RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 PRKCSHP14314 528 aaPredicted RBP10.53□□□□□ -0.72
CASC19-243ENST00000641588 RBM42Q9BTD8 480 aaKnown RBP10.53□□□□□ -0.72
CASC19-243ENST00000641588 SUPT5HO00267 1087 aaKnown RBP10.53□□□□□ -0.72
CASC19-243ENST00000641588 RGL2O15211 777 aa10.53□□□□□ -0.72
CASC19-243ENST00000641588 ANP32EQ9BTT0 268 aa10.53□□□□□ -0.72
CASC19-243ENST00000641588 CIZ1Q9ULV3 898 aaPredicted RBP10.53□□□□□ -0.72
CASC19-243ENST00000641588 AKT1S1Q96B36 256 aa10.52□□□□□ -0.73
CASC19-243ENST00000641588 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
CASC19-243ENST00000641588 NPM1P06748 294 aaKnown RBP eCLIP10.49□□□□□ -0.73
CASC19-243ENST00000641588 HAP1P54257 671 aaPredicted RBP10.49□□□□□ -0.73
CASC19-243ENST00000641588 FAM9AQ8IZU1 332 aaPredicted RBP10.48□□□□□ -0.73
CASC19-243ENST00000641588 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
CASC19-243ENST00000641588 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
CASC19-243ENST00000641588 REM2Q8IYK8 340 aaPredicted RBP10.44□□□□□ -0.74
CASC19-243ENST00000641588 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
CASC19-243ENST00000641588 DIEXFQ68CQ4 756 aaKnown RBP10.42□□□□□ -0.74
CASC19-243ENST00000641588 PRR29P0C7W0 189 aa10.41□□□□□ -0.74
CASC19-243ENST00000641588 NUBP1P53384 320 aa10.41□□□□□ -0.74
CASC19-243ENST00000641588 TRIM41Q8WV44 630 aa10.4□□□□□ -0.74
CASC19-243ENST00000641588 CREBZFQ9NS37 354 aa10.4□□□□□ -0.74
CASC19-243ENST00000641588 GSE1Q14687 1217 aa10.38□□□□□ -0.75
CASC19-243ENST00000641588 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
CASC19-243ENST00000641588 CHGAP10645 457 aaKnown RBP10.36□□□□□ -0.75
CASC19-243ENST00000641588 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
CASC19-243ENST00000641588 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
CASC19-243ENST00000641588 DCAF8Q5TAQ9 597 aa10.34□□□□□ -0.75
CASC19-243ENST00000641588 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
CASC19-243ENST00000641588 RNF25Q96BH1 459 aaPredicted RBP10.33□□□□□ -0.76
CASC19-243ENST00000641588 PITPNM1O00562 1244 aa10.32□□□□□ -0.76
CASC19-243ENST00000641588 SPRYD3Q8NCJ5 442 aa10.3□□□□□ -0.76
CASC19-243ENST00000641588 FAM212AQ96EL1 285 aa10.29□□□□□ -0.76
CASC19-243ENST00000641588 MYT1LQ9UL68 1186 aa10.29□□□□□ -0.76
CASC19-243ENST00000641588 SHROOM4Q9ULL8 1493 aa10.29□□□□□ -0.76
CASC19-243ENST00000641588 LOC105371045A0A1W2PR82 267 aa10.28□□□□□ -0.76
CASC19-243ENST00000641588 HS6ST3Q8IZP7 471 aa10.28□□□□□ -0.76
CASC19-243ENST00000641588 RASEFQ8IZ41 740 aa10.27□□□□□ -0.77
CASC19-243ENST00000641588 KDM2AQ9Y2K7 1162 aa10.26□□□□□ -0.77
CASC19-243ENST00000641588 RIOK3O14730 519 aaKnown RBP10.24□□□□□ -0.77
CASC19-243ENST00000641588 TSHZ2Q9NRE2 1034 aa10.23□□□□□ -0.77
CASC19-243ENST00000641588 ZNF316A6NFI3 1004 aaPredicted RBP10.21□□□□□ -0.78
CASC19-243ENST00000641588 CHRM1P11229 460 aaPredicted RBP10.21□□□□□ -0.78
CASC19-243ENST00000641588 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
CASC19-243ENST00000641588 TAOK2Q9UL54 1235 aa10.19□□□□□ -0.78
CASC19-243ENST00000641588 CCER1Q8TC90 406 aaPredicted RBP10.18□□□□□ -0.78
CASC19-243ENST00000641588 BCANQ96GW7 911 aa10.18□□□□□ -0.78
CASC19-243ENST00000641588 CHADLQ6NUI6 762 aa10.17□□□□□ -0.78
CASC19-243ENST00000641588 VGFO15240 615 aaPredicted RBP10.17□□□□□ -0.78
CASC19-243ENST00000641588 PYGBP11216 843 aa10.16□□□□□ -0.78
CASC19-243ENST00000641588 NKX1-1Q15270 411 aaPredicted RBP10.15□□□□□ -0.78
CASC19-243ENST00000641588 STK25O00506 426 aa10.14□□□□□ -0.79
CASC19-243ENST00000641588 SUPT16HQ9Y5B9 1047 aaKnown RBP10.12□□□□□ -0.79
CASC19-243ENST00000641588 ZCCHC6Q5VYS8 1495 aaKnown RBP10.11□□□□□ -0.79
CASC19-243ENST00000641588 SGIP1Q9BQI5 828 aa10.11□□□□□ -0.79
CASC19-243ENST00000641588 FARP1Q9Y4F1 1045 aaPredicted RBP10.11□□□□□ -0.79
CASC19-243ENST00000641588 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.1□□□□□ -0.79
CASC19-243ENST00000641588 ZFP91Q96JP5 570 aaPredicted RBP10.1□□□□□ -0.79
CASC19-243ENST00000641588 GTPBP6O43824 516 aaPredicted RBP10.09□□□□□ -0.79
CASC19-243ENST00000641588 ERICH6BQ5W0A0 696 aa10.09□□□□□ -0.79
CASC19-243ENST00000641588 TSPYL2Q9H2G4 693 aaPredicted RBP10.09□□□□□ -0.79
CASC19-243ENST00000641588 BCL11BQ9C0K0 894 aaPredicted RBP10.07□□□□□ -0.8
CASC19-243ENST00000641588 STK24Q9Y6E0 443 aa10.07□□□□□ -0.8
CASC19-243ENST00000641588 PRKAR2AP13861 404 aaKnown RBP10.06□□□□□ -0.8
CASC19-243ENST00000641588 FXR2P51116 673 aaKnown RBP eCLIP10.02□□□□□ -0.8
CASC19-243ENST00000641588 YTHDC1Q96MU7 727 aaKnown RBP10.02□□□□□ -0.8
CASC19-243ENST00000641588 CHRDL2Q6WN34 429 aa10□□□□□ -0.81
CASC19-243ENST00000641588 ZNF467Q7Z7K2 595 aaPredicted RBP10□□□□□ -0.81
CASC19-243ENST00000641588 UBE2Q2Q8WVN8 375 aa9.98□□□□□ -0.81
CASC19-243ENST00000641588 CCDC61Q9Y6R9 512 aa9.98□□□□□ -0.81
CASC19-243ENST00000641588 PCDHB8Q9UN66 801 aa9.97□□□□□ -0.81
CASC19-243ENST00000641588 PCDHB13Q9Y5F0 798 aa9.97□□□□□ -0.81
CASC19-243ENST00000641588 FANCIQ9NVI1 1328 aa9.96□□□□□ -0.82
CASC19-243ENST00000641588 PDAP1Q13442 181 aaKnown RBP9.96□□□□□ -0.82
CASC19-243ENST00000641588 RYDENQ9NUL5 291 aaKnown RBP9.96□□□□□ -0.82
CASC19-243ENST00000641588 PIP4P2Q8N4L2 257 aa9.93□□□□□ -0.82
CASC19-243ENST00000641588 RBM19Q9Y4C8 960 aaKnown RBP9.93□□□□□ -0.82
CASC19-243ENST00000641588 ZNF579Q8NAF0 562 aaKnown RBP9.92□□□□□ -0.82
CASC19-243ENST00000641588 PSEN1P49768 467 aa9.91□□□□□ -0.82
CASC19-243ENST00000641588 WRNQ14191 1432 aaPredicted RBP eCLIP9.9□□□□□ -0.82
CASC19-243ENST00000641588 PAK3O75914 559 aaPredicted RBP9.9□□□□□ -0.82
CASC19-243ENST00000641588 TPRNQ4KMQ1 711 aa9.88□□□□□ -0.83
CASC19-243ENST00000641588 NBR1Q14596 966 aa9.87□□□□□ -0.83
CASC19-243ENST00000641588 LHX8Q68G74 356 aa9.87□□□□□ -0.83
CASC19-243ENST00000641588 IFNL1Q8IU54 200 aa9.87□□□□□ -0.83
CASC19-243ENST00000641588 MAP3K13O43283 966 aa9.87□□□□□ -0.83
CASC19-243ENST00000641588 KIF12Q96FN5 646 aa9.87□□□□□ -0.83
CASC19-243ENST00000641588 DEKP35659 375 aaKnown RBP9.83□□□□□ -0.84
CASC19-243ENST00000641588 MFRPQ9BY79 579 aa9.83□□□□□ -0.84
CASC19-243ENST00000641588 ANO8Q9HCE9 1232 aaPredicted RBP9.83□□□□□ -0.84
CASC19-243ENST00000641588 NEFLP07196 543 aa9.82□□□□□ -0.84
CASC19-243ENST00000641588 CADPS2Q86UW7 1296 aa9.81□□□□□ -0.84
CASC19-243ENST00000641588 DAXXQ9UER7 740 aaPredicted RBP9.81□□□□□ -0.84
CASC19-243ENST00000641588 ZRANB1Q9UGI0 708 aa9.81□□□□□ -0.84
CASC19-243ENST00000641588 EIF5BO60841 1220 aaKnown RBP9.8□□□□□ -0.84
CASC19-243ENST00000641588 CD44P16070 742 aaKnown RBP9.79□□□□□ -0.84
CASC19-243ENST00000641588 EFCAB3Q8N7B9 438 aa9.78□□□□□ -0.84
CASC19-243ENST00000641588 CABP2Q9NPB3 220 aa9.78□□□□□ -0.84
CASC19-243ENST00000641588 PHF12Q96QT6 1004 aa9.77□□□□□ -0.84
CASC19-243ENST00000641588 PPP1R37O75864 691 aa9.75□□□□□ -0.85
CASC19-243ENST00000641588 FBXO22Q8NEZ5 403 aa9.75□□□□□ -0.85
CASC19-243ENST00000641588 SOX12O15370 315 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms