RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W CHL1P22516 861 aaPredicted RBP11.14□□□□□ -0.63
RER1YCL001W HTA1P04911 132 aaKnown RBP11.11□□□□□ -0.63
RER1YCL001W HTA2P04912 132 aa11.11□□□□□ -0.63
RER1YCL001W MIF2P35201 549 aa11.09□□□□□ -0.63
RER1YCL001W DCW1P36091 449 aa11.09□□□□□ -0.63
RER1YCL001W EDS1P38073 919 aa11.07□□□□□ -0.64
RER1YCL001W PRE3P38624 215 aa11.07□□□□□ -0.64
RER1YCL001W GRE2Q12068 342 aaKnown RBP11.07□□□□□ -0.64
RER1YCL001W PTC4P38089 393 aa11.05□□□□□ -0.64
RER1YCL001W COQ8P27697 501 aa11.04□□□□□ -0.64
RER1YCL001W PTC3P34221 468 aaKnown RBP11.04□□□□□ -0.64
RER1YCL001W YEL023CP39992 682 aa11.03□□□□□ -0.64
RER1YCL001W GUT1P32190 709 aa10.98□□□□□ -0.65
RER1YCL001W ATH1P48016 1211 aa10.98□□□□□ -0.65
RER1YCL001W NOP53Q12080 455 aaKnown RBP10.94□□□□□ -0.66
RER1YCL001W NST1P53935 1240 aa10.87□□□□□ -0.67
RER1YCL001W XDJ1P39102 459 aa10.86□□□□□ -0.67
RER1YCL001W VRP1P37370 817 aa10.83□□□□□ -0.68
RER1YCL001W SOL3P38858 249 aa10.83□□□□□ -0.68
RER1YCL001W PML39Q03760 334 aa10.81□□□□□ -0.68
RER1YCL001W ELP4Q02884 456 aaKnown RBP10.79□□□□□ -0.68
RER1YCL001W YDR344CQ05510 147 aa10.77□□□□□ -0.69
RER1YCL001W AI4P03878 556 aa10.76□□□□□ -0.69
RER1YCL001W MPH3P0CE00 602 aa10.76□□□□□ -0.69
RER1YCL001W YGR273CP53329 174 aa10.74□□□□□ -0.69
RER1YCL001W SET1P38827 1080 aaKnown RBP10.72□□□□□ -0.69
RER1YCL001W ILV3P39522 585 aaKnown RBP10.7□□□□□ -0.7
RER1YCL001W ARH1P48360 493 aa10.7□□□□□ -0.7
RER1YCL001W DPS1P04802 557 aaKnown RBP10.67□□□□□ -0.7
RER1YCL001W MID1P41821 548 aa10.66□□□□□ -0.7
RER1YCL001W SPT23P35210 1082 aa10.58□□□□□ -0.72
RER1YCL001W PEX29Q03370 554 aa10.58□□□□□ -0.72
RER1YCL001W KEX1P09620 729 aa10.53□□□□□ -0.72
RER1YCL001W SLI15P38283 698 aa10.52□□□□□ -0.73
RER1YCL001W IFH1P39520 1085 aa10.52□□□□□ -0.73
RER1YCL001W HAP5Q02516 242 aa10.51□□□□□ -0.73
RER1YCL001W MPC54Q08550 464 aa10.5□□□□□ -0.73
RER1YCL001W YLR326WQ06170 240 aaKnown RBP10.48□□□□□ -0.73
RER1YCL001W UBP14P38237 781 aaKnown RBP10.47□□□□□ -0.73
RER1YCL001W BNI4P53858 892 aa10.47□□□□□ -0.73
RER1YCL001W YPR148CQ06523 435 aa10.46□□□□□ -0.73
RER1YCL001W VHR2P40041 505 aa10.45□□□□□ -0.74
RER1YCL001W YML082WQ04533 649 aaKnown RBP10.43□□□□□ -0.74
RER1YCL001W DPL1Q05567 589 aa10.43□□□□□ -0.74
RER1YCL001W PTC2P39966 464 aaKnown RBP10.42□□□□□ -0.74
RER1YCL001W NMA111P53920 997 aa10.41□□□□□ -0.74
RER1YCL001W SRC1Q03707 834 aa10.39□□□□□ -0.75
RER1YCL001W PCS60P38137 543 aaKnown RBP RIP-Chip data10.38□□□□□ -0.75not detected
RER1YCL001W RAD54P32863 898 aa10.37□□□□□ -0.75
RER1YCL001W YDR090CQ03193 310 aa10.34□□□□□ -0.75
RER1YCL001W CDC73Q06697 393 aa10.34□□□□□ -0.75
RER1YCL001W ISU2Q12056 156 aa10.33□□□□□ -0.76
RER1YCL001W REF2P42073 533 aaPredicted RBP10.32□□□□□ -0.76
RER1YCL001W VPS70P47161 811 aa10.29□□□□□ -0.76
RER1YCL001W RGA2Q06407 1009 aa10.28□□□□□ -0.76
RER1YCL001W RPP1BP10622 106 aaKnown RBP10.27□□□□□ -0.77
RER1YCL001W KIC1P38692 1080 aa10.27□□□□□ -0.77
RER1YCL001W RAM1P22007 431 aa10.23□□□□□ -0.77
RER1YCL001W YPR015CQ12531 247 aa10.2□□□□□ -0.78
RER1YCL001W RGA1P39083 1007 aa10.19□□□□□ -0.78
RER1YCL001W MAK21Q12176 1025 aaKnown RBP10.19□□□□□ -0.78
RER1YCL001W GAP1P19145 602 aaPredicted RBP10.17□□□□□ -0.78
RER1YCL001W COX6P00427 148 aa10.16□□□□□ -0.78
RER1YCL001W PDR1P12383 1068 aa10.16□□□□□ -0.78
RER1YCL001W DMA1P38823 416 aa10.16□□□□□ -0.78
RER1YCL001W RAS1P01119 309 aa10.15□□□□□ -0.78
RER1YCL001W ORC6P38826 435 aa10.13□□□□□ -0.79
RER1YCL001W CKB1P43639 278 aa10.13□□□□□ -0.79
RER1YCL001W CSC1Q06538 782 aa10.13□□□□□ -0.79
RER1YCL001W PEX21P50091 288 aa10.11□□□□□ -0.79
RER1YCL001W TFB4Q12004 338 aa10.11□□□□□ -0.79
RER1YCL001W SAS10Q12136 610 aaPredicted RBP10.08□□□□□ -0.8
RER1YCL001W YRR1Q12172 810 aa10.08□□□□□ -0.8
RER1YCL001W GYP1Q08484 637 aa10.07□□□□□ -0.8
RER1YCL001W AMS1P22855 1083 aa10.06□□□□□ -0.8
RER1YCL001W PBS2P08018 668 aa10.03□□□□□ -0.8
RER1YCL001W TRK1P12685 1235 aa10.03□□□□□ -0.8
RER1YCL001W SAS4Q04003 481 aa10.02□□□□□ -0.81
RER1YCL001W TUM1Q08686 304 aaKnown RBP10.02□□□□□ -0.81
RER1YCL001W MVP1P40959 511 aaKnown RBP9.99□□□□□ -0.81
RER1YCL001W BUD20Q08004 166 aaPredicted RBP9.98□□□□□ -0.81
RER1YCL001W NUD1P32336 851 aa9.97□□□□□ -0.81
RER1YCL001W STR2P47164 639 aa9.97□□□□□ -0.81
RER1YCL001W RGR1P19263 1082 aa9.95□□□□□ -0.82
RER1YCL001W SDH2P21801 266 aa9.94□□□□□ -0.82
RER1YCL001W ISM1P48526 1002 aa9.94□□□□□ -0.82
RER1YCL001W PRT1P06103 763 aaKnown RBP9.93□□□□□ -0.82
RER1YCL001W DSF2P38213 736 aa9.92□□□□□ -0.82
RER1YCL001W MAM3Q12296 706 aa9.92□□□□□ -0.82
RER1YCL001W YPR109WQ06104 294 aa9.91□□□□□ -0.82
RER1YCL001W YEL077CQ3E7X8 1277 aa9.91□□□□□ -0.82
RER1YCL001W PSE1P32337 1089 aaKnown RBP9.9□□□□□ -0.82
RER1YCL001W NPL4P33755 580 aa9.9□□□□□ -0.82
RER1YCL001W MRF1P30775 413 aaPredicted RBP9.87□□□□□ -0.83
RER1YCL001W TY1A-DR4O74302 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-HP0C2I4 478 aaKnown RBP9.84□□□□□ -0.83
RER1YCL001W TY1A-AP0CX57 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-PR1P0CX58 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-ORP0CX59 440 aa9.84□□□□□ -0.83
RER1YCL001W TY1A-PR2P0CX60 440 aa9.84□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms