RNA–Protein interactions for RNA: ENST00000641834.1

C19orf48-216, Transcript of chromosome 19 open reading frame 48, humanhuman

Gene C19orf48, Length 1,718 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-216ENST00000641834 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
C19orf48-216ENST00000641834 LRRC9Q6ZRR7 1453 aa26.06■■□□□ 1.76
C19orf48-216ENST00000641834 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
C19orf48-216ENST00000641834 PCF11O94913 1555 aaKnown RBP26.05■■□□□ 1.76
C19orf48-216ENST00000641834 NEUROD1Q13562 356 aa26.04■■□□□ 1.76
C19orf48-216ENST00000641834 NESP48681 1621 aa26.04■■□□□ 1.76
C19orf48-216ENST00000641834 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.75not detected■■■■□ 23.4
C19orf48-216ENST00000641834 CENPBP07199 599 aaPredicted RBP25.99■■□□□ 1.75
C19orf48-216ENST00000641834 ABCA5Q8WWZ7 1642 aa25.98■■□□□ 1.75
C19orf48-216ENST00000641834 URB2Q14146 1524 aaKnown RBP25.97■■□□□ 1.75
C19orf48-216ENST00000641834 FYCO1Q9BQS8 1478 aa25.97■■□□□ 1.75
C19orf48-216ENST00000641834 CASKIN1Q8WXD9 1431 aa25.9■■□□□ 1.74
C19orf48-216ENST00000641834 PHLDB1Q86UU1 1377 aa25.88■■□□□ 1.73
C19orf48-216ENST00000641834 SAMD9Q5K651 1589 aa25.86■■□□□ 1.73
C19orf48-216ENST00000641834 MAPKBP1O60336 1514 aa25.86■■□□□ 1.73
C19orf48-216ENST00000641834 FHOD3Q2V2M9 1422 aa25.84■■□□□ 1.73
C19orf48-216ENST00000641834 RAB3GAP2Q9H2M9 1393 aa25.82■■□□□ 1.72
C19orf48-216ENST00000641834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.82■■□□□ 1.72
C19orf48-216ENST00000641834 MIER1Q8N108 512 aa25.82■■□□□ 1.72
C19orf48-216ENST00000641834 SNAPC4Q5SXM2 1469 aa25.81■■□□□ 1.72
C19orf48-216ENST00000641834 SETD5Q9C0A6 1442 aa25.79■■□□□ 1.72
C19orf48-216ENST00000641834 PDS5BQ9NTI5 1447 aa25.79■■□□□ 1.72
C19orf48-216ENST00000641834 KIF21AQ7Z4S6 1674 aa25.79■■□□□ 1.72
C19orf48-216ENST00000641834 FMN1Q68DA7 1419 aa25.77■■□□□ 1.72
C19orf48-216ENST00000641834 TARBP1Q13395 1621 aaKnown RBP25.75■■□□□ 1.71
C19orf48-216ENST00000641834 GAPVD1Q14C86 1478 aa25.75■■□□□ 1.71
C19orf48-216ENST00000641834 THOC2Q8NI27 1593 aaKnown RBP25.75■■□□□ 1.71
C19orf48-216ENST00000641834 PELP1Q8IZL8 1130 aaKnown RBP25.74■■□□□ 1.71
C19orf48-216ENST00000641834 LRRIQ1Q96JM4 1722 aa25.73■■□□□ 1.71
C19orf48-216ENST00000641834 GTF3C3Q9Y5Q9 886 aa25.71■■□□□ 1.71
C19orf48-216ENST00000641834 GRIN2BQ13224 1484 aa25.67■■□□□ 1.7
C19orf48-216ENST00000641834 P3H3Q8IVL6 736 aa25.66■■□□□ 1.7
C19orf48-216ENST00000641834 PBRM1Q86U86 1689 aa25.63■■□□□ 1.69
C19orf48-216ENST00000641834 TDRD9Q8NDG6 1382 aaKnown RBP25.63■■□□□ 1.69
C19orf48-216ENST00000641834 ITGAEP38570 1179 aa25.62■■□□□ 1.69
C19orf48-216ENST00000641834 FGD6Q6ZV73 1430 aa25.61■■□□□ 1.69
C19orf48-216ENST00000641834 ARHGEF11O15085 1522 aa25.55■■□□□ 1.68
C19orf48-216ENST00000641834 EHBP1L1Q8N3D4 1523 aa25.55■■□□□ 1.68
C19orf48-216ENST00000641834 SUPT6HQ7KZ85 1726 aaKnown RBP25.55■■□□□ 1.68
C19orf48-216ENST00000641834 ADAMTS12P58397 1594 aa25.53■■□□□ 1.68
C19orf48-216ENST00000641834 FAM50AQ14320 339 aaKnown RBP25.53■■□□□ 1.68
C19orf48-216ENST00000641834 TIMELESSQ9UNS1 1208 aa25.51■■□□□ 1.67
C19orf48-216ENST00000641834 YTHDC1Q96MU7 727 aaKnown RBP25.49■■□□□ 1.67
C19orf48-216ENST00000641834 DNAJC5BQ9UF47 199 aa25.49■■□□□ 1.67
C19orf48-216ENST00000641834 NCOA2Q15596 1464 aa25.49■■□□□ 1.67
C19orf48-216ENST00000641834 UGGT2Q9NYU1 1516 aa25.48■■□□□ 1.67
C19orf48-216ENST00000641834 MYOM3Q5VTT5 1437 aa25.47■■□□□ 1.67
C19orf48-216ENST00000641834 CCDC18Q5T9S5 1454 aa25.47■■□□□ 1.67
C19orf48-216ENST00000641834 PTPN23Q9H3S7 1636 aa25.47■■□□□ 1.67
C19orf48-216ENST00000641834 MTUS2Q5JR59 1369 aa25.47■■□□□ 1.67
C19orf48-216ENST00000641834 HFM1A2PYH4 1435 aa25.47■■□□□ 1.67
C19orf48-216ENST00000641834 IQGAP2Q13576 1575 aa25.46■■□□□ 1.67
C19orf48-216ENST00000641834 MRC2Q9UBG0 1479 aa25.45■■□□□ 1.67
C19orf48-216ENST00000641834 HECW1Q76N89 1606 aa25.44■■□□□ 1.66
C19orf48-216ENST00000641834 ATP1B4Q9UN42 357 aaPredicted RBP25.44■■□□□ 1.66
C19orf48-216ENST00000641834 MAGI3Q5TCQ9 1506 aa25.43■■□□□ 1.66
C19orf48-216ENST00000641834 PTPRKQ15262 1439 aa25.43■■□□□ 1.66
C19orf48-216ENST00000641834 TCOF1Q13428 1488 aaKnown RBP25.4■■□□□ 1.66
C19orf48-216ENST00000641834 UACAQ9BZF9 1416 aa25.38■■□□□ 1.65
C19orf48-216ENST00000641834 WDR62O43379 1518 aa25.36■■□□□ 1.65
C19orf48-216ENST00000641834 GCC2Q8IWJ2 1684 aa25.35■■□□□ 1.65
C19orf48-216ENST00000641834 NAIPQ13075 1403 aa25.35■■□□□ 1.65
C19orf48-216ENST00000641834 SIN3AQ96ST3 1273 aa25.34■■□□□ 1.65
C19orf48-216ENST00000641834 AKNAQ7Z591 1439 aa25.31■■□□□ 1.64
C19orf48-216ENST00000641834 IFT140Q96RY7 1462 aa25.31■■□□□ 1.64
C19orf48-216ENST00000641834 EPRSP07814 1512 aaKnown RBP25.31■■□□□ 1.64
C19orf48-216ENST00000641834 PPP1R15AO75807 674 aaPredicted RBP25.27■■□□□ 1.64
C19orf48-216ENST00000641834 MIA2Q96PC5 1412 aa25.24■■□□□ 1.63
C19orf48-216ENST00000641834 KDM5BQ9UGL1 1544 aa25.23■■□□□ 1.63
C19orf48-216ENST00000641834 KIAA0556O60303 1618 aa25.22■■□□□ 1.63
C19orf48-216ENST00000641834 KIAA0586Q9BVV6 1533 aa25.2■■□□□ 1.62
C19orf48-216ENST00000641834 CDK13Q14004 1512 aaKnown RBP25.19■■□□□ 1.62
C19orf48-216ENST00000641834 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
C19orf48-216ENST00000641834 DISP1Q96F81 1524 aa25.18■■□□□ 1.62
C19orf48-216ENST00000641834 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
C19orf48-216ENST00000641834 DENND4BO75064 1496 aaPredicted RBP25.14■■□□□ 1.62
C19orf48-216ENST00000641834 TONSLQ96HA7 1378 aa25.11■■□□□ 1.61
C19orf48-216ENST00000641834 GRIN2AQ12879 1464 aa25.11■■□□□ 1.61
C19orf48-216ENST00000641834 KDM6BO15054 1643 aa25.1■■□□□ 1.61
C19orf48-216ENST00000641834 RAPGEF6Q8TEU7 1601 aa25.1■■□□□ 1.61
C19orf48-216ENST00000641834 NUP153P49790 1475 aaKnown RBP25.07■■□□□ 1.6
C19orf48-216ENST00000641834 DNMT1P26358 1616 aaKnown RBP25.07■■□□□ 1.6
C19orf48-216ENST00000641834 MAGI1Q96QZ7 1491 aaPredicted RBP25.04■■□□□ 1.6
C19orf48-216ENST00000641834 ROCK1Q13464 1354 aa25.03■■□□□ 1.6
C19orf48-216ENST00000641834 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
C19orf48-216ENST00000641834 ADCY10Q96PN6 1610 aa24.99■■□□□ 1.59
C19orf48-216ENST00000641834 DAPK1P53355 1430 aa24.98■■□□□ 1.59
C19orf48-216ENST00000641834 KCNH8Q96L42 1107 aa24.98■■□□□ 1.59
C19orf48-216ENST00000641834 CEP170Q5SW79 1584 aa24.97■■□□□ 1.59
C19orf48-216ENST00000641834 CCER2I3L3R5 266 aa24.97■■□□□ 1.59
C19orf48-216ENST00000641834 ITSN2Q9NZM3 1697 aa24.94■■□□□ 1.58
C19orf48-216ENST00000641834 ABCC5O15440 1437 aa24.94■■□□□ 1.58
C19orf48-216ENST00000641834 RRP7BPQ9NSQ0 103 aa24.94■■□□□ 1.58
C19orf48-216ENST00000641834 SYNJ2O15056 1496 aa24.94■■□□□ 1.58
C19orf48-216ENST00000641834 SUPT16HQ9Y5B9 1047 aaKnown RBP24.93■■□□□ 1.58
C19orf48-216ENST00000641834 ADGBQ8N7X0 1667 aa24.9■■□□□ 1.58
C19orf48-216ENST00000641834 TROQ12816 1431 aaPredicted RBP24.89■■□□□ 1.58
C19orf48-216ENST00000641834 NUP160Q12769 1436 aa24.89■■□□□ 1.57
C19orf48-216ENST00000641834 CROCC2H7BZ55 1655 aa24.88■■□□□ 1.57
C19orf48-216ENST00000641834 CHIC2Q9UKJ5 165 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms