RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W GEA1P47102 1408 aaPredicted RBP18.04■□□□□ 0.48
PTP1YDL230W IKI3Q06706 1349 aaKnown RBP18.03■□□□□ 0.48
PTP1YDL230W MTC1P47018 478 aaKnown RBP18.01■□□□□ 0.47
PTP1YDL230W SNT2P53127 1403 aa17.98■□□□□ 0.47
PTP1YDL230W DNF1P32660 1571 aa17.97■□□□□ 0.47
PTP1YDL230W RPA190P10964 1664 aaKnown RBP17.95■□□□□ 0.46
PTP1YDL230W NUP170P38181 1502 aa17.89■□□□□ 0.45
PTP1YDL230W TY3B-GQ99315 1547 aa17.88■□□□□ 0.45
PTP1YDL230W SSM4P40318 1319 aa17.88■□□□□ 0.45
PTP1YDL230W NTE1Q04958 1679 aa17.87■□□□□ 0.45
PTP1YDL230W RPO21P04050 1733 aaKnown RBP17.83■□□□□ 0.44
PTP1YDL230W RTT106P40161 455 aa17.78■□□□□ 0.44
PTP1YDL230W GEA2P39993 1459 aaKnown RBP17.75■□□□□ 0.43
PTP1YDL230W YBT1P32386 1661 aa17.75■□□□□ 0.43
PTP1YDL230W IRC20Q06554 1556 aa17.74■□□□□ 0.43
PTP1YDL230W NUP159P40477 1460 aa17.71■□□□□ 0.43
PTP1YDL230W VPS15P22219 1454 aa17.69■□□□□ 0.42
PTP1YDL230W CAT8P39113 1433 aa17.61■□□□□ 0.41
PTP1YDL230W YRF1-1P0CX20 1796 aa17.59■□□□□ 0.41
PTP1YDL230W YRF1-5P0CX21 1796 aa17.59■□□□□ 0.41
PTP1YDL230W YRF1-8P0CX22 1796 aa17.59■□□□□ 0.41
PTP1YDL230W GDB1Q06625 1536 aa17.57■□□□□ 0.4
PTP1YDL230W SPO14P36126 1683 aa17.54■□□□□ 0.4
PTP1YDL230W PDR10P51533 1564 aa17.51■□□□□ 0.39
PTP1YDL230W MET10P39692 1035 aa17.5■□□□□ 0.39
PTP1YDL230W ARO1P08566 1588 aaKnown RBP17.49■□□□□ 0.39
PTP1YDL230W PDR12Q02785 1511 aa17.49■□□□□ 0.39
PTP1YDL230W MET5P47169 1442 aa17.47■□□□□ 0.39
PTP1YDL230W NUP157P40064 1391 aaKnown RBP17.46■□□□□ 0.39
PTP1YDL230W CKB1P43639 278 aa17.45■□□□□ 0.38
PTP1YDL230W SRB8P25648 1427 aa17.42■□□□□ 0.38
PTP1YDL230W BUD3P25558 1636 aa17.4■□□□□ 0.38
PTP1YDL230W YSP2Q06681 1438 aa17.27■□□□□ 0.35
PTP1YDL230W BUD21Q08492 214 aaPredicted RBP17.22■□□□□ 0.35
PTP1YDL230W GCN2P15442 1659 aa17.21■□□□□ 0.35
PTP1YDL230W IQG1Q12280 1495 aa17.2■□□□□ 0.34
PTP1YDL230W MMS1Q06211 1407 aa17.15■□□□□ 0.34
PTP1YDL230W BNR1P40450 1375 aa17.07■□□□□ 0.32
PTP1YDL230W SEC7P11075 2009 aaKnown RBP17.06■□□□□ 0.32
PTP1YDL230W POL5P39985 1022 aaKnown RBP17.04■□□□□ 0.32
PTP1YDL230W LTE1P07866 1435 aa17.04■□□□□ 0.32
PTP1YDL230W YOR093CQ12275 1648 aa16.99■□□□□ 0.31
PTP1YDL230W NOP7P53261 605 aaKnown RBP16.98■□□□□ 0.31
PTP1YDL230W CHC1P22137 1653 aaKnown RBP16.94■□□□□ 0.3
PTP1YDL230W DOP1Q03921 1698 aa16.93■□□□□ 0.3
PTP1YDL230W DRS2P39524 1355 aa16.89■□□□□ 0.3
PTP1YDL230W PDR5P33302 1511 aaKnown RBP16.89■□□□□ 0.29
PTP1YDL230W PAF1P38351 445 aa16.87■□□□□ 0.29
PTP1YDL230W TRM3Q07527 1436 aa16.87■□□□□ 0.29
PTP1YDL230W NSR1P27476 414 aaKnown RBP RIP-Chip data16.84■□□□□ 0.29not detected
PTP1YDL230W VMR1P38735 1592 aa16.84■□□□□ 0.29
PTP1YDL230W BFR2Q06631 534 aaKnown RBP16.83■□□□□ 0.28
PTP1YDL230W PDR11P40550 1411 aa16.82■□□□□ 0.28
PTP1YDL230W ITT1Q04638 464 aa16.78■□□□□ 0.28
PTP1YDL230W BNI1P41832 1953 aa16.78■□□□□ 0.28
PTP1YDL230W ORC1P54784 914 aaPredicted RBP16.77■□□□□ 0.28
PTP1YDL230W NUP188P52593 1655 aaKnown RBP16.77■□□□□ 0.28
PTP1YDL230W RAV1P47104 1357 aa16.73■□□□□ 0.27
PTP1YDL230W IML1P47170 1584 aa16.72■□□□□ 0.27
PTP1YDL230W SPT7P35177 1332 aa16.7■□□□□ 0.26
PTP1YDL230W RTC1Q08281 1341 aa16.69■□□□□ 0.26
PTP1YDL230W DNF2Q12675 1612 aa16.67■□□□□ 0.26
PTP1YDL230W TAF5P38129 798 aa16.64■□□□□ 0.25
PTP1YDL230W SEC3P33332 1336 aaKnown RBP16.61■□□□□ 0.25
PTP1YDL230W TY3B-IQ7LHG5 1498 aaKnown RBP16.61■□□□□ 0.25
PTP1YDL230W NUP192P47054 1683 aa16.59■□□□□ 0.25
PTP1YDL230W TYS1P36421 394 aaKnown RBP16.58■□□□□ 0.24
PTP1YDL230W ENP1P38333 483 aaKnown RBP16.58■□□□□ 0.24
PTP1YDL230W MHP1P43638 1398 aa16.57■□□□□ 0.24
PTP1YDL230W IPL1P38991 367 aa16.52■□□□□ 0.24
PTP1YDL230W LEU3P08638 886 aa16.51■□□□□ 0.23
PTP1YDL230W ESL2P36168 1195 aa16.5■□□□□ 0.23
PTP1YDL230W PSD2P53037 1138 aaKnown RBP16.49■□□□□ 0.23
PTP1YDL230W KIP3P53086 805 aaKnown RBP16.49■□□□□ 0.23
PTP1YDL230W YLR419WQ06698 1435 aaKnown RBP16.47■□□□□ 0.23
PTP1YDL230W URN1Q06525 465 aaKnown RBP16.46■□□□□ 0.23
PTP1YDL230W PDS5Q04264 1277 aa16.4■□□□□ 0.22
PTP1YDL230W YAP3P38749 330 aa16.38■□□□□ 0.21
PTP1YDL230W RAD9P14737 1309 aa16.36■□□□□ 0.21
PTP1YDL230W SPE2P21182 396 aa16.34■□□□□ 0.21
PTP1YDL230W ALD4P46367 519 aaKnown RBP16.32■□□□□ 0.2
PTP1YDL230W NST1P53935 1240 aa16.32■□□□□ 0.2
PTP1YDL230W BCK1Q01389 1478 aa16.31■□□□□ 0.2
PTP1YDL230W TAF8Q03750 510 aa16.31■□□□□ 0.2
PTP1YDL230W CAB1Q04430 367 aa16.28■□□□□ 0.2
PTP1YDL230W NOP2P40991 618 aaKnown RBP16.27■□□□□ 0.2
PTP1YDL230W PRS1P32895 427 aaKnown RBP16.25■□□□□ 0.19
PTP1YDL230W DNF3Q12674 1656 aa16.23■□□□□ 0.19
PTP1YDL230W RTG3P38165 486 aa16.19■□□□□ 0.18
PTP1YDL230W CHZ1P40019 153 aaPredicted RBP16.18■□□□□ 0.18
PTP1YDL230W HAP1P0CE41 1502 aa16.18■□□□□ 0.18
PTP1YDL230W MLP1Q02455 1875 aaKnown RBP16.17■□□□□ 0.18
PTP1YDL230W KRE5P22023 1365 aa16.15■□□□□ 0.18
PTP1YDL230W SCT1P32784 759 aa16.14■□□□□ 0.17
PTP1YDL230W NAP1P25293 417 aaKnown RBP16.11■□□□□ 0.17
PTP1YDL230W MRX12P47084 519 aa16.11■□□□□ 0.17
PTP1YDL230W FKH1P40466 484 aa16.1■□□□□ 0.17
PTP1YDL230W RIA1P53893 1110 aa16.08■□□□□ 0.16
PTP1YDL230W YML133CQ03099 1374 aa16.04■□□□□ 0.16
PTP1YDL230W YLL067CQ07888 1374 aa16.04■□□□□ 0.16
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms