RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A VPS29P38759 282 aa5.85□□□□□ -1.47
TFB5YDR079C-A YEL023CP39992 682 aa5.85□□□□□ -1.47
TFB5YDR079C-A ELP4Q02884 456 aaKnown RBP5.85□□□□□ -1.47
TFB5YDR079C-A YLR271WQ06152 274 aa5.82□□□□□ -1.48
TFB5YDR079C-A GYP5Q12344 894 aa5.82□□□□□ -1.48
TFB5YDR079C-A DCW1P36091 449 aa5.78□□□□□ -1.48
TFB5YDR079C-A ARH1P48360 493 aa5.75□□□□□ -1.49
TFB5YDR079C-A PML39Q03760 334 aa5.75□□□□□ -1.49
TFB5YDR079C-A RTG3P38165 486 aa5.7□□□□□ -1.5
TFB5YDR079C-A SPT23P35210 1082 aa5.68□□□□□ -1.5
TFB5YDR079C-A YPL062WQ02781 134 aa5.68□□□□□ -1.5
TFB5YDR079C-A RAS1P01119 309 aa5.62□□□□□ -1.51
TFB5YDR079C-A TRK1P12685 1235 aa5.59□□□□□ -1.51
TFB5YDR079C-A MID1P41821 548 aa5.59□□□□□ -1.51
TFB5YDR079C-A YML082WQ04533 649 aaKnown RBP5.59□□□□□ -1.51
TFB5YDR079C-A BNI4P53858 892 aa5.57□□□□□ -1.52
TFB5YDR079C-A HAP5Q02516 242 aa5.56□□□□□ -1.52
TFB5YDR079C-A RCR1P38212 213 aa5.55□□□□□ -1.52
TFB5YDR079C-A PEX29Q03370 554 aa5.54□□□□□ -1.52
TFB5YDR079C-A GRE2Q12068 342 aaKnown RBP5.54□□□□□ -1.52
TFB5YDR079C-A PTC2P39966 464 aaKnown RBP5.53□□□□□ -1.52
TFB5YDR079C-A CST9Q06032 482 aa5.53□□□□□ -1.52
TFB5YDR079C-A NST1P53935 1240 aa5.49□□□□□ -1.53
TFB5YDR079C-A AMS1P22855 1083 aa5.46□□□□□ -1.54
TFB5YDR079C-A ARP8Q12386 881 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
TFB5YDR079C-A GUT1P32190 709 aa5.42□□□□□ -1.54
TFB5YDR079C-A ATH1P48016 1211 aa5.41□□□□□ -1.54
TFB5YDR079C-A AI4P03878 556 aa5.4□□□□□ -1.54
TFB5YDR079C-A MGA2P40578 1113 aa5.4□□□□□ -1.54
TFB5YDR079C-A MPH3P0CE00 602 aa5.39□□□□□ -1.55
TFB5YDR079C-A MPC54Q08550 464 aa5.38□□□□□ -1.55
TFB5YDR079C-A YPR015CQ12531 247 aa5.38□□□□□ -1.55
TFB5YDR079C-A SOL3P38858 249 aa5.37□□□□□ -1.55
TFB5YDR079C-A ILV3P39522 585 aaKnown RBP5.36□□□□□ -1.55
TFB5YDR079C-A SSP1P38871 571 aa5.34□□□□□ -1.55
TFB5YDR079C-A PTC3P34221 468 aaKnown RBP5.33□□□□□ -1.56
TFB5YDR079C-A NMA111P53920 997 aa5.33□□□□□ -1.56
TFB5YDR079C-A SDH2P21801 266 aa5.31□□□□□ -1.56
TFB5YDR079C-A RAM1P22007 431 aa5.31□□□□□ -1.56
TFB5YDR079C-A GBP2P25555 427 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
TFB5YDR079C-A GAR1P28007 205 aaKnown RBP5.31□□□□□ -1.56
TFB5YDR079C-A GYP1Q08484 637 aa5.3□□□□□ -1.56
TFB5YDR079C-A EDS1P38073 919 aa5.29□□□□□ -1.56
TFB5YDR079C-A BRE2P43132 505 aa5.29□□□□□ -1.56
TFB5YDR079C-A MIF2P35201 549 aa5.28□□□□□ -1.56
TFB5YDR079C-A YEL077CQ3E7X8 1277 aa5.25□□□□□ -1.57
TFB5YDR079C-A DPL1Q05567 589 aa5.24□□□□□ -1.57
TFB5YDR079C-A SAS4Q04003 481 aa5.23□□□□□ -1.57
TFB5YDR079C-A GCR2Q01722 534 aa5.21□□□□□ -1.58
TFB5YDR079C-A MAK11P20484 414 aaKnown RBP5.19□□□□□ -1.58
TFB5YDR079C-A SLI15P38283 698 aa5.19□□□□□ -1.58
TFB5YDR079C-A YGR273CP53329 174 aa5.16□□□□□ -1.58
TFB5YDR079C-A ISU2Q12056 156 aa5.16□□□□□ -1.58
TFB5YDR079C-A AIR1P40507 360 aaKnown RBP5.14□□□□□ -1.59
TFB5YDR079C-A MRF1P30775 413 aaPredicted RBP5.12□□□□□ -1.59
TFB5YDR079C-A MET22P32179 357 aa5.11□□□□□ -1.59
TFB5YDR079C-A PDR1P12383 1068 aa5.1□□□□□ -1.59
TFB5YDR079C-A COQ8P27697 501 aa5.1□□□□□ -1.59
TFB5YDR079C-A ENV9Q08651 330 aa5.1□□□□□ -1.59
TFB5YDR079C-A CLA4P48562 842 aa5.07□□□□□ -1.6
TFB5YDR079C-A MTC5Q03897 1148 aa5.07□□□□□ -1.6
TFB5YDR079C-A TFA1P36100 482 aa5.06□□□□□ -1.6
TFB5YDR079C-A RAM2P29703 316 aa5.04□□□□□ -1.6
TFB5YDR079C-A YDL176WQ12027 708 aa5.04□□□□□ -1.6
TFB5YDR079C-A CST6P40535 587 aa5.02□□□□□ -1.61
TFB5YDR079C-A YDR444WQ04093 687 aa5.02□□□□□ -1.61
TFB5YDR079C-A CDC73Q06697 393 aa5.02□□□□□ -1.61
TFB5YDR079C-A ERG12P07277 443 aa5□□□□□ -1.61
TFB5YDR079C-A CDC4P07834 779 aa4.99□□□□□ -1.61
TFB5YDR079C-A PRT1P06103 763 aaKnown RBP4.97□□□□□ -1.61
TFB5YDR079C-A LAM6Q08001 693 aa4.97□□□□□ -1.61
TFB5YDR079C-A BUD20Q08004 166 aaPredicted RBP4.97□□□□□ -1.61
TFB5YDR079C-A NOP53Q12080 455 aaKnown RBP4.97□□□□□ -1.61
TFB5YDR079C-A LCB5Q06147 687 aaKnown RBP4.96□□□□□ -1.62
TFB5YDR079C-A KEX1P09620 729 aa4.95□□□□□ -1.62
TFB5YDR079C-A STR2P47164 639 aa4.88□□□□□ -1.63
TFB5YDR079C-A FRK1Q03002 865 aaPredicted RBP4.87□□□□□ -1.63
TFB5YDR079C-A ISM1P48526 1002 aa4.84□□□□□ -1.63
TFB5YDR079C-A HED1Q03937 162 aa4.84□□□□□ -1.63
TFB5YDR079C-A BDP1P46678 594 aa4.82□□□□□ -1.64
TFB5YDR079C-A RPP1BP10622 106 aaKnown RBP4.81□□□□□ -1.64
TFB5YDR079C-A RRD1P40454 393 aaKnown RBP4.81□□□□□ -1.64
TFB5YDR079C-A SPT16P32558 1035 aaKnown RBP4.8□□□□□ -1.64
TFB5YDR079C-A YLR326WQ06170 240 aaKnown RBP4.8□□□□□ -1.64
TFB5YDR079C-A YRR1Q12172 810 aa4.8□□□□□ -1.64
TFB5YDR079C-A TRK2P28584 889 aa4.78□□□□□ -1.64
TFB5YDR079C-A NUD1P32336 851 aa4.78□□□□□ -1.64
TFB5YDR079C-A ASH1P34233 588 aa4.78□□□□□ -1.64
TFB5YDR079C-A TY1A-DR4O74302 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-HP0C2I4 478 aaKnown RBP4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-AP0CX57 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-PR1P0CX58 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-ORP0CX59 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-PR2P0CX60 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-DR5P0CX65 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-ER2P0CX66 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-GR3P0CX67 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-LR1P0CX68 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A TY1A-MR2P0CX69 440 aa4.77□□□□□ -1.65
TFB5YDR079C-A AFT1P22149 690 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms