RPN9YDR427W KEX1P09620 729 aa9.74□□□□□ -0.85
RPN9YDR427W ISU2Q12056 156 aa9.73□□□□□ -0.85
RPN9YDR427W SRC1Q03707 834 aa9.72□□□□□ -0.85
RPN9YDR427W SET1P38827 1080 aaKnown RBP9.66□□□□□ -0.86
RPN9YDR427W YPR015CQ12531 247 aa9.65□□□□□ -0.86
RPN9YDR427W GYP1Q08484 637 aa9.64□□□□□ -0.87
RPN9YDR427W RAM1P22007 431 aa9.63□□□□□ -0.87
RPN9YDR427W CDC73Q06697 393 aa9.63□□□□□ -0.87
RPN9YDR427W RPP1BP10622 106 aaKnown RBP9.62□□□□□ -0.87
RPN9YDR427W YLR326WQ06170 240 aaKnown RBP9.61□□□□□ -0.87
RPN9YDR427W RAS1P01119 309 aa9.59□□□□□ -0.87
RPN9YDR427W UBP14P38237 781 aaKnown RBP9.59□□□□□ -0.87
RPN9YDR427W VHR2P40041 505 aa9.59□□□□□ -0.87
RPN9YDR427W RAD54P32863 898 aa9.57□□□□□ -0.88
RPN9YDR427W SAS4Q04003 481 aa9.57□□□□□ -0.88
RPN9YDR427W AMS1P22855 1083 aa9.55□□□□□ -0.88
RPN9YDR427W PCS60P38137 543 aaKnown RBP RIP-Chip data9.54□□□□□ -0.88not detected
RPN9YDR427W PDR1P12383 1068 aa9.52□□□□□ -0.89
RPN9YDR427W TRK1P12685 1235 aa9.48□□□□□ -0.89
RPN9YDR427W IFH1P39520 1085 aa9.47□□□□□ -0.89
RPN9YDR427W YEL077CQ3E7X8 1277 aa9.47□□□□□ -0.89
RPN9YDR427W KIC1P38692 1080 aa9.46□□□□□ -0.9
RPN9YDR427W MRF1P30775 413 aaPredicted RBP9.45□□□□□ -0.9
RPN9YDR427W RGA1P39083 1007 aa9.43□□□□□ -0.9
RPN9YDR427W PEX21P50091 288 aa9.43□□□□□ -0.9
RPN9YDR427W RGA2Q06407 1009 aa9.41□□□□□ -0.9
RPN9YDR427W SDH2P21801 266 aa9.4□□□□□ -0.9
RPN9YDR427W YDR090CQ03193 310 aa9.38□□□□□ -0.91
RPN9YDR427W YRR1Q12172 810 aa9.38□□□□□ -0.91
RPN9YDR427W PRT1P06103 763 aaKnown RBP9.36□□□□□ -0.91
RPN9YDR427W CSC1Q06538 782 aa9.35□□□□□ -0.91
RPN9YDR427W TFB4Q12004 338 aa9.35□□□□□ -0.91
RPN9YDR427W BUD20Q08004 166 aaPredicted RBP9.34□□□□□ -0.91
RPN9YDR427W ERG12P07277 443 aa9.31□□□□□ -0.92
RPN9YDR427W GAP1P19145 602 aaPredicted RBP9.31□□□□□ -0.92
RPN9YDR427W REF2P42073 533 aaPredicted RBP9.31□□□□□ -0.92
RPN9YDR427W NPL4P33755 580 aa9.29□□□□□ -0.92
RPN9YDR427W STR2P47164 639 aa9.29□□□□□ -0.92
RPN9YDR427W TUM1Q08686 304 aaKnown RBP9.29□□□□□ -0.92
RPN9YDR427W NUD1P32336 851 aa9.28□□□□□ -0.92
RPN9YDR427W ISM1P48526 1002 aa9.27□□□□□ -0.93
RPN9YDR427W YPR148CQ06523 435 aa9.27□□□□□ -0.93
RPN9YDR427W ORC6P38826 435 aa9.21□□□□□ -0.94
RPN9YDR427W MAK21Q12176 1025 aaKnown RBP9.21□□□□□ -0.94
RPN9YDR427W SPT16P32558 1035 aaKnown RBP9.2□□□□□ -0.94
RPN9YDR427W GCD11P32481 527 aaKnown RBP9.19□□□□□ -0.94
RPN9YDR427W GCR2Q01722 534 aa9.18□□□□□ -0.94
RPN9YDR427W BRE2P43132 505 aa9.17□□□□□ -0.94
RPN9YDR427W COX6P00427 148 aa9.16□□□□□ -0.94
RPN9YDR427W CST6P40535 587 aa9.15□□□□□ -0.94
RPN9YDR427W MVP1P40959 511 aaKnown RBP9.14□□□□□ -0.95
RPN9YDR427W VPS70P47161 811 aa9.14□□□□□ -0.95
RPN9YDR427W TY1A-DR4O74302 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-HP0C2I4 478 aaKnown RBP9.12□□□□□ -0.95
RPN9YDR427W TY1A-AP0CX57 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-PR1P0CX58 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-ORP0CX59 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-PR2P0CX60 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-DR5P0CX65 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-ER2P0CX66 440 aa9.12□□□□□ -0.95
RPN9YDR427W TY1A-GR3P0CX67 440 aa9.12□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 549.3 ms