RNA–Protein interactions for RNA: ENST00000640353.1

KCNMA1-281, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-281ENST00000640353 FHAD1B1AJZ9 1412 aa17.05■□□□□ 0.32
KCNMA1-281ENST00000640353 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
KCNMA1-281ENST00000640353 DNMBPQ6XZF7 1577 aa17.05■□□□□ 0.32
KCNMA1-281ENST00000640353 TOPBP1Q92547 1522 aa17.04■□□□□ 0.32
KCNMA1-281ENST00000640353 POLA1P09884 1462 aaPredicted RBP17.04■□□□□ 0.32
KCNMA1-281ENST00000640353 LRRC9Q6ZRR7 1453 aa17.04■□□□□ 0.32
KCNMA1-281ENST00000640353 FAM50AQ14320 339 aaKnown RBP17.03■□□□□ 0.32
KCNMA1-281ENST00000640353 ABCA10Q8WWZ4 1543 aa17.02■□□□□ 0.32
KCNMA1-281ENST00000640353 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.31
KCNMA1-281ENST00000640353 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
KCNMA1-281ENST00000640353 FHOD3Q2V2M9 1422 aa17■□□□□ 0.31
KCNMA1-281ENST00000640353 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.31
KCNMA1-281ENST00000640353 PCF11O94913 1555 aaKnown RBP16.96■□□□□ 0.3
KCNMA1-281ENST00000640353 MYT1Q01538 1121 aa16.93■□□□□ 0.3
KCNMA1-281ENST00000640353 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
KCNMA1-281ENST00000640353 EFCAB5A4FU69 1503 aa16.9■□□□□ 0.3
KCNMA1-281ENST00000640353 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
KCNMA1-281ENST00000640353 CASKIN1Q8WXD9 1431 aa16.9■□□□□ 0.3
KCNMA1-281ENST00000640353 CUL7Q14999 1698 aa16.9■□□□□ 0.3
KCNMA1-281ENST00000640353 FYCO1Q9BQS8 1478 aa16.9■□□□□ 0.3
KCNMA1-281ENST00000640353 CFAP43Q8NDM7 1665 aa16.89■□□□□ 0.29
KCNMA1-281ENST00000640353 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
KCNMA1-281ENST00000640353 MAPKBP1O60336 1514 aa16.88■□□□□ 0.29
KCNMA1-281ENST00000640353 FMN1Q68DA7 1419 aa16.86■□□□□ 0.29
KCNMA1-281ENST00000640353 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
KCNMA1-281ENST00000640353 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
KCNMA1-281ENST00000640353 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
KCNMA1-281ENST00000640353 PDS5BQ9NTI5 1447 aa16.84■□□□□ 0.29
KCNMA1-281ENST00000640353 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.29
KCNMA1-281ENST00000640353 CTTNBP2Q8WZ74 1663 aa16.83■□□□□ 0.28
KCNMA1-281ENST00000640353 MTUS2Q5JR59 1369 aa16.82■□□□□ 0.28
KCNMA1-281ENST00000640353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.28
KCNMA1-281ENST00000640353 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
KCNMA1-281ENST00000640353 FGD6Q6ZV73 1430 aa16.78■□□□□ 0.28
KCNMA1-281ENST00000640353 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
KCNMA1-281ENST00000640353 ABCA5Q8WWZ7 1642 aa16.77■□□□□ 0.27
KCNMA1-281ENST00000640353 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
KCNMA1-281ENST00000640353 SAMD9Q5K651 1589 aa16.71■□□□□ 0.27
KCNMA1-281ENST00000640353 DDX10Q13206 875 aaKnown RBP16.7■□□□□ 0.26
KCNMA1-281ENST00000640353 PPP1R15AO75807 674 aaPredicted RBP16.69■□□□□ 0.26
KCNMA1-281ENST00000640353 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
KCNMA1-281ENST00000640353 NCOA2Q15596 1464 aa16.69■□□□□ 0.26
KCNMA1-281ENST00000640353 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
KCNMA1-281ENST00000640353 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
KCNMA1-281ENST00000640353 MYOM3Q5VTT5 1437 aa16.67■□□□□ 0.26
KCNMA1-281ENST00000640353 CCDC18Q5T9S5 1454 aa16.67■□□□□ 0.26
KCNMA1-281ENST00000640353 HIRIP3Q9BW71 556 aaPredicted RBP16.66■□□□□ 0.26
KCNMA1-281ENST00000640353 KCNH8Q96L42 1107 aa16.66■□□□□ 0.26
KCNMA1-281ENST00000640353 HFM1A2PYH4 1435 aa16.65■□□□□ 0.26
KCNMA1-281ENST00000640353 TARBP1Q13395 1621 aaKnown RBP16.65■□□□□ 0.26
KCNMA1-281ENST00000640353 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
KCNMA1-281ENST00000640353 LRRIQ1Q96JM4 1722 aa16.63■□□□□ 0.25
KCNMA1-281ENST00000640353 THOC2Q8NI27 1593 aaKnown RBP16.62■□□□□ 0.25
KCNMA1-281ENST00000640353 UACAQ9BZF9 1416 aa16.62■□□□□ 0.25
KCNMA1-281ENST00000640353 EHBP1L1Q8N3D4 1523 aa16.62■□□□□ 0.25
KCNMA1-281ENST00000640353 SUPT6HQ7KZ85 1726 aaKnown RBP16.61■□□□□ 0.25
KCNMA1-281ENST00000640353 ARID3CA6NKF2 412 aa16.61■□□□□ 0.25
KCNMA1-281ENST00000640353 NAIPQ13075 1403 aa16.61■□□□□ 0.25
KCNMA1-281ENST00000640353 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
KCNMA1-281ENST00000640353 RRP7BPQ9NSQ0 103 aa16.6■□□□□ 0.25
KCNMA1-281ENST00000640353 PTPN23Q9H3S7 1636 aa16.59■□□□□ 0.25
KCNMA1-281ENST00000640353 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
KCNMA1-281ENST00000640353 UGGT2Q9NYU1 1516 aa16.57■□□□□ 0.24
KCNMA1-281ENST00000640353 SUPT16HQ9Y5B9 1047 aaKnown RBP16.56■□□□□ 0.24
KCNMA1-281ENST00000640353 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
KCNMA1-281ENST00000640353 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
KCNMA1-281ENST00000640353 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
KCNMA1-281ENST00000640353 TRIM52Q96A61 297 aa16.54■□□□□ 0.24
KCNMA1-281ENST00000640353 EPRSP07814 1512 aaKnown RBP16.53■□□□□ 0.24
KCNMA1-281ENST00000640353 HECW1Q76N89 1606 aa16.53■□□□□ 0.24
KCNMA1-281ENST00000640353 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
KCNMA1-281ENST00000640353 ADAMTS12P58397 1594 aa16.52■□□□□ 0.24
KCNMA1-281ENST00000640353 ANP32CO43423 234 aa16.52■□□□□ 0.24
KCNMA1-281ENST00000640353 CDK13Q14004 1512 aaKnown RBP16.51■□□□□ 0.23
KCNMA1-281ENST00000640353 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
KCNMA1-281ENST00000640353 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
KCNMA1-281ENST00000640353 MIA2Q96PC5 1412 aa16.46■□□□□ 0.23
KCNMA1-281ENST00000640353 IFT140Q96RY7 1462 aa16.46■□□□□ 0.23
KCNMA1-281ENST00000640353 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
KCNMA1-281ENST00000640353 WDR62O43379 1518 aa16.45■□□□□ 0.22
KCNMA1-281ENST00000640353 MPHOSPH9Q99550 1183 aa16.43■□□□□ 0.22
KCNMA1-281ENST00000640353 KIAA0586Q9BVV6 1533 aa16.42■□□□□ 0.22
KCNMA1-281ENST00000640353 AKNAQ7Z591 1439 aa16.41■□□□□ 0.22
KCNMA1-281ENST00000640353 FOXD1Q16676 465 aa16.4■□□□□ 0.22
KCNMA1-281ENST00000640353 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
KCNMA1-281ENST00000640353 ZNF644Q9H582 1327 aaPredicted RBP16.39■□□□□ 0.21
KCNMA1-281ENST00000640353 KDM6BO15054 1643 aa16.39■□□□□ 0.21
KCNMA1-281ENST00000640353 DISP1Q96F81 1524 aa16.38■□□□□ 0.21
KCNMA1-281ENST00000640353 DENND4BO75064 1496 aaPredicted RBP16.38■□□□□ 0.21
KCNMA1-281ENST00000640353 GCC2Q8IWJ2 1684 aa16.38■□□□□ 0.21
KCNMA1-281ENST00000640353 KDM5BQ9UGL1 1544 aa16.38■□□□□ 0.21
KCNMA1-281ENST00000640353 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
KCNMA1-281ENST00000640353 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
KCNMA1-281ENST00000640353 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
KCNMA1-281ENST00000640353 KIAA0556O60303 1618 aa16.36■□□□□ 0.21
KCNMA1-281ENST00000640353 FBLN2P98095 1184 aa16.36■□□□□ 0.21
KCNMA1-281ENST00000640353 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
KCNMA1-281ENST00000640353 NUP153P49790 1475 aaKnown RBP16.36■□□□□ 0.21
KCNMA1-281ENST00000640353 DAPK1P53355 1430 aa16.35■□□□□ 0.21
KCNMA1-281ENST00000640353 BCANQ96GW7 911 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms