RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W SOL3P38858 249 aa7.52□□□□□ -1.2
YCL020WYCL020W YPR148CQ06523 435 aa7.52□□□□□ -1.2
YCL020WYCL020W GUT1P32190 709 aa7.52□□□□□ -1.21
YCL020WYCL020W NOP53Q12080 455 aaKnown RBP7.51□□□□□ -1.21
YCL020WYCL020W HTA1P04911 132 aaKnown RBP7.49□□□□□ -1.21
YCL020WYCL020W HTA2P04912 132 aa7.49□□□□□ -1.21
YCL020WYCL020W NST1P53935 1240 aa7.47□□□□□ -1.21
YCL020WYCL020W EAP1P36041 632 aaKnown RBP7.46□□□□□ -1.22
YCL020WYCL020W YEL023CP39992 682 aa7.46□□□□□ -1.22
YCL020WYCL020W ILV3P39522 585 aaKnown RBP7.45□□□□□ -1.22
YCL020WYCL020W YGR273CP53329 174 aa7.45□□□□□ -1.22
YCL020WYCL020W IFH1P39520 1085 aa7.44□□□□□ -1.22
YCL020WYCL020W VHR2P40041 505 aa7.44□□□□□ -1.22
YCL020WYCL020W ABP1P15891 592 aaKnown RBP7.43□□□□□ -1.22
YCL020WYCL020W RTG1P32607 177 aa7.42□□□□□ -1.22
YCL020WYCL020W NCR1Q12200 1170 aa7.4□□□□□ -1.22
YCL020WYCL020W DAN4P47179 1161 aa7.39□□□□□ -1.23
YCL020WYCL020W YLR326WQ06170 240 aaKnown RBP7.39□□□□□ -1.23
YCL020WYCL020W UBP14P38237 781 aaKnown RBP7.38□□□□□ -1.23
YCL020WYCL020W PTC4P38089 393 aa7.37□□□□□ -1.23
YCL020WYCL020W REF2P42073 533 aaPredicted RBP7.37□□□□□ -1.23
YCL020WYCL020W YNL035CP53962 389 aaKnown RBP7.37□□□□□ -1.23
YCL020WYCL020W KEX1P09620 729 aa7.36□□□□□ -1.23
YCL020WYCL020W SEC61P32915 480 aa7.35□□□□□ -1.23
YCL020WYCL020W MPH3P0CE00 602 aa7.34□□□□□ -1.23
YCL020WYCL020W CKB1P43639 278 aa7.34□□□□□ -1.23
YCL020WYCL020W YDR090CQ03193 310 aa7.34□□□□□ -1.23
YCL020WYCL020W PBS2P08018 668 aa7.33□□□□□ -1.24
YCL020WYCL020W SPB4P25808 606 aaPredicted RBP7.33□□□□□ -1.24
YCL020WYCL020W JIP4Q03361 876 aa7.33□□□□□ -1.24
YCL020WYCL020W BCK2P33306 851 aa7.32□□□□□ -1.24
YCL020WYCL020W PCS60P38137 543 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
YCL020WYCL020W MID1P41821 548 aa7.32□□□□□ -1.24
YCL020WYCL020W AI4P03878 556 aa7.31□□□□□ -1.24
YCL020WYCL020W PML39Q03760 334 aa7.31□□□□□ -1.24
YCL020WYCL020W RAD54P32863 898 aa7.28□□□□□ -1.24
YCL020WYCL020W SLI15P38283 698 aa7.28□□□□□ -1.24
YCL020WYCL020W YDR344CQ05510 147 aa7.27□□□□□ -1.24
YCL020WYCL020W DSF2P38213 736 aa7.25□□□□□ -1.25
YCL020WYCL020W COX6P00427 148 aa7.24□□□□□ -1.25
YCL020WYCL020W SAP30P38429 201 aa7.24□□□□□ -1.25
YCL020WYCL020W KIC1P38692 1080 aa7.23□□□□□ -1.25
YCL020WYCL020W IES2P40154 320 aa7.23□□□□□ -1.25
YCL020WYCL020W TFG1P41895 735 aaPredicted RBP7.23□□□□□ -1.25
YCL020WYCL020W CDC73Q06697 393 aa7.23□□□□□ -1.25
YCL020WYCL020W MAM3Q12296 706 aa7.23□□□□□ -1.25
YCL020WYCL020W CHL1P22516 861 aaPredicted RBP7.22□□□□□ -1.25
YCL020WYCL020W YDL129WQ07555 291 aa7.22□□□□□ -1.25
YCL020WYCL020W RGA2Q06407 1009 aa7.2□□□□□ -1.26
YCL020WYCL020W PEX29Q03370 554 aa7.19□□□□□ -1.26
YCL020WYCL020W DIT2P21595 489 aa7.18□□□□□ -1.26
YCL020WYCL020W MPC54Q08550 464 aa7.18□□□□□ -1.26
YCL020WYCL020W MAK21Q12176 1025 aaKnown RBP7.18□□□□□ -1.26
YCL020WYCL020W NUP42P49686 430 aaKnown RBP7.17□□□□□ -1.26
YCL020WYCL020W ORC6P38826 435 aa7.16□□□□□ -1.26
YCL020WYCL020W PRE3P38624 215 aa7.15□□□□□ -1.26
YCL020WYCL020W LEU3P08638 886 aa7.13□□□□□ -1.27
YCL020WYCL020W DPL1Q05567 589 aa7.12□□□□□ -1.27
YCL020WYCL020W GLC3P32775 704 aa7.1□□□□□ -1.27
YCL020WYCL020W NMA111P53920 997 aa7.1□□□□□ -1.27
YCL020WYCL020W XDJ1P39102 459 aa7.09□□□□□ -1.27
YCL020WYCL020W GAP1P19145 602 aaPredicted RBP7.08□□□□□ -1.28
YCL020WYCL020W ELP4Q02884 456 aaKnown RBP7.07□□□□□ -1.28
YCL020WYCL020W PDR1P12383 1068 aa7.06□□□□□ -1.28
YCL020WYCL020W RGR1P19263 1082 aa7.06□□□□□ -1.28
YCL020WYCL020W ARH1P48360 493 aa7.06□□□□□ -1.28
YCL020WYCL020W MVP1P40959 511 aaKnown RBP7.05□□□□□ -1.28
YCL020WYCL020W HAP5Q02516 242 aa7.04□□□□□ -1.28
YCL020WYCL020W TUM1Q08686 304 aaKnown RBP7.03□□□□□ -1.28
YCL020WYCL020W YRR1Q12172 810 aa7.03□□□□□ -1.28
YCL020WYCL020W PSE1P32337 1089 aaKnown RBP7.02□□□□□ -1.28
YCL020WYCL020W PEX21P50091 288 aa7.02□□□□□ -1.28
YCL020WYCL020W YNR021WP53723 404 aaKnown RBP7.02□□□□□ -1.28
YCL020WYCL020W ISU2Q12056 156 aa7.02□□□□□ -1.28
YCL020WYCL020W YPR109WQ06104 294 aa7.01□□□□□ -1.29
YCL020WYCL020W CSC1Q06538 782 aa7.01□□□□□ -1.29
YCL020WYCL020W RPP1BP10622 106 aaKnown RBP7.01□□□□□ -1.29
YCL020WYCL020W VRP1P37370 817 aa7.01□□□□□ -1.29
YCL020WYCL020W YPR015CQ12531 247 aa6.99□□□□□ -1.29
YCL020WYCL020W DPS1P04802 557 aaKnown RBP6.98□□□□□ -1.29
YCL020WYCL020W ATF2P53296 535 aa6.98□□□□□ -1.29
YCL020WYCL020W TFB4Q12004 338 aa6.98□□□□□ -1.29
YCL020WYCL020W RPN1P38764 993 aaKnown RBP6.97□□□□□ -1.29
YCL020WYCL020W RGA1P39083 1007 aa6.97□□□□□ -1.29
YCL020WYCL020W RAM1P22007 431 aa6.96□□□□□ -1.3
YCL020WYCL020W SPT23P35210 1082 aa6.96□□□□□ -1.3
YCL020WYCL020W BNI4P53858 892 aa6.95□□□□□ -1.3
YCL020WYCL020W KIN1P13185 1064 aa6.94□□□□□ -1.3
YCL020WYCL020W TEA1P47988 759 aa6.94□□□□□ -1.3
YCL020WYCL020W NUD1P32336 851 aa6.93□□□□□ -1.3
YCL020WYCL020W PTC2P39966 464 aaKnown RBP6.93□□□□□ -1.3
YCL020WYCL020W STR2P47164 639 aa6.93□□□□□ -1.3
YCL020WYCL020W ISM1P48526 1002 aa6.92□□□□□ -1.3
YCL020WYCL020W NIS1P53939 407 aa6.92□□□□□ -1.3
YCL020WYCL020W ERF2Q06551 359 aa6.92□□□□□ -1.3
YCL020WYCL020W AIM7Q12156 149 aa6.9□□□□□ -1.3
YCL020WYCL020W KEX2P13134 814 aa6.89□□□□□ -1.31
YCL020WYCL020W SCJ1P25303 377 aa6.89□□□□□ -1.31
YCL020WYCL020W LEO1P38439 464 aa6.89□□□□□ -1.31
YCL020WYCL020W TYW1Q08960 810 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms