RNA–Protein interactions for RNA: ENST00000640605.1

KCNMA1-285, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-285ENST00000640605 ANP32CO43423 234 aa18.09■□□□□ 0.49
KCNMA1-285ENST00000640605 IL27Q8NEV9 243 aa18.09■□□□□ 0.49
KCNMA1-285ENST00000640605 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.49
KCNMA1-285ENST00000640605 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.48
KCNMA1-285ENST00000640605 ZNF777Q9ULD5 760 aaPredicted RBP18.07■□□□□ 0.48
KCNMA1-285ENST00000640605 RTN4Q9NQC3 1192 aaKnown RBP18.04■□□□□ 0.48
KCNMA1-285ENST00000640605 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.04■□□□□ 0.48
KCNMA1-285ENST00000640605 PPP4R2Q9NY27 417 aa18.03■□□□□ 0.48
KCNMA1-285ENST00000640605 RTL5Q5HYW3 569 aaPredicted RBP18.02■□□□□ 0.48
KCNMA1-285ENST00000640605 KIF21BO75037 1637 aa18■□□□□ 0.47
KCNMA1-285ENST00000640605 CUX2O14529 1486 aa18■□□□□ 0.47
KCNMA1-285ENST00000640605 BAZ1BQ9UIG0 1483 aaKnown RBP17.99■□□□□ 0.47
KCNMA1-285ENST00000640605 HNRNPUQ00839 825 aaKnown RBP eCLIP17.98■□□□□ 0.47
KCNMA1-285ENST00000640605 WDR97A6NE52 1622 aa17.97■□□□□ 0.47
KCNMA1-285ENST00000640605 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
KCNMA1-285ENST00000640605 MAPKBP1O60336 1514 aa17.95■□□□□ 0.46
KCNMA1-285ENST00000640605 RRBP1Q9P2E9 1410 aaKnown RBP17.94■□□□□ 0.46
KCNMA1-285ENST00000640605 SENP3-EIF4A1A0A087X0R7 540 aa17.93■□□□□ 0.46
KCNMA1-285ENST00000640605 B4GALNT3Q6L9W6 998 aa17.93■□□□□ 0.46
KCNMA1-285ENST00000640605 TOP2AP11388 1531 aaKnown RBP17.93■□□□□ 0.46
KCNMA1-285ENST00000640605 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
KCNMA1-285ENST00000640605 SMARCA2P51531 1590 aa17.9■□□□□ 0.46
KCNMA1-285ENST00000640605 RRP7BPQ9NSQ0 103 aa17.89■□□□□ 0.45
KCNMA1-285ENST00000640605 IPO9Q96P70 1041 aaKnown RBP17.89■□□□□ 0.45
KCNMA1-285ENST00000640605 RAB3GAP2Q9H2M9 1393 aa17.89■□□□□ 0.45
KCNMA1-285ENST00000640605 RAPGEF2Q9Y4G8 1499 aa17.88■□□□□ 0.45
KCNMA1-285ENST00000640605 ANP32AP39687 249 aaKnown RBP17.87■□□□□ 0.45
KCNMA1-285ENST00000640605 CCNB3Q8WWL7 1395 aa17.86■□□□□ 0.45
KCNMA1-285ENST00000640605 ZBTB47Q9UFB7 747 aaPredicted RBP17.86■□□□□ 0.45
KCNMA1-285ENST00000640605 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
KCNMA1-285ENST00000640605 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
KCNMA1-285ENST00000640605 TONSLQ96HA7 1378 aa17.8■□□□□ 0.44
KCNMA1-285ENST00000640605 TIMELESSQ9UNS1 1208 aa17.79■□□□□ 0.44
KCNMA1-285ENST00000640605 MTUS2Q5JR59 1369 aa17.78■□□□□ 0.44
KCNMA1-285ENST00000640605 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.44
KCNMA1-285ENST00000640605 C11orf95C9JLR9 678 aaPredicted RBP17.76■□□□□ 0.43
KCNMA1-285ENST00000640605 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
KCNMA1-285ENST00000640605 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
KCNMA1-285ENST00000640605 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
KCNMA1-285ENST00000640605 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
KCNMA1-285ENST00000640605 WASHC2CQ9Y4E1 1318 aa17.71■□□□□ 0.43
KCNMA1-285ENST00000640605 NEFMP07197 916 aa17.71■□□□□ 0.42
KCNMA1-285ENST00000640605 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
KCNMA1-285ENST00000640605 USP35Q9P2H5 1018 aa17.7■□□□□ 0.42
KCNMA1-285ENST00000640605 KDM2AQ9Y2K7 1162 aa17.7■□□□□ 0.42
KCNMA1-285ENST00000640605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.42
KCNMA1-285ENST00000640605 BRPF3Q9ULD4 1205 aa17.67■□□□□ 0.42
KCNMA1-285ENST00000640605 LAS1LQ9Y4W2 734 aaKnown RBP17.65■□□□□ 0.42
KCNMA1-285ENST00000640605 PKNOX2Q96KN3 472 aa17.65■□□□□ 0.42
KCNMA1-285ENST00000640605 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
KCNMA1-285ENST00000640605 CARMIL1Q5VZK9 1371 aa17.64■□□□□ 0.41
KCNMA1-285ENST00000640605 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
KCNMA1-285ENST00000640605 CCDC184Q52MB2 194 aa17.61■□□□□ 0.41
KCNMA1-285ENST00000640605 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
KCNMA1-285ENST00000640605 ZBED9Q6R2W3 1325 aa17.61■□□□□ 0.41
KCNMA1-285ENST00000640605 FOXD1Q16676 465 aa17.59■□□□□ 0.41
KCNMA1-285ENST00000640605 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
KCNMA1-285ENST00000640605 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.41
KCNMA1-285ENST00000640605 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
KCNMA1-285ENST00000640605 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
KCNMA1-285ENST00000640605 GSE1Q14687 1217 aa17.54■□□□□ 0.4
KCNMA1-285ENST00000640605 NCAPD3P42695 1498 aa17.53■□□□□ 0.4
KCNMA1-285ENST00000640605 RSPH6AQ9H0K4 717 aa17.53■□□□□ 0.4
KCNMA1-285ENST00000640605 RGL3Q3MIN7 710 aa17.52■□□□□ 0.4
KCNMA1-285ENST00000640605 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.4
KCNMA1-285ENST00000640605 MRS2Q9HD23 443 aa17.51■□□□□ 0.39
KCNMA1-285ENST00000640605 AKNAQ7Z591 1439 aa17.51■□□□□ 0.39
KCNMA1-285ENST00000640605 PRXQ9BXM0 1461 aa17.49■□□□□ 0.39
KCNMA1-285ENST00000640605 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
KCNMA1-285ENST00000640605 FHAD1B1AJZ9 1412 aa17.48■□□□□ 0.39
KCNMA1-285ENST00000640605 CHGAP10645 457 aaKnown RBP17.47■□□□□ 0.39
KCNMA1-285ENST00000640605 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
KCNMA1-285ENST00000640605 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
KCNMA1-285ENST00000640605 SMG6Q86US8 1419 aaKnown RBP17.45■□□□□ 0.38
KCNMA1-285ENST00000640605 TSPY4P0CV99 314 aa17.45■□□□□ 0.38
KCNMA1-285ENST00000640605 TSPY10P0CW01 314 aa17.45■□□□□ 0.38
KCNMA1-285ENST00000640605 EIF4G2P78344 907 aaKnown RBP eCLIP17.45■□□□□ 0.38
KCNMA1-285ENST00000640605 PHLDB1Q86UU1 1377 aa17.44■□□□□ 0.38
KCNMA1-285ENST00000640605 FRAT1Q92837 279 aaPredicted RBP17.43■□□□□ 0.38
KCNMA1-285ENST00000640605 CFDP1Q9UEE9 299 aaPredicted RBP17.43■□□□□ 0.38
KCNMA1-285ENST00000640605 ARHGAP35Q9NRY4 1499 aa17.43■□□□□ 0.38
KCNMA1-285ENST00000640605 CNTLNQ9NXG0 1405 aa17.43■□□□□ 0.38
KCNMA1-285ENST00000640605 HSPA5P11021 654 aaKnown RBP17.42■□□□□ 0.38
KCNMA1-285ENST00000640605 PDE4AP27815 886 aa17.42■□□□□ 0.38
KCNMA1-285ENST00000640605 NUDCQ9Y266 331 aa17.41■□□□□ 0.38
KCNMA1-285ENST00000640605 GLIPR1L2Q4G1C9 344 aa17.41■□□□□ 0.38
KCNMA1-285ENST00000640605 FAM43AQ8N2R8 423 aa17.41■□□□□ 0.38
KCNMA1-285ENST00000640605 FHOD3Q2V2M9 1422 aa17.4■□□□□ 0.38
KCNMA1-285ENST00000640605 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
KCNMA1-285ENST00000640605 NFKBIBQ15653 356 aa17.39■□□□□ 0.37
KCNMA1-285ENST00000640605 TMC1Q8TDI8 760 aa17.39■□□□□ 0.37
KCNMA1-285ENST00000640605 NCOA2Q15596 1464 aa17.39■□□□□ 0.37
KCNMA1-285ENST00000640605 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
KCNMA1-285ENST00000640605 BACH2Q9BYV9 841 aa17.38■□□□□ 0.37
KCNMA1-285ENST00000640605 DAXXQ9UER7 740 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-285ENST00000640605 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
KCNMA1-285ENST00000640605 PLEKHD1A6NEE1 506 aa17.35■□□□□ 0.37
KCNMA1-285ENST00000640605 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
KCNMA1-285ENST00000640605 MAP3K1Q13233 1512 aa17.35■□□□□ 0.37
KCNMA1-285ENST00000640605 ZMYND15Q9H091 742 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms