RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W STS1P38637 319 aa8.43□□□□□ -1.06
SLX5YDL013W NOP53Q12080 455 aaKnown RBP8.43□□□□□ -1.06
SLX5YDL013W THO2P53552 1597 aaKnown RBP8.42□□□□□ -1.06
SLX5YDL013W BUD4P47136 1447 aa8.41□□□□□ -1.06
SLX5YDL013W DBP1P24784 617 aaKnown RBP8.4□□□□□ -1.07
SLX5YDL013W EDS1P38073 919 aa8.4□□□□□ -1.07
SLX5YDL013W YFR006WP43590 535 aa8.38□□□□□ -1.07
SLX5YDL013W YNR021WP53723 404 aaKnown RBP8.38□□□□□ -1.07
SLX5YDL013W REF2P42073 533 aaPredicted RBP8.37□□□□□ -1.07
SLX5YDL013W MAM3Q12296 706 aa8.37□□□□□ -1.07
SLX5YDL013W REV3P14284 1504 aa8.36□□□□□ -1.07
SLX5YDL013W KIN1P13185 1064 aa8.35□□□□□ -1.07
SLX5YDL013W MNN4P36044 1178 aa8.35□□□□□ -1.07
SLX5YDL013W YOR238WQ08634 303 aa8.34□□□□□ -1.07
SLX5YDL013W GLC3P32775 704 aa8.32□□□□□ -1.08
SLX5YDL013W IES2P40154 320 aa8.32□□□□□ -1.08
SLX5YDL013W MDS3P53094 1487 aa8.32□□□□□ -1.08
SLX5YDL013W ABP1P15891 592 aaKnown RBP8.3□□□□□ -1.08
SLX5YDL013W PTC3P34221 468 aaKnown RBP8.3□□□□□ -1.08
SLX5YDL013W DIT2P21595 489 aa8.3□□□□□ -1.08
SLX5YDL013W NUP42P49686 430 aaKnown RBP8.3□□□□□ -1.08
SLX5YDL013W ATG2P53855 1592 aa8.29□□□□□ -1.08
SLX5YDL013W AIM7Q12156 149 aa8.29□□□□□ -1.08
SLX5YDL013W RLF2Q12495 606 aa8.29□□□□□ -1.08
SLX5YDL013W PEP1P32319 1579 aa8.27□□□□□ -1.08
SLX5YDL013W MAK21Q12176 1025 aaKnown RBP8.27□□□□□ -1.09
SLX5YDL013W TAF2P23255 1407 aa8.27□□□□□ -1.09
SLX5YDL013W COX6P00427 148 aa8.26□□□□□ -1.09
SLX5YDL013W SIN3P22579 1536 aa8.26□□□□□ -1.09
SLX5YDL013W CWC22P53333 577 aaKnown RBP8.25□□□□□ -1.09
SLX5YDL013W PIB1Q06651 286 aa8.24□□□□□ -1.09
SLX5YDL013W TIF4632P39936 914 aaKnown RBP8.23□□□□□ -1.09
SLX5YDL013W NSR1P27476 414 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
SLX5YDL013W SNU71P53207 620 aaKnown RBP8.23□□□□□ -1.09
SLX5YDL013W SSK2P53599 1579 aa8.22□□□□□ -1.09
SLX5YDL013W YAP5P40574 245 aa8.21□□□□□ -1.09
SLX5YDL013W TOP1P04786 769 aa8.21□□□□□ -1.1
SLX5YDL013W ATF2P53296 535 aa8.19□□□□□ -1.1
SLX5YDL013W VMA1P17255 1071 aaKnown RBP8.19□□□□□ -1.1
SLX5YDL013W GUA1P38625 525 aaKnown RBP8.19□□□□□ -1.1
SLX5YDL013W HGH1P48362 394 aaKnown RBP8.19□□□□□ -1.1
SLX5YDL013W VHR2P40041 505 aa8.18□□□□□ -1.1
SLX5YDL013W SKI3P17883 1432 aaKnown RBP8.18□□□□□ -1.1
SLX5YDL013W ESP1Q03018 1630 aa8.17□□□□□ -1.1
SLX5YDL013W UBP14P38237 781 aaKnown RBP8.16□□□□□ -1.1
SLX5YDL013W TGL3P40308 642 aa8.16□□□□□ -1.1
SLX5YDL013W YDR090CQ03193 310 aa8.16□□□□□ -1.1
SLX5YDL013W DEF1P35732 738 aaKnown RBP8.15□□□□□ -1.1
SLX5YDL013W ATH1P48016 1211 aa8.15□□□□□ -1.1
SLX5YDL013W GRE2Q12068 342 aaKnown RBP8.15□□□□□ -1.11
SLX5YDL013W GUT1P32190 709 aa8.13□□□□□ -1.11
SLX5YDL013W ORC1P54784 914 aaPredicted RBP8.12□□□□□ -1.11
SLX5YDL013W YLR326WQ06170 240 aaKnown RBP8.12□□□□□ -1.11
SLX5YDL013W PSH1Q12161 406 aa8.1□□□□□ -1.11
SLX5YDL013W KIC1P38692 1080 aa8.09□□□□□ -1.12
SLX5YDL013W YGR273CP53329 174 aa8.08□□□□□ -1.12
SLX5YDL013W HPC2Q01448 625 aa8.08□□□□□ -1.12
SLX5YDL013W SAM3Q08986 587 aa8.07□□□□□ -1.12
SLX5YDL013W BPT1P14772 1559 aa8.07□□□□□ -1.12
SLX5YDL013W MYO2P19524 1574 aaKnown RBP8.07□□□□□ -1.12
SLX5YDL013W MDG1P53885 366 aa8.06□□□□□ -1.12
SLX5YDL013W RLP24Q07915 199 aaKnown RBP8.06□□□□□ -1.12
SLX5YDL013W GYP5Q12344 894 aa8.04□□□□□ -1.12
SLX5YDL013W YPK9Q12697 1472 aa8.04□□□□□ -1.12
SLX5YDL013W KEX1P09620 729 aa8.04□□□□□ -1.12
SLX5YDL013W RAD54P32863 898 aa8.04□□□□□ -1.12
SLX5YDL013W PCS60P38137 543 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
SLX5YDL013W TFB3Q03290 321 aa8.04□□□□□ -1.12
SLX5YDL013W PSE1P32337 1089 aaKnown RBP8.03□□□□□ -1.12
SLX5YDL013W SOL3P38858 249 aa8.03□□□□□ -1.12
SLX5YDL013W SCC2Q04002 1493 aa8.02□□□□□ -1.13
SLX5YDL013W UFD4P33202 1483 aa8.01□□□□□ -1.13
SLX5YDL013W ENV11P53246 860 aa8□□□□□ -1.13
SLX5YDL013W MST1P07236 462 aa7.99□□□□□ -1.13
SLX5YDL013W BRL1P38770 471 aa7.99□□□□□ -1.13
SLX5YDL013W CSN12P47130 423 aa7.98□□□□□ -1.13
SLX5YDL013W SSA2P10592 639 aaKnown RBP7.98□□□□□ -1.13
SLX5YDL013W GTT3P39996 337 aa7.98□□□□□ -1.13
SLX5YDL013W PKC1P24583 1151 aa7.96□□□□□ -1.13
SLX5YDL013W DCW1P36091 449 aa7.96□□□□□ -1.13
SLX5YDL013W NUG1P40010 520 aaKnown RBP7.96□□□□□ -1.13
SLX5YDL013W RPO31P04051 1460 aa7.96□□□□□ -1.14
SLX5YDL013W ORC6P38826 435 aa7.95□□□□□ -1.14
SLX5YDL013W NST1P53935 1240 aa7.95□□□□□ -1.14
SLX5YDL013W YCF1P39109 1515 aaKnown RBP7.95□□□□□ -1.14
SLX5YDL013W TEA1P47988 759 aa7.94□□□□□ -1.14
SLX5YDL013W TCB2P48231 1178 aa7.93□□□□□ -1.14
SLX5YDL013W YOL036WQ08206 761 aa7.93□□□□□ -1.14
SLX5YDL013W TY2B-LR1P0C2J3 1770 aa7.92□□□□□ -1.14
SLX5YDL013W TY2B-FP0CX63 1770 aa7.92□□□□□ -1.14
SLX5YDL013W TY2B-GR2P0CX64 1770 aa7.92□□□□□ -1.14
SLX5YDL013W TY2B-CP25384 1770 aa7.92□□□□□ -1.14
SLX5YDL013W TY2B-DR2Q03494 1770 aa7.92□□□□□ -1.14
SLX5YDL013W TY1B-DR1Q03855 1755 aa7.92□□□□□ -1.14
SLX5YDL013W TY2B-DR3Q07791 1770 aaKnown RBP7.92□□□□□ -1.14
SLX5YDL013W TY2B-OR1Q12113 1770 aa7.92□□□□□ -1.14
SLX5YDL013W TY2B-DR1Q12472 1770 aa7.92□□□□□ -1.14
SLX5YDL013W TY2B-OR2Q12501 1770 aa7.92□□□□□ -1.14
SLX5YDL013W SET4P42948 560 aa7.92□□□□□ -1.14
SLX5YDL013W HSP82P02829 709 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms