RNA–Protein interactions for RNA: YBR214W

SDS24, Transcript of Protein involved in cell separation during budding, yeastyeast

Gene SDS24, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS24YBR214W YRF1-8P0CX22 1796 aa13.03□□□□□ -0.32
SDS24YBR214W NUP159P40477 1460 aa13□□□□□ -0.33
SDS24YBR214W MLP2P40457 1679 aa13□□□□□ -0.33
SDS24YBR214W SNQ2P32568 1501 aaKnown RBP12.99□□□□□ -0.33
SDS24YBR214W SAS10Q12136 610 aaPredicted RBP12.95□□□□□ -0.34
SDS24YBR214W STH1P32597 1359 aa12.93□□□□□ -0.34
SDS24YBR214W ULS1Q08562 1619 aa12.9□□□□□ -0.34
SDS24YBR214W SNT2P53127 1403 aa12.9□□□□□ -0.34
SDS24YBR214W LTE1P07866 1435 aa12.89□□□□□ -0.35
SDS24YBR214W PDR15Q04182 1529 aaKnown RBP12.87□□□□□ -0.35
SDS24YBR214W VPS15P22219 1454 aa12.86□□□□□ -0.35
SDS24YBR214W GEA2P39993 1459 aaKnown RBP12.82□□□□□ -0.36
SDS24YBR214W RTT106P40161 455 aa12.79□□□□□ -0.36
SDS24YBR214W TAF7Q05021 590 aa12.79□□□□□ -0.36
SDS24YBR214W SPO14P36126 1683 aa12.79□□□□□ -0.36
SDS24YBR214W BNI1P41832 1953 aa12.77□□□□□ -0.36
SDS24YBR214W MET10P39692 1035 aa12.73□□□□□ -0.37
SDS24YBR214W IRC20Q06554 1556 aa12.73□□□□□ -0.37
SDS24YBR214W IFH1P39520 1085 aa12.73□□□□□ -0.37
SDS24YBR214W PDR12Q02785 1511 aa12.71□□□□□ -0.37
SDS24YBR214W ITT1Q04638 464 aa12.68□□□□□ -0.38
SDS24YBR214W GDB1Q06625 1536 aa12.68□□□□□ -0.38
SDS24YBR214W GEA1P47102 1408 aaPredicted RBP12.67□□□□□ -0.38
SDS24YBR214W DRS2P39524 1355 aa12.66□□□□□ -0.38
SDS24YBR214W NUP170P38181 1502 aa12.66□□□□□ -0.38
SDS24YBR214W YBT1P32386 1661 aa12.63□□□□□ -0.39
SDS24YBR214W NUP157P40064 1391 aaKnown RBP12.62□□□□□ -0.39
SDS24YBR214W TY3B-GQ99315 1547 aa12.62□□□□□ -0.39
SDS24YBR214W PDR10P51533 1564 aa12.59□□□□□ -0.39
SDS24YBR214W IQG1Q12280 1495 aa12.55□□□□□ -0.4
SDS24YBR214W MMS1Q06211 1407 aa12.55□□□□□ -0.4
SDS24YBR214W CAT8P39113 1433 aa12.54□□□□□ -0.4
SDS24YBR214W DOP1Q03921 1698 aa12.53□□□□□ -0.4
SDS24YBR214W BUD3P25558 1636 aa12.51□□□□□ -0.41
SDS24YBR214W ARO1P08566 1588 aaKnown RBP12.48□□□□□ -0.41
SDS24YBR214W DNF2Q12675 1612 aa12.44□□□□□ -0.42
SDS24YBR214W TRM3Q07527 1436 aa12.44□□□□□ -0.42
SDS24YBR214W SEC7P11075 2009 aaKnown RBP12.42□□□□□ -0.42
SDS24YBR214W CKB1P43639 278 aa12.42□□□□□ -0.42
SDS24YBR214W CHC1P22137 1653 aaKnown RBP12.42□□□□□ -0.42
SDS24YBR214W YSP2Q06681 1438 aa12.36□□□□□ -0.43
SDS24YBR214W ABP1P15891 592 aaKnown RBP12.35□□□□□ -0.43
SDS24YBR214W IKI3Q06706 1349 aaKnown RBP12.31□□□□□ -0.44
SDS24YBR214W SRB8P25648 1427 aa12.31□□□□□ -0.44
SDS24YBR214W BNR1P40450 1375 aa12.28□□□□□ -0.44
SDS24YBR214W YOR093CQ12275 1648 aa12.23□□□□□ -0.45
SDS24YBR214W MIF2P35201 549 aa12.22□□□□□ -0.45
SDS24YBR214W SSM4P40318 1319 aa12.21□□□□□ -0.46
SDS24YBR214W BUD21Q08492 214 aaPredicted RBP12.18□□□□□ -0.46
SDS24YBR214W DNF3Q12674 1656 aa12.11□□□□□ -0.47
SDS24YBR214W NUP188P52593 1655 aaKnown RBP12.08□□□□□ -0.48
SDS24YBR214W YAP3P38749 330 aa12.05□□□□□ -0.48
SDS24YBR214W GCN2P15442 1659 aa12.05□□□□□ -0.48
SDS24YBR214W VMR1P38735 1592 aa12.04□□□□□ -0.48
SDS24YBR214W URN1Q06525 465 aaKnown RBP12.01□□□□□ -0.49
SDS24YBR214W IML1P47170 1584 aa11.95□□□□□ -0.5
SDS24YBR214W PDR5P33302 1511 aaKnown RBP11.95□□□□□ -0.5
SDS24YBR214W IPL1P38991 367 aa11.94□□□□□ -0.5
SDS24YBR214W TYS1P36421 394 aaKnown RBP11.92□□□□□ -0.5
SDS24YBR214W USO1P25386 1790 aa11.9□□□□□ -0.5
SDS24YBR214W MAK10Q02197 733 aa11.88□□□□□ -0.51
SDS24YBR214W PDR11P40550 1411 aa11.86□□□□□ -0.51
SDS24YBR214W YFR006WP43590 535 aa11.86□□□□□ -0.51
SDS24YBR214W HAP1P0CE41 1502 aa11.84□□□□□ -0.51
SDS24YBR214W PAF1P38351 445 aa11.79□□□□□ -0.52
SDS24YBR214W RAV1P47104 1357 aa11.75□□□□□ -0.53
SDS24YBR214W NOP7P53261 605 aaKnown RBP11.74□□□□□ -0.53
SDS24YBR214W TY1B-NL2Q99337 1749 aaKnown RBP11.73□□□□□ -0.53
SDS24YBR214W BFR2Q06631 534 aaKnown RBP11.72□□□□□ -0.53
SDS24YBR214W NUP192P47054 1683 aa11.7□□□□□ -0.54
SDS24YBR214W RTC1Q08281 1341 aa11.67□□□□□ -0.54
SDS24YBR214W BCK1Q01389 1478 aa11.63□□□□□ -0.55
SDS24YBR214W KRE5P22023 1365 aa11.63□□□□□ -0.55
SDS24YBR214W MRX12P47084 519 aa11.6□□□□□ -0.55
SDS24YBR214W YMR196WQ04336 1088 aa11.6□□□□□ -0.55
SDS24YBR214W RIA1P53893 1110 aa11.59□□□□□ -0.55
SDS24YBR214W RAD9P14737 1309 aa11.59□□□□□ -0.55
SDS24YBR214W THI12P42883 340 aa11.58□□□□□ -0.56
SDS24YBR214W THI5P43534 340 aa11.58□□□□□ -0.56
SDS24YBR214W THI11P47183 340 aa11.58□□□□□ -0.56
SDS24YBR214W THI13Q07748 340 aa11.58□□□□□ -0.56
SDS24YBR214W ALD4P46367 519 aaKnown RBP11.57□□□□□ -0.56
SDS24YBR214W CAB1Q04430 367 aa11.57□□□□□ -0.56
SDS24YBR214W CFT1Q06632 1357 aaKnown RBP11.57□□□□□ -0.56
SDS24YBR214W TAF5P38129 798 aa11.54□□□□□ -0.56
SDS24YBR214W ESL2P36168 1195 aa11.52□□□□□ -0.57
SDS24YBR214W YNR029CP53729 429 aaKnown RBP11.49□□□□□ -0.57
SDS24YBR214W TAF8Q03750 510 aa11.45□□□□□ -0.58
SDS24YBR214W NAP1P25293 417 aaKnown RBP11.43□□□□□ -0.58
SDS24YBR214W ORC1P54784 914 aaPredicted RBP11.42□□□□□ -0.58
SDS24YBR214W TY3B-IQ7LHG5 1498 aaKnown RBP11.42□□□□□ -0.58
SDS24YBR214W KIP3P53086 805 aaKnown RBP11.4□□□□□ -0.58
SDS24YBR214W SPE2P21182 396 aa11.37□□□□□ -0.59
SDS24YBR214W RCM1P53972 490 aa11.34□□□□□ -0.59
SDS24YBR214W YLR419WQ06698 1435 aaKnown RBP11.34□□□□□ -0.59
SDS24YBR214W TY4B-HP0C2J7 1802 aa11.31□□□□□ -0.6
SDS24YBR214W TY4B-JP47024 1803 aa11.31□□□□□ -0.6
SDS24YBR214W PPH3P32345 308 aa11.3□□□□□ -0.6
SDS24YBR214W CPS1P27614 576 aa11.29□□□□□ -0.6
SDS24YBR214W PTP3P40048 928 aa11.29□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms