RNA–Protein interactions for RNA: YBR005W

RCR1, Transcript of Protein of the ER membrane involved in cell wall chitin deposition, yeastyeast

Gene RCR1, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCR1YBR005W TY1B-LR1Q12088 1755 aaKnown RBP13.4□□□□□ -0.26
RCR1YBR005W TY1B-NL1Q12112 1755 aa13.4□□□□□ -0.26
RCR1YBR005W TY1B-GR1Q12141 1755 aa13.4□□□□□ -0.26
RCR1YBR005W TY1B-BLQ12490 1755 aa13.4□□□□□ -0.26
RCR1YBR005W TSC11P40061 1430 aa13.39□□□□□ -0.27
RCR1YBR005W NTE1Q04958 1679 aa13.37□□□□□ -0.27
RCR1YBR005W YFR006WP43590 535 aa13.37□□□□□ -0.27
RCR1YBR005W VTH1P40438 1549 aa13.34□□□□□ -0.27
RCR1YBR005W VTH2P40890 1549 aa13.34□□□□□ -0.27
RCR1YBR005W RPO21P04050 1733 aaKnown RBP13.33□□□□□ -0.27
RCR1YBR005W MYO4P32492 1471 aa13.3□□□□□ -0.28
RCR1YBR005W MET10P39692 1035 aa13.24□□□□□ -0.29
RCR1YBR005W YTA7P40340 1379 aa13.23□□□□□ -0.29
RCR1YBR005W IRC20Q06554 1556 aa13.23□□□□□ -0.29
RCR1YBR005W STH1P32597 1359 aa13.21□□□□□ -0.29
RCR1YBR005W NUP170P38181 1502 aa13.21□□□□□ -0.29
RCR1YBR005W SNT2P53127 1403 aa13.21□□□□□ -0.3
RCR1YBR005W DNF2Q12675 1612 aa13.17□□□□□ -0.3
RCR1YBR005W RTT106P40161 455 aa13.15□□□□□ -0.3
RCR1YBR005W SNQ2P32568 1501 aaKnown RBP13.13□□□□□ -0.31
RCR1YBR005W ULS1Q08562 1619 aa13.1□□□□□ -0.31
RCR1YBR005W SPO14P36126 1683 aa13.09□□□□□ -0.31
RCR1YBR005W PDR12Q02785 1511 aa13.03□□□□□ -0.32
RCR1YBR005W TRM3Q07527 1436 aa13.02□□□□□ -0.33
RCR1YBR005W MLP2P40457 1679 aa12.99□□□□□ -0.33
RCR1YBR005W DOP1Q03921 1698 aa12.99□□□□□ -0.33
RCR1YBR005W BUD3P25558 1636 aa12.99□□□□□ -0.33
RCR1YBR005W IQG1Q12280 1495 aa12.97□□□□□ -0.33
RCR1YBR005W PDR10P51533 1564 aa12.96□□□□□ -0.33
RCR1YBR005W YOR093CQ12275 1648 aa12.92□□□□□ -0.34
RCR1YBR005W GDB1Q06625 1536 aa12.91□□□□□ -0.34
RCR1YBR005W NUP157P40064 1391 aaKnown RBP12.91□□□□□ -0.34
RCR1YBR005W TAF7Q05021 590 aa12.89□□□□□ -0.35
RCR1YBR005W SEC7P11075 2009 aaKnown RBP12.78□□□□□ -0.36
RCR1YBR005W SAS10Q12136 610 aaPredicted RBP12.76□□□□□ -0.37
RCR1YBR005W PDR15Q04182 1529 aaKnown RBP12.76□□□□□ -0.37
RCR1YBR005W CHC1P22137 1653 aaKnown RBP12.73□□□□□ -0.37
RCR1YBR005W YAP3P38749 330 aa12.68□□□□□ -0.38
RCR1YBR005W ARO1P08566 1588 aaKnown RBP12.68□□□□□ -0.38
RCR1YBR005W CAT8P39113 1433 aa12.66□□□□□ -0.38
RCR1YBR005W IFH1P39520 1085 aa12.66□□□□□ -0.38
RCR1YBR005W DNF3Q12674 1656 aa12.65□□□□□ -0.38
RCR1YBR005W URN1Q06525 465 aaKnown RBP12.64□□□□□ -0.39
RCR1YBR005W BNR1P40450 1375 aa12.56□□□□□ -0.4
RCR1YBR005W CKB1P43639 278 aa12.55□□□□□ -0.4
RCR1YBR005W MAK10Q02197 733 aa12.55□□□□□ -0.4
RCR1YBR005W GEA1P47102 1408 aaPredicted RBP12.53□□□□□ -0.4
RCR1YBR005W TY3B-GQ99315 1547 aa12.52□□□□□ -0.4
RCR1YBR005W YBT1P32386 1661 aa12.48□□□□□ -0.41
RCR1YBR005W YSP2Q06681 1438 aa12.47□□□□□ -0.41
RCR1YBR005W USO1P25386 1790 aa12.39□□□□□ -0.43
RCR1YBR005W YMR196WQ04336 1088 aa12.38□□□□□ -0.43
RCR1YBR005W HAP1P0CE41 1502 aa12.32□□□□□ -0.44
RCR1YBR005W SRB8P25648 1427 aa12.31□□□□□ -0.44
RCR1YBR005W TY1B-NL2Q99337 1749 aaKnown RBP12.31□□□□□ -0.44
RCR1YBR005W IPL1P38991 367 aa12.3□□□□□ -0.44
RCR1YBR005W BUD21Q08492 214 aaPredicted RBP12.26□□□□□ -0.45
RCR1YBR005W THI12P42883 340 aa12.21□□□□□ -0.45
RCR1YBR005W THI5P43534 340 aa12.21□□□□□ -0.45
RCR1YBR005W THI11P47183 340 aa12.21□□□□□ -0.45
RCR1YBR005W THI13Q07748 340 aa12.21□□□□□ -0.45
RCR1YBR005W NUP188P52593 1655 aaKnown RBP12.19□□□□□ -0.46
RCR1YBR005W IML1P47170 1584 aa12.18□□□□□ -0.46
RCR1YBR005W TYS1P36421 394 aaKnown RBP12.12□□□□□ -0.47
RCR1YBR005W VMR1P38735 1592 aa12.12□□□□□ -0.47
RCR1YBR005W YAH1Q12184 172 aaKnown RBP12.06□□□□□ -0.48
RCR1YBR005W PDR5P33302 1511 aaKnown RBP11.96□□□□□ -0.5
RCR1YBR005W MRX12P47084 519 aa11.95□□□□□ -0.5
RCR1YBR005W GLN1P32288 370 aaKnown RBP11.94□□□□□ -0.5
RCR1YBR005W YIL055CP40523 627 aaKnown RBP11.91□□□□□ -0.5
RCR1YBR005W PTP3P40048 928 aa11.87□□□□□ -0.51
RCR1YBR005W RIA1P53893 1110 aa11.87□□□□□ -0.51
RCR1YBR005W IKI3Q06706 1349 aaKnown RBP11.86□□□□□ -0.51
RCR1YBR005W CFT1Q06632 1357 aaKnown RBP11.85□□□□□ -0.51
RCR1YBR005W PRI1P10363 409 aa11.83□□□□□ -0.52
RCR1YBR005W APP1P53933 587 aa11.83□□□□□ -0.52
RCR1YBR005W KRE5P22023 1365 aa11.82□□□□□ -0.52
RCR1YBR005W YNR029CP53729 429 aaKnown RBP11.82□□□□□ -0.52
RCR1YBR005W GCN2P15442 1659 aa11.81□□□□□ -0.52
RCR1YBR005W PAF1P38351 445 aa11.79□□□□□ -0.52
RCR1YBR005W PDR11P40550 1411 aa11.78□□□□□ -0.52
RCR1YBR005W BCK1Q01389 1478 aa11.77□□□□□ -0.52
RCR1YBR005W YMR074CQ04773 145 aa11.75□□□□□ -0.53
RCR1YBR005W ENT1Q12518 454 aa11.71□□□□□ -0.53
RCR1YBR005W REB1P21538 810 aa11.7□□□□□ -0.54
RCR1YBR005W NAP1P25293 417 aaKnown RBP11.68□□□□□ -0.54
RCR1YBR005W ALD4P46367 519 aaKnown RBP11.68□□□□□ -0.54
RCR1YBR005W CAB1Q04430 367 aa11.67□□□□□ -0.54
RCR1YBR005W NUP192P47054 1683 aa11.67□□□□□ -0.54
RCR1YBR005W RAV1P47104 1357 aa11.67□□□□□ -0.54
RCR1YBR005W SSM4P40318 1319 aa11.66□□□□□ -0.54
RCR1YBR005W ENV9Q08651 330 aa11.66□□□□□ -0.54
RCR1YBR005W IMH1Q06704 911 aaKnown RBP11.65□□□□□ -0.54
RCR1YBR005W BFR2Q06631 534 aaKnown RBP11.63□□□□□ -0.55
RCR1YBR005W RTC1Q08281 1341 aa11.6□□□□□ -0.55
RCR1YBR005W RAD9P14737 1309 aa11.59□□□□□ -0.55
RCR1YBR005W YRF1-2P40105 1681 aa11.59□□□□□ -0.55
RCR1YBR005W RRP5Q05022 1729 aaKnown RBP11.55□□□□□ -0.56
RCR1YBR005W UBP1P25037 809 aa11.55□□□□□ -0.56
RCR1YBR005W TAF5P38129 798 aa11.55□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms