RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF11, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF11YDR073W YML020WQ03722 664 aa8.73□□□□□ -1.01
SNF11YDR073W MIF2P35201 549 aa8.71□□□□□ -1.02
SNF11YDR073W TFB3Q03290 321 aa8.69□□□□□ -1.02
SNF11YDR073W BRL1P38770 471 aa8.68□□□□□ -1.02
SNF11YDR073W YMR1P47147 688 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
SNF11YDR073W COX6P00427 148 aa8.67□□□□□ -1.02
SNF11YDR073W SSA1P10591 642 aaKnown RBP8.67□□□□□ -1.02
SNF11YDR073W SPP1Q03012 353 aa8.67□□□□□ -1.02
SNF11YDR073W GEF1P37020 779 aa8.66□□□□□ -1.02
SNF11YDR073W SLX8P40072 274 aa8.65□□□□□ -1.02
SNF11YDR073W TIF11P38912 153 aaKnown RBP8.64□□□□□ -1.03
SNF11YDR073W EDS1P38073 919 aa8.62□□□□□ -1.03
SNF11YDR073W NOP8Q08287 484 aaPredicted RBP8.62□□□□□ -1.03
SNF11YDR073W STS1P38637 319 aa8.61□□□□□ -1.03
SNF11YDR073W WSC3Q12215 556 aa8.61□□□□□ -1.03
SNF11YDR073W SSA2P10592 639 aaKnown RBP8.6□□□□□ -1.03
SNF11YDR073W SUB2Q07478 446 aaKnown RBP8.6□□□□□ -1.03
SNF11YDR073W AIR2Q12476 344 aaKnown RBP8.59□□□□□ -1.03
SNF11YDR073W GTT3P39996 337 aa8.58□□□□□ -1.04
SNF11YDR073W FKH1P40466 484 aa8.58□□□□□ -1.04
SNF11YDR073W DBP1P24784 617 aaKnown RBP8.57□□□□□ -1.04
SNF11YDR073W PKC1P24583 1151 aa8.56□□□□□ -1.04
SNF11YDR073W BIM1P40013 344 aa8.54□□□□□ -1.04
SNF11YDR073W YJL007CP47080 104 aa8.54□□□□□ -1.04
SNF11YDR073W IOC2Q12072 812 aa8.54□□□□□ -1.04
SNF11YDR073W PTC3P34221 468 aaKnown RBP8.53□□□□□ -1.04
SNF11YDR073W YFR006WP43590 535 aa8.53□□□□□ -1.04
SNF11YDR073W SSA4P22202 642 aaKnown RBP8.52□□□□□ -1.05
SNF11YDR073W CSN12P47130 423 aa8.52□□□□□ -1.05
SNF11YDR073W MSB4Q12317 492 aa8.52□□□□□ -1.05
SNF11YDR073W UBP14P38237 781 aaKnown RBP8.51□□□□□ -1.05
SNF11YDR073W VHR2P40041 505 aa8.51□□□□□ -1.05
SNF11YDR073W RPL34BP40525 121 aaKnown RBP8.51□□□□□ -1.05
SNF11YDR073W KIC1P38692 1080 aa8.49□□□□□ -1.05
SNF11YDR073W ULI1P43604 169 aa8.49□□□□□ -1.05
SNF11YDR073W ATG32P40458 529 aa8.48□□□□□ -1.05
SNF11YDR073W GLN1P32288 370 aaKnown RBP8.46□□□□□ -1.06
SNF11YDR073W NOP7P53261 605 aaKnown RBP8.46□□□□□ -1.06
SNF11YDR073W YDR090CQ03193 310 aa8.46□□□□□ -1.06
SNF11YDR073W PSE1P32337 1089 aaKnown RBP8.45□□□□□ -1.06
SNF11YDR073W SLD2P34252 453 aa8.45□□□□□ -1.06
SNF11YDR073W EAP1P36041 632 aaKnown RBP8.45□□□□□ -1.06
SNF11YDR073W PIB1Q06651 286 aa8.45□□□□□ -1.06
SNF11YDR073W LDB19Q12502 818 aa8.45□□□□□ -1.06
SNF11YDR073W YJL171CP46992 396 aa8.44□□□□□ -1.06
SNF11YDR073W ORC1P54784 914 aaPredicted RBP8.43□□□□□ -1.06
SNF11YDR073W RPL34AP87262 121 aaPredicted RBP8.43□□□□□ -1.06
SNF11YDR073W VMA1P17255 1071 aaKnown RBP8.41□□□□□ -1.06
SNF11YDR073W YLR326WQ06170 240 aaKnown RBP8.41□□□□□ -1.06
SNF11YDR073W SAM3Q08986 587 aa8.41□□□□□ -1.06
SNF11YDR073W TIF1P10081 395 aaKnown RBP8.4□□□□□ -1.06
SNF11YDR073W YBL036CP38197 257 aa8.4□□□□□ -1.06
SNF11YDR073W CPS1P27614 576 aa8.39□□□□□ -1.07
SNF11YDR073W YOL036WQ08206 761 aa8.39□□□□□ -1.07
SNF11YDR073W ERG12P07277 443 aa8.38□□□□□ -1.07
SNF11YDR073W NAP1P25293 417 aaKnown RBP8.38□□□□□ -1.07
SNF11YDR073W RAD54P32863 898 aa8.38□□□□□ -1.07
SNF11YDR073W TEA1P47988 759 aa8.38□□□□□ -1.07
SNF11YDR073W ATH1P48016 1211 aa8.38□□□□□ -1.07
SNF11YDR073W GUT1P32190 709 aa8.37□□□□□ -1.07
SNF11YDR073W YPR204WQ08995 1032 aa8.37□□□□□ -1.07
SNF11YDR073W MRX12P47084 519 aa8.36□□□□□ -1.07
SNF11YDR073W CDC3P32457 520 aaKnown RBP8.35□□□□□ -1.07
SNF11YDR073W SNU71P53207 620 aaKnown RBP8.35□□□□□ -1.07
SNF11YDR073W GRE2Q12068 342 aaKnown RBP8.35□□□□□ -1.07
SNF11YDR073W BMT6Q12291 365 aa8.35□□□□□ -1.07
SNF11YDR073W KTR1P27810 393 aaKnown RBP8.34□□□□□ -1.07
SNF11YDR073W TYW1Q08960 810 aaKnown RBP8.34□□□□□ -1.07
SNF11YDR073W TRP5P00931 707 aaKnown RBP8.33□□□□□ -1.08
SNF11YDR073W RTG2P32608 588 aaKnown RBP8.33□□□□□ -1.08
SNF11YDR073W TTI1P36097 1038 aa8.33□□□□□ -1.08
SNF11YDR073W SET4P42948 560 aa8.32□□□□□ -1.08
SNF11YDR073W BIO2P32451 375 aa8.31□□□□□ -1.08
SNF11YDR073W SEC61P32915 480 aa8.31□□□□□ -1.08
SNF11YDR073W PCS60P38137 543 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
SNF11YDR073W YGR273CP53329 174 aa8.31□□□□□ -1.08
SNF11YDR073W RTG1P32607 177 aa8.3□□□□□ -1.08
SNF11YDR073W YNL035CP53962 389 aaKnown RBP8.3□□□□□ -1.08
SNF11YDR073W KEX1P09620 729 aa8.29□□□□□ -1.08
SNF11YDR073W NOB1Q08444 459 aaKnown RBP8.29□□□□□ -1.08
SNF11YDR073W NCR1Q12200 1170 aa8.29□□□□□ -1.08
SNF11YDR073W GYP5Q12344 894 aa8.29□□□□□ -1.08
SNF11YDR073W ORC6P38826 435 aa8.28□□□□□ -1.08
SNF11YDR073W YNL108CP53929 270 aa8.28□□□□□ -1.08
SNF11YDR073W CLB5P30283 435 aa8.27□□□□□ -1.09
SNF11YDR073W SSF1P38789 453 aaPredicted RBP8.27□□□□□ -1.09
SNF11YDR073W CSE4P36012 229 aa8.26□□□□□ -1.09
SNF11YDR073W MET10P39692 1035 aa8.26□□□□□ -1.09
SNF11YDR073W YMR196WQ04336 1088 aa8.26□□□□□ -1.09
SNF11YDR073W PKH3Q03306 898 aaPredicted RBP8.25□□□□□ -1.09
SNF11YDR073W HEM3P28789 327 aa8.24□□□□□ -1.09
SNF11YDR073W SOL3P38858 249 aa8.24□□□□□ -1.09
SNF11YDR073W IOC4Q04213 475 aa8.24□□□□□ -1.09
SNF11YDR073W RAD59Q12223 238 aa8.24□□□□□ -1.09
SNF11YDR073W HTA1P04911 132 aaKnown RBP8.22□□□□□ -1.09
SNF11YDR073W HTA2P04912 132 aa8.22□□□□□ -1.09
SNF11YDR073W RGR1P19263 1082 aa8.22□□□□□ -1.09
SNF11YDR073W SIS2P36024 562 aa8.22□□□□□ -1.09
SNF11YDR073W DAN4P47179 1161 aa8.22□□□□□ -1.09
SNF11YDR073W HST2P53686 357 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms