RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 ACIN1Q9UKV3 1341 aaKnown RBP13.87□□□□□ -0.19
NECAP1-225ENST00000640209 FHOD3Q2V2M9 1422 aa13.85□□□□□ -0.19
NECAP1-225ENST00000640209 LRRC9Q6ZRR7 1453 aa13.85□□□□□ -0.19
NECAP1-225ENST00000640209 MAP3K1Q13233 1512 aa13.85□□□□□ -0.19
NECAP1-225ENST00000640209 PCF11O94913 1555 aaKnown RBP13.85□□□□□ -0.19
NECAP1-225ENST00000640209 LAMC3Q9Y6N6 1575 aa13.84□□□□□ -0.19
NECAP1-225ENST00000640209 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.19
NECAP1-225ENST00000640209 CLSPNQ9HAW4 1339 aa13.82□□□□□ -0.2
NECAP1-225ENST00000640209 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
NECAP1-225ENST00000640209 MIER1Q8N108 512 aa13.82□□□□□ -0.2
NECAP1-225ENST00000640209 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
NECAP1-225ENST00000640209 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
NECAP1-225ENST00000640209 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
NECAP1-225ENST00000640209 CUL7Q14999 1698 aa13.8□□□□□ -0.2
NECAP1-225ENST00000640209 CFAP43Q8NDM7 1665 aa13.79□□□□□ -0.2
NECAP1-225ENST00000640209 RAB3GAP2Q9H2M9 1393 aa13.78□□□□□ -0.2
NECAP1-225ENST00000640209 CTTNBP2Q8WZ74 1663 aa13.77□□□□□ -0.21
NECAP1-225ENST00000640209 ABCA5Q8WWZ7 1642 aa13.77□□□□□ -0.21
NECAP1-225ENST00000640209 KIF21AQ7Z4S6 1674 aa13.76□□□□□ -0.21
NECAP1-225ENST00000640209 EFCAB5A4FU69 1503 aa13.76□□□□□ -0.21
NECAP1-225ENST00000640209 FAM50AQ14320 339 aaKnown RBP13.75□□□□□ -0.21
NECAP1-225ENST00000640209 PDS5BQ9NTI5 1447 aa13.75□□□□□ -0.21
NECAP1-225ENST00000640209 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
NECAP1-225ENST00000640209 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
NECAP1-225ENST00000640209 FYCO1Q9BQS8 1478 aa13.74□□□□□ -0.21
NECAP1-225ENST00000640209 CENPBP07199 599 aaPredicted RBP13.74□□□□□ -0.21
NECAP1-225ENST00000640209 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
NECAP1-225ENST00000640209 MAPKBP1O60336 1514 aa13.73□□□□□ -0.21
NECAP1-225ENST00000640209 GTF3C3Q9Y5Q9 886 aa13.71□□□□□ -0.21
NECAP1-225ENST00000640209 SETD5Q9C0A6 1442 aa13.71□□□□□ -0.21
NECAP1-225ENST00000640209 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.216e-7■■■■■ 30.6
NECAP1-225ENST00000640209 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.22
NECAP1-225ENST00000640209 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
NECAP1-225ENST00000640209 SAMD9Q5K651 1589 aa13.68□□□□□ -0.22
NECAP1-225ENST00000640209 FMN1Q68DA7 1419 aa13.67□□□□□ -0.22
NECAP1-225ENST00000640209 LRRIQ1Q96JM4 1722 aa13.67□□□□□ -0.22
NECAP1-225ENST00000640209 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
NECAP1-225ENST00000640209 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
NECAP1-225ENST00000640209 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
NECAP1-225ENST00000640209 FGD6Q6ZV73 1430 aa13.62□□□□□ -0.23
NECAP1-225ENST00000640209 MTUS2Q5JR59 1369 aa13.61□□□□□ -0.23
NECAP1-225ENST00000640209 PTPRKQ15262 1439 aa13.61□□□□□ -0.23
NECAP1-225ENST00000640209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.6□□□□□ -0.23
NECAP1-225ENST00000640209 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
NECAP1-225ENST00000640209 NCOA2Q15596 1464 aa13.58□□□□□ -0.24
NECAP1-225ENST00000640209 MRC2Q9UBG0 1479 aa13.57□□□□□ -0.24
NECAP1-225ENST00000640209 MAGI3Q5TCQ9 1506 aa13.57□□□□□ -0.24
NECAP1-225ENST00000640209 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
NECAP1-225ENST00000640209 ZNF608Q9ULD9 1512 aaPredicted RBP13.55□□□□□ -0.24
NECAP1-225ENST00000640209 MYOM3Q5VTT5 1437 aa13.54□□□□□ -0.24
NECAP1-225ENST00000640209 THOC2Q8NI27 1593 aaKnown RBP13.53□□□□□ -0.24
NECAP1-225ENST00000640209 IQGAP2Q13576 1575 aa13.52□□□□□ -0.24
NECAP1-225ENST00000640209 EHBP1L1Q8N3D4 1523 aa13.52□□□□□ -0.25
NECAP1-225ENST00000640209 SUPT6HQ7KZ85 1726 aaKnown RBP13.51□□□□□ -0.25
NECAP1-225ENST00000640209 ARID3CA6NKF2 412 aa13.51□□□□□ -0.25
NECAP1-225ENST00000640209 CCDC18Q5T9S5 1454 aa13.51□□□□□ -0.25
NECAP1-225ENST00000640209 ARHGEF11O15085 1522 aa13.51□□□□□ -0.25
NECAP1-225ENST00000640209 UGGT2Q9NYU1 1516 aa13.51□□□□□ -0.25
NECAP1-225ENST00000640209 HFM1A2PYH4 1435 aa13.5□□□□□ -0.25
NECAP1-225ENST00000640209 PTPN23Q9H3S7 1636 aa13.5□□□□□ -0.25
NECAP1-225ENST00000640209 NAIPQ13075 1403 aa13.49□□□□□ -0.25
NECAP1-225ENST00000640209 CDK13Q14004 1512 aaKnown RBP13.49□□□□□ -0.25
NECAP1-225ENST00000640209 EPRSP07814 1512 aaKnown RBP13.48□□□□□ -0.25
NECAP1-225ENST00000640209 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
NECAP1-225ENST00000640209 PPP1R15AO75807 674 aaPredicted RBP13.47□□□□□ -0.25
NECAP1-225ENST00000640209 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
NECAP1-225ENST00000640209 HECW1Q76N89 1606 aa13.46□□□□□ -0.25
NECAP1-225ENST00000640209 WDR62O43379 1518 aa13.46□□□□□ -0.25
NECAP1-225ENST00000640209 KCNH8Q96L42 1107 aa13.46□□□□□ -0.25
NECAP1-225ENST00000640209 MYT1Q01538 1121 aa13.46□□□□□ -0.26
NECAP1-225ENST00000640209 CHIC2Q9UKJ5 165 aa13.45□□□□□ -0.26
NECAP1-225ENST00000640209 UACAQ9BZF9 1416 aa13.45□□□□□ -0.26
NECAP1-225ENST00000640209 RRP7BPQ9NSQ0 103 aa13.45□□□□□ -0.26
NECAP1-225ENST00000640209 TIMELESSQ9UNS1 1208 aa13.44□□□□□ -0.26
NECAP1-225ENST00000640209 TCOF1Q13428 1488 aaKnown RBP13.43□□□□□ -0.26
NECAP1-225ENST00000640209 DISP1Q96F81 1524 aa13.42□□□□□ -0.26
NECAP1-225ENST00000640209 DDX10Q13206 875 aaKnown RBP13.42□□□□□ -0.26
NECAP1-225ENST00000640209 DAXXQ9UER7 740 aaPredicted RBP13.41□□□□□ -0.26
NECAP1-225ENST00000640209 PHF23Q9BUL5 403 aaPredicted RBP13.4□□□□□ -0.26
NECAP1-225ENST00000640209 EIF4G3O43432 1585 aaKnown RBP13.4□□□□□ -0.26
NECAP1-225ENST00000640209 KDM6BO15054 1643 aa13.4□□□□□ -0.26
NECAP1-225ENST00000640209 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
NECAP1-225ENST00000640209 KIAA0556O60303 1618 aa13.4□□□□□ -0.27
NECAP1-225ENST00000640209 DENND4BO75064 1496 aaPredicted RBP13.39□□□□□ -0.27
NECAP1-225ENST00000640209 GRIN2AQ12879 1464 aa13.39□□□□□ -0.27
NECAP1-225ENST00000640209 TONSLQ96HA7 1378 aa13.38□□□□□ -0.27
NECAP1-225ENST00000640209 PELP1Q8IZL8 1130 aaKnown RBP13.38□□□□□ -0.27
NECAP1-225ENST00000640209 KDM5BQ9UGL1 1544 aa13.37□□□□□ -0.27
NECAP1-225ENST00000640209 NUP153P49790 1475 aaKnown RBP13.37□□□□□ -0.27
NECAP1-225ENST00000640209 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
NECAP1-225ENST00000640209 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
NECAP1-225ENST00000640209 GCC2Q8IWJ2 1684 aa13.35□□□□□ -0.27
NECAP1-225ENST00000640209 ZNF644Q9H582 1327 aaPredicted RBP13.35□□□□□ -0.27
NECAP1-225ENST00000640209 TRIM52Q96A61 297 aa13.34□□□□□ -0.27
NECAP1-225ENST00000640209 CEP170Q5SW79 1584 aa13.33□□□□□ -0.28
NECAP1-225ENST00000640209 RAPGEF6Q8TEU7 1601 aa13.32□□□□□ -0.28
NECAP1-225ENST00000640209 AKNAQ7Z591 1439 aa13.32□□□□□ -0.28
NECAP1-225ENST00000640209 FOXD1Q16676 465 aa13.31□□□□□ -0.28
NECAP1-225ENST00000640209 FBLN2P98095 1184 aa13.31□□□□□ -0.28
NECAP1-225ENST00000640209 CHMP7Q8WUX9 453 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms