RNA–Protein interactions for RNA: ENST00000640605.1

KCNMA1-285, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-285ENST00000640605 NISCHQ9Y2I1 1504 aa23.44■■□□□ 1.34
KCNMA1-285ENST00000640605 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
KCNMA1-285ENST00000640605 HRCP23327 699 aa22.18■■□□□ 1.14
KCNMA1-285ENST00000640605 SHROOM4Q9ULL8 1493 aa22.17■■□□□ 1.14
KCNMA1-285ENST00000640605 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
KCNMA1-285ENST00000640605 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
KCNMA1-285ENST00000640605 PPARGC1BQ86YN6 1023 aaKnown RBP21.68■■□□□ 1.06
KCNMA1-285ENST00000640605 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
KCNMA1-285ENST00000640605 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
KCNMA1-285ENST00000640605 MYT1Q01538 1121 aa21.23■□□□□ 0.99
KCNMA1-285ENST00000640605 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
KCNMA1-285ENST00000640605 SCAF1Q9H7N4 1312 aaKnown RBP21.18■□□□□ 0.98
KCNMA1-285ENST00000640605 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
KCNMA1-285ENST00000640605 DCAF1Q9Y4B6 1507 aa20.86■□□□□ 0.93
KCNMA1-285ENST00000640605 FAM9AQ8IZU1 332 aaPredicted RBP20.84■□□□□ 0.93
KCNMA1-285ENST00000640605 TRIM26Q12899 539 aaPredicted RBP20.75■□□□□ 0.91
KCNMA1-285ENST00000640605 ZEB1P37275 1124 aaPredicted RBP20.72■□□□□ 0.91
KCNMA1-285ENST00000640605 CCDC180Q9P1Z9 1646 aa20.65■□□□□ 0.9
KCNMA1-285ENST00000640605 ACIN1Q9UKV3 1341 aaKnown RBP20.55■□□□□ 0.88
KCNMA1-285ENST00000640605 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
KCNMA1-285ENST00000640605 TTBK1Q5TCY1 1321 aaPredicted RBP20.52■□□□□ 0.88
KCNMA1-285ENST00000640605 NEUROD1Q13562 356 aa20.47■□□□□ 0.87
KCNMA1-285ENST00000640605 GTF3C3Q9Y5Q9 886 aa20.41■□□□□ 0.86
KCNMA1-285ENST00000640605 TRIM41Q8WV44 630 aa20.27■□□□□ 0.83
KCNMA1-285ENST00000640605 CENPBP07199 599 aaPredicted RBP20.25■□□□□ 0.83
KCNMA1-285ENST00000640605 RANGAP1P46060 587 aaPredicted RBP20.18■□□□□ 0.82
KCNMA1-285ENST00000640605 DIEXFQ68CQ4 756 aaKnown RBP20.01■□□□□ 0.79
KCNMA1-285ENST00000640605 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
KCNMA1-285ENST00000640605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.82■□□□□ 0.76
KCNMA1-285ENST00000640605 CCER1Q8TC90 406 aaPredicted RBP19.81■□□□□ 0.76
KCNMA1-285ENST00000640605 BCL11AQ9H165 835 aa19.79■□□□□ 0.76
KCNMA1-285ENST00000640605 UBTFP17480 764 aaKnown RBP19.78■□□□□ 0.76
KCNMA1-285ENST00000640605 ABCC9O60706 1549 aa19.72■□□□□ 0.75
KCNMA1-285ENST00000640605 APLP2Q06481 763 aa19.71■□□□□ 0.75
KCNMA1-285ENST00000640605 YTHDC1Q96MU7 727 aaKnown RBP19.71■□□□□ 0.75
KCNMA1-285ENST00000640605 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
KCNMA1-285ENST00000640605 ANP32EQ9BTT0 268 aa19.59■□□□□ 0.73
KCNMA1-285ENST00000640605 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
KCNMA1-285ENST00000640605 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
KCNMA1-285ENST00000640605 MIER1Q8N108 512 aa19.45■□□□□ 0.7
KCNMA1-285ENST00000640605 CSRNP3Q8WYN3 585 aa19.38■□□□□ 0.69
KCNMA1-285ENST00000640605 TSHZ2Q9NRE2 1034 aa19.35■□□□□ 0.69
KCNMA1-285ENST00000640605 SUPT16HQ9Y5B9 1047 aaKnown RBP19.33■□□□□ 0.69
KCNMA1-285ENST00000640605 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.68
KCNMA1-285ENST00000640605 CLSPNQ9HAW4 1339 aa19.29■□□□□ 0.68
KCNMA1-285ENST00000640605 ITGAEP38570 1179 aa19.28■□□□□ 0.68
KCNMA1-285ENST00000640605 PRKCSHP14314 528 aaPredicted RBP19.24■□□□□ 0.67
KCNMA1-285ENST00000640605 SCRIBQ14160 1630 aa19.13■□□□□ 0.65
KCNMA1-285ENST00000640605 RSF1Q96T23 1441 aaPredicted RBP19.04■□□□□ 0.64
KCNMA1-285ENST00000640605 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
KCNMA1-285ENST00000640605 WRNQ14191 1432 aaPredicted RBP eCLIP18.97■□□□□ 0.63
KCNMA1-285ENST00000640605 RBM19Q9Y4C8 960 aaKnown RBP18.87■□□□□ 0.61
KCNMA1-285ENST00000640605 BCANQ96GW7 911 aa18.85■□□□□ 0.61
KCNMA1-285ENST00000640605 ERICH6Q7L0X2 663 aa18.85■□□□□ 0.61
KCNMA1-285ENST00000640605 CEP162Q5TB80 1403 aa18.79■□□□□ 0.6
KCNMA1-285ENST00000640605 CNGB1Q14028 1251 aaPredicted RBP18.76■□□□□ 0.59
KCNMA1-285ENST00000640605 FKBP8Q14318 412 aa18.74■□□□□ 0.59
KCNMA1-285ENST00000640605 P3H3Q8IVL6 736 aa18.74■□□□□ 0.59
KCNMA1-285ENST00000640605 MSH5O43196 834 aa18.73■□□□□ 0.59
KCNMA1-285ENST00000640605 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
KCNMA1-285ENST00000640605 FAM50AQ14320 339 aaKnown RBP18.66■□□□□ 0.58
KCNMA1-285ENST00000640605 TNIKQ9UKE5 1360 aa18.62■□□□□ 0.57
KCNMA1-285ENST00000640605 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
KCNMA1-285ENST00000640605 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
KCNMA1-285ENST00000640605 NEFLP07196 543 aa18.57■□□□□ 0.56
KCNMA1-285ENST00000640605 POLR3GLQ9BT43 218 aa18.56■□□□□ 0.56
KCNMA1-285ENST00000640605 FANCIQ9NVI1 1328 aa18.54■□□□□ 0.56
KCNMA1-285ENST00000640605 MYT1LQ9UL68 1186 aa18.54■□□□□ 0.56
KCNMA1-285ENST00000640605 ANO8Q9HCE9 1232 aaPredicted RBP18.53■□□□□ 0.56
KCNMA1-285ENST00000640605 DEKP35659 375 aaKnown RBP18.51■□□□□ 0.55
KCNMA1-285ENST00000640605 CCDC88BA6NC98 1476 aa18.44■□□□□ 0.54
KCNMA1-285ENST00000640605 DHX57Q6P158 1386 aaKnown RBP18.43■□□□□ 0.54
KCNMA1-285ENST00000640605 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
KCNMA1-285ENST00000640605 SOGA1O94964 1423 aa18.41■□□□□ 0.54
KCNMA1-285ENST00000640605 EIF4G1Q04637 1599 aaKnown RBP18.4■□□□□ 0.54
KCNMA1-285ENST00000640605 CDK11AQ9UQ88 783 aaPredicted RBP18.36■□□□□ 0.53
KCNMA1-285ENST00000640605 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
KCNMA1-285ENST00000640605 FBLN2P98095 1184 aa18.33■□□□□ 0.52
KCNMA1-285ENST00000640605 TRIM52Q96A61 297 aa18.32■□□□□ 0.52
KCNMA1-285ENST00000640605 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
KCNMA1-285ENST00000640605 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
KCNMA1-285ENST00000640605 WIZO95785 1651 aa18.31■□□□□ 0.52
KCNMA1-285ENST00000640605 EEA1Q15075 1411 aa18.31■□□□□ 0.52
KCNMA1-285ENST00000640605 ERICH6BQ5W0A0 696 aa18.29■□□□□ 0.52
KCNMA1-285ENST00000640605 RUSC2Q8N2Y8 1516 aa18.27■□□□□ 0.52
KCNMA1-285ENST00000640605 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
KCNMA1-285ENST00000640605 DDX10Q13206 875 aaKnown RBP18.25■□□□□ 0.51
KCNMA1-285ENST00000640605 CLIP1P30622 1438 aa18.23■□□□□ 0.51
KCNMA1-285ENST00000640605 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
KCNMA1-285ENST00000640605 ZNF326Q5BKZ1 582 aaKnown RBP18.21■□□□□ 0.51
KCNMA1-285ENST00000640605 NBR1Q14596 966 aa18.21■□□□□ 0.5
KCNMA1-285ENST00000640605 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
KCNMA1-285ENST00000640605 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
KCNMA1-285ENST00000640605 CCER2I3L3R5 266 aa18.16■□□□□ 0.5
KCNMA1-285ENST00000640605 NACADO15069 1562 aa18.16■□□□□ 0.5
KCNMA1-285ENST00000640605 IRX6P78412 446 aaPredicted RBP18.15■□□□□ 0.5
KCNMA1-285ENST00000640605 NOP58Q9Y2X3 529 aaKnown RBP18.14■□□□□ 0.49
KCNMA1-285ENST00000640605 UBE2Q2Q8WVN8 375 aa18.13■□□□□ 0.49
KCNMA1-285ENST00000640605 PPP1R15AO75807 674 aaPredicted RBP18.12■□□□□ 0.49
KCNMA1-285ENST00000640605 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 1855.3 ms