RNA–Protein interactions for RNA: YCL010C

SGF29, Transcript of Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes, yeastyeast

Gene SGF29, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF29YCL010C YRF1-5P0CX21 1796 aa10.06□□□□□ -0.8
SGF29YCL010C YRF1-8P0CX22 1796 aa10.06□□□□□ -0.8
SGF29YCL010C SNQ2P32568 1501 aaKnown RBP10.02□□□□□ -0.8
SGF29YCL010C SAS10Q12136 610 aaPredicted RBP10.02□□□□□ -0.81
SGF29YCL010C MLP2P40457 1679 aa10□□□□□ -0.81
SGF29YCL010C VPS15P22219 1454 aa9.99□□□□□ -0.81
SGF29YCL010C LTE1P07866 1435 aa9.99□□□□□ -0.81
SGF29YCL010C ULS1Q08562 1619 aa9.97□□□□□ -0.81
SGF29YCL010C GEA2P39993 1459 aaKnown RBP9.96□□□□□ -0.82
SGF29YCL010C PDR15Q04182 1529 aaKnown RBP9.94□□□□□ -0.82
SGF29YCL010C STH1P32597 1359 aa9.94□□□□□ -0.82
SGF29YCL010C SNT2P53127 1403 aa9.9□□□□□ -0.82
SGF29YCL010C BNI1P41832 1953 aa9.9□□□□□ -0.82
SGF29YCL010C SPO14P36126 1683 aa9.9□□□□□ -0.83
SGF29YCL010C RTT106P40161 455 aa9.88□□□□□ -0.83
SGF29YCL010C IFH1P39520 1085 aa9.86□□□□□ -0.83
SGF29YCL010C ITT1Q04638 464 aa9.86□□□□□ -0.83
SGF29YCL010C DRS2P39524 1355 aa9.83□□□□□ -0.84
SGF29YCL010C NUP170P38181 1502 aa9.82□□□□□ -0.84
SGF29YCL010C IRC20Q06554 1556 aa9.8□□□□□ -0.84
SGF29YCL010C GDB1Q06625 1536 aa9.79□□□□□ -0.84
SGF29YCL010C MMS1Q06211 1407 aa9.79□□□□□ -0.84
SGF29YCL010C MET10P39692 1035 aa9.78□□□□□ -0.84
SGF29YCL010C DOP1Q03921 1698 aa9.77□□□□□ -0.84
SGF29YCL010C PDR12Q02785 1511 aa9.77□□□□□ -0.85
SGF29YCL010C NUP157P40064 1391 aaKnown RBP9.76□□□□□ -0.85
SGF29YCL010C GEA1P47102 1408 aaPredicted RBP9.74□□□□□ -0.85
SGF29YCL010C TY3B-GQ99315 1547 aa9.73□□□□□ -0.85
SGF29YCL010C YBT1P32386 1661 aa9.73□□□□□ -0.85
SGF29YCL010C PDR10P51533 1564 aa9.71□□□□□ -0.85
SGF29YCL010C TAF7Q05021 590 aa9.71□□□□□ -0.86
SGF29YCL010C IQG1Q12280 1495 aa9.71□□□□□ -0.86
SGF29YCL010C BUD3P25558 1636 aa9.7□□□□□ -0.86
SGF29YCL010C DNF2Q12675 1612 aa9.67□□□□□ -0.86
SGF29YCL010C ARO1P08566 1588 aaKnown RBP9.64□□□□□ -0.87
SGF29YCL010C ABP1P15891 592 aaKnown RBP9.64□□□□□ -0.87
SGF29YCL010C CKB1P43639 278 aa9.61□□□□□ -0.87
SGF29YCL010C CHC1P22137 1653 aaKnown RBP9.61□□□□□ -0.87
SGF29YCL010C CAT8P39113 1433 aa9.6□□□□□ -0.87
SGF29YCL010C TRM3Q07527 1436 aa9.59□□□□□ -0.87
SGF29YCL010C MIF2P35201 549 aa9.54□□□□□ -0.88
SGF29YCL010C YSP2Q06681 1438 aa9.5□□□□□ -0.89
SGF29YCL010C YOR093CQ12275 1648 aa9.48□□□□□ -0.89
SGF29YCL010C BNR1P40450 1375 aa9.47□□□□□ -0.89
SGF29YCL010C SEC7P11075 2009 aaKnown RBP9.46□□□□□ -0.9
SGF29YCL010C SRB8P25648 1427 aa9.44□□□□□ -0.9
SGF29YCL010C SSM4P40318 1319 aa9.39□□□□□ -0.91
SGF29YCL010C DNF3Q12674 1656 aa9.39□□□□□ -0.91
SGF29YCL010C IKI3Q06706 1349 aaKnown RBP9.38□□□□□ -0.91
SGF29YCL010C BUD21Q08492 214 aaPredicted RBP9.36□□□□□ -0.91
SGF29YCL010C VMR1P38735 1592 aa9.32□□□□□ -0.92
SGF29YCL010C YFR006WP43590 535 aa9.3□□□□□ -0.92
SGF29YCL010C NUP188P52593 1655 aaKnown RBP9.29□□□□□ -0.92
SGF29YCL010C YAP3P38749 330 aa9.27□□□□□ -0.93
SGF29YCL010C IML1P47170 1584 aa9.24□□□□□ -0.93
SGF29YCL010C PDR5P33302 1511 aaKnown RBP9.24□□□□□ -0.93
SGF29YCL010C USO1P25386 1790 aa9.23□□□□□ -0.93
SGF29YCL010C TYS1P36421 394 aaKnown RBP9.22□□□□□ -0.93
SGF29YCL010C GCN2P15442 1659 aa9.2□□□□□ -0.94
SGF29YCL010C IPL1P38991 367 aa9.17□□□□□ -0.94
SGF29YCL010C MAK10Q02197 733 aa9.17□□□□□ -0.94
SGF29YCL010C URN1Q06525 465 aaKnown RBP9.17□□□□□ -0.94
SGF29YCL010C PDR11P40550 1411 aa9.16□□□□□ -0.94
SGF29YCL010C KRE5P22023 1365 aa9.03□□□□□ -0.96
SGF29YCL010C PAF1P38351 445 aa9.02□□□□□ -0.97
SGF29YCL010C NUP192P47054 1683 aa9.01□□□□□ -0.97
SGF29YCL010C NOP7P53261 605 aaKnown RBP9□□□□□ -0.97
SGF29YCL010C HAP1P0CE41 1502 aa9□□□□□ -0.97
SGF29YCL010C TY1B-NL2Q99337 1749 aaKnown RBP9□□□□□ -0.97
SGF29YCL010C RAV1P47104 1357 aa8.99□□□□□ -0.97
SGF29YCL010C THI12P42883 340 aa8.99□□□□□ -0.97
SGF29YCL010C THI5P43534 340 aa8.99□□□□□ -0.97
SGF29YCL010C THI11P47183 340 aa8.99□□□□□ -0.97
SGF29YCL010C THI13Q07748 340 aa8.99□□□□□ -0.97
SGF29YCL010C RIA1P53893 1110 aa8.98□□□□□ -0.97
SGF29YCL010C BFR2Q06631 534 aaKnown RBP8.98□□□□□ -0.97
SGF29YCL010C FAP1P53971 965 aa8.96□□□□□ -0.98
SGF29YCL010C RAD9P14737 1309 aa8.96□□□□□ -0.98
SGF29YCL010C MRX12P47084 519 aa8.95□□□□□ -0.98
SGF29YCL010C CAB1Q04430 367 aa8.95□□□□□ -0.98
SGF29YCL010C BCK1Q01389 1478 aa8.94□□□□□ -0.98
SGF29YCL010C RTC1Q08281 1341 aa8.92□□□□□ -0.98
SGF29YCL010C TAF5P38129 798 aa8.91□□□□□ -0.98
SGF29YCL010C YMR196WQ04336 1088 aa8.89□□□□□ -0.99
SGF29YCL010C CFT1Q06632 1357 aaKnown RBP8.88□□□□□ -0.99
SGF29YCL010C TY3B-IQ7LHG5 1498 aaKnown RBP8.86□□□□□ -0.99
SGF29YCL010C YNR029CP53729 429 aaKnown RBP8.86□□□□□ -0.99
SGF29YCL010C ORC1P54784 914 aaPredicted RBP8.86□□□□□ -0.99
SGF29YCL010C ALD4P46367 519 aaKnown RBP8.85□□□□□ -0.99
SGF29YCL010C TAF8Q03750 510 aa8.82□□□□□ -1
SGF29YCL010C RCM1P53972 490 aa8.79□□□□□ -1
SGF29YCL010C ESL2P36168 1195 aa8.78□□□□□ -1
SGF29YCL010C KIP3P53086 805 aaKnown RBP8.78□□□□□ -1
SGF29YCL010C APP1P53933 587 aa8.75□□□□□ -1.01
SGF29YCL010C NAP1P25293 417 aaKnown RBP8.73□□□□□ -1.01
SGF29YCL010C PPH3P32345 308 aa8.73□□□□□ -1.01
SGF29YCL010C SPE2P21182 396 aa8.72□□□□□ -1.01
SGF29YCL010C TY4B-HP0C2J7 1802 aa8.72□□□□□ -1.01
SGF29YCL010C TY4B-JP47024 1803 aa8.72□□□□□ -1.01
SGF29YCL010C YLR419WQ06698 1435 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms