RNA–Protein interactions for RNA: YBR127C

VMA2, Transcript of Subunit B of V1 peripheral membrane domain of vacuolar H+-ATPase, yeastyeast

Gene VMA2, Length 1,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA2YBR127C BYE1P36106 594 aa7.93□□□□□ -1.14
VMA2YBR127C SWE1P32944 819 aa7.91□□□□□ -1.14
VMA2YBR127C ETT1Q08421 412 aaKnown RBP7.91□□□□□ -1.14
VMA2YBR127C EDE1P34216 1381 aa7.9□□□□□ -1.14
VMA2YBR127C SPT6P23615 1451 aaKnown RBP7.9□□□□□ -1.14
VMA2YBR127C NOT3P06102 836 aaKnown RBP7.89□□□□□ -1.15
VMA2YBR127C MSH3P25336 1018 aa7.89□□□□□ -1.15
VMA2YBR127C TIF4632P39936 914 aaKnown RBP7.89□□□□□ -1.15
VMA2YBR127C RTT106P40161 455 aa7.89□□□□□ -1.15
VMA2YBR127C GRX3Q03835 250 aa7.89□□□□□ -1.15
VMA2YBR127C IRC20Q06554 1556 aa7.89□□□□□ -1.15
VMA2YBR127C ABP1P15891 592 aaKnown RBP7.88□□□□□ -1.15
VMA2YBR127C IFH1P39520 1085 aa7.88□□□□□ -1.15
VMA2YBR127C LEU3P08638 886 aa7.88□□□□□ -1.15
VMA2YBR127C MSH4P40965 878 aaPredicted RBP7.88□□□□□ -1.15
VMA2YBR127C PSD2P53037 1138 aaKnown RBP7.88□□□□□ -1.15
VMA2YBR127C BMS1Q08965 1183 aaKnown RBP7.88□□□□□ -1.15
VMA2YBR127C YPP1P46951 817 aa7.87□□□□□ -1.15
VMA2YBR127C RLP24Q07915 199 aaKnown RBP7.87□□□□□ -1.15
VMA2YBR127C MYO2P19524 1574 aaKnown RBP7.86□□□□□ -1.15
VMA2YBR127C MLP2P40457 1679 aa7.86□□□□□ -1.15
VMA2YBR127C RPN1P38764 993 aaKnown RBP7.86□□□□□ -1.15
VMA2YBR127C KNS1P32350 737 aaPredicted RBP7.85□□□□□ -1.15
VMA2YBR127C DJP1P40564 432 aa7.85□□□□□ -1.15
VMA2YBR127C MED8P38304 223 aa7.84□□□□□ -1.15
VMA2YBR127C PRP3Q03338 469 aaPredicted RBP7.84□□□□□ -1.15
VMA2YBR127C STU1P38198 1513 aa7.83□□□□□ -1.16
VMA2YBR127C TAF2P23255 1407 aa7.83□□□□□ -1.16
VMA2YBR127C CHZ1P40019 153 aaPredicted RBP7.83□□□□□ -1.16
VMA2YBR127C NNF2P53253 936 aa7.83□□□□□ -1.16
VMA2YBR127C ECM16Q04217 1267 aaKnown RBP7.82□□□□□ -1.16
VMA2YBR127C SRP54P20424 541 aaKnown RBP7.81□□□□□ -1.16
VMA2YBR127C CLB5P30283 435 aa7.81□□□□□ -1.16
VMA2YBR127C SMC4Q12267 1418 aa7.81□□□□□ -1.16
VMA2YBR127C PCT1P13259 424 aa7.8□□□□□ -1.16
VMA2YBR127C ECM1P39715 212 aa7.8□□□□□ -1.16
VMA2YBR127C DNA2P38859 1522 aa7.8□□□□□ -1.16
VMA2YBR127C MSP1P28737 362 aa7.8□□□□□ -1.16
VMA2YBR127C DSN1P40568 576 aa7.8□□□□□ -1.16
VMA2YBR127C TAN1P53072 289 aaPredicted RBP7.8□□□□□ -1.16
VMA2YBR127C DOS2P54858 310 aa7.8□□□□□ -1.16
VMA2YBR127C NOP8Q08287 484 aaPredicted RBP7.8□□□□□ -1.16
VMA2YBR127C RPN7Q06103 429 aaKnown RBP7.79□□□□□ -1.16
VMA2YBR127C REV3P14284 1504 aa7.78□□□□□ -1.16
VMA2YBR127C LTV1P34078 463 aa7.78□□□□□ -1.16
VMA2YBR127C SAP190P36123 1033 aa7.78□□□□□ -1.16
VMA2YBR127C SNU71P53207 620 aaKnown RBP7.76□□□□□ -1.17
VMA2YBR127C MDG1P53885 366 aa7.76□□□□□ -1.17
VMA2YBR127C NST1P53935 1240 aa7.76□□□□□ -1.17
VMA2YBR127C TY1B-DR4Q07793 1604 aa7.76□□□□□ -1.17
VMA2YBR127C SCC2Q04002 1493 aa7.76□□□□□ -1.17
VMA2YBR127C CIN4P39110 191 aa7.76□□□□□ -1.17
VMA2YBR127C TLG1Q03322 224 aa7.75□□□□□ -1.17
VMA2YBR127C YSH1Q06224 779 aaPredicted RBP7.75□□□□□ -1.17
VMA2YBR127C TRM3Q07527 1436 aa7.74□□□□□ -1.17
VMA2YBR127C VPS72Q03388 795 aa7.74□□□□□ -1.17
VMA2YBR127C VPS24P36095 224 aaKnown RBP7.73□□□□□ -1.17
VMA2YBR127C ARL1P38116 183 aaKnown RBP7.73□□□□□ -1.17
VMA2YBR127C NOP14Q99207 810 aaKnown RBP7.73□□□□□ -1.17
VMA2YBR127C RAD51P25454 400 aa7.72□□□□□ -1.17
VMA2YBR127C KIP3P53086 805 aaKnown RBP7.72□□□□□ -1.17
VMA2YBR127C RPS0AP32905 252 aaKnown RBP7.71□□□□□ -1.18
VMA2YBR127C RRP15Q06511 250 aaPredicted RBP7.71□□□□□ -1.18
VMA2YBR127C SIN3P22579 1536 aa7.7□□□□□ -1.18
VMA2YBR127C MHP1P43638 1398 aa7.7□□□□□ -1.18
VMA2YBR127C BPT1P14772 1559 aa7.7□□□□□ -1.18
VMA2YBR127C GEA1P47102 1408 aaPredicted RBP7.69□□□□□ -1.18
VMA2YBR127C SWI3P32591 825 aa7.69□□□□□ -1.18
VMA2YBR127C CBF5P33322 483 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
VMA2YBR127C RSC8P43609 557 aaKnown RBP7.69□□□□□ -1.18
VMA2YBR127C NHA1Q99271 985 aa7.69□□□□□ -1.18
VMA2YBR127C RAD2P07276 1031 aa7.68□□□□□ -1.18
VMA2YBR127C RSC1P53236 928 aa7.68□□□□□ -1.18
VMA2YBR127C VPS60Q03390 229 aa7.68□□□□□ -1.18
VMA2YBR127C APL5Q08951 932 aaKnown RBP7.68□□□□□ -1.18
VMA2YBR127C YOL087CQ99247 1116 aa7.68□□□□□ -1.18
VMA2YBR127C PAN1P32521 1480 aa7.68□□□□□ -1.18
VMA2YBR127C TPM2P40414 161 aa7.67□□□□□ -1.18
VMA2YBR127C ERV41Q04651 352 aa7.67□□□□□ -1.18
VMA2YBR127C GCN2P15442 1659 aa7.67□□□□□ -1.18
VMA2YBR127C RRP14P36080 434 aaKnown RBP7.67□□□□□ -1.18
VMA2YBR127C TEA1P47988 759 aa7.67□□□□□ -1.18
VMA2YBR127C LSP1Q12230 341 aaKnown RBP7.67□□□□□ -1.18
VMA2YBR127C POL1P13382 1468 aa7.66□□□□□ -1.18
VMA2YBR127C PET111P08468 800 aa7.66□□□□□ -1.18
VMA2YBR127C DEP1P31385 405 aa7.66□□□□□ -1.18
VMA2YBR127C PAP2P53632 584 aaKnown RBP7.66□□□□□ -1.18
VMA2YBR127C HIF1Q12373 385 aa7.66□□□□□ -1.18
VMA2YBR127C CLB1P24868 471 aa7.65□□□□□ -1.18
VMA2YBR127C SPT16P32558 1035 aaKnown RBP7.65□□□□□ -1.18
VMA2YBR127C ALD3P54114 506 aa7.65□□□□□ -1.18
VMA2YBR127C RIM101P33400 625 aa7.64□□□□□ -1.19
VMA2YBR127C TCD1P38756 429 aa7.64□□□□□ -1.19
VMA2YBR127C UBP10P53874 792 aaPredicted RBP7.64□□□□□ -1.19
VMA2YBR127C HSL1P34244 1518 aa7.64□□□□□ -1.19
VMA2YBR127C YCF1P39109 1515 aaKnown RBP7.64□□□□□ -1.19
VMA2YBR127C NUP157P40064 1391 aaKnown RBP7.63□□□□□ -1.19
VMA2YBR127C PEA2P40091 420 aa7.63□□□□□ -1.19
VMA2YBR127C ORM2Q06144 216 aa7.63□□□□□ -1.19
VMA2YBR127C TY1B-AO13527 1196 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms