RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 RRBP1Q9P2E9 1410 aaKnown RBP11.2□□□□□ -0.62
NECAP1-224ENST00000640099 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
NECAP1-224ENST00000640099 PHLDB1Q86UU1 1377 aa11.19□□□□□ -0.62
NECAP1-224ENST00000640099 RAB3GAP2Q9H2M9 1393 aa11.18□□□□□ -0.62
NECAP1-224ENST00000640099 TOPBP1Q92547 1522 aa11.18□□□□□ -0.62
NECAP1-224ENST00000640099 ARID3CA6NKF2 412 aa11.18□□□□□ -0.62
NECAP1-224ENST00000640099 SIN3AQ96ST3 1273 aa11.17□□□□□ -0.62
NECAP1-224ENST00000640099 PRDM2Q13029 1718 aa11.16□□□□□ -0.62
NECAP1-224ENST00000640099 TIAM1Q13009 1591 aa11.14□□□□□ -0.63
NECAP1-224ENST00000640099 LRRC9Q6ZRR7 1453 aa11.14□□□□□ -0.63
NECAP1-224ENST00000640099 HIRIP3Q9BW71 556 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-224ENST00000640099 SENP3Q9H4L4 574 aaPredicted RBP11.13□□□□□ -0.63
NECAP1-224ENST00000640099 DNMBPQ6XZF7 1577 aa11.13□□□□□ -0.63
NECAP1-224ENST00000640099 URB2Q14146 1524 aaKnown RBP11.12□□□□□ -0.63
NECAP1-224ENST00000640099 CLSPNQ9HAW4 1339 aa11.12□□□□□ -0.63
NECAP1-224ENST00000640099 FHAD1B1AJZ9 1412 aa11.12□□□□□ -0.63
NECAP1-224ENST00000640099 PCF11O94913 1555 aaKnown RBP11.12□□□□□ -0.63
NECAP1-224ENST00000640099 ABCA10Q8WWZ4 1543 aa11.12□□□□□ -0.63
NECAP1-224ENST00000640099 SETD5Q9C0A6 1442 aa11.09□□□□□ -0.63
NECAP1-224ENST00000640099 MTUS2Q5JR59 1369 aa11.07□□□□□ -0.64
NECAP1-224ENST00000640099 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
NECAP1-224ENST00000640099 CHIC2Q9UKJ5 165 aa11.06□□□□□ -0.64
NECAP1-224ENST00000640099 GAPVD1Q14C86 1478 aa11.05□□□□□ -0.64
NECAP1-224ENST00000640099 PDS5BQ9NTI5 1447 aa11.04□□□□□ -0.64
NECAP1-224ENST00000640099 DDX10Q13206 875 aaKnown RBP11.04□□□□□ -0.64
NECAP1-224ENST00000640099 MAPKBP1O60336 1514 aa11.04□□□□□ -0.64
NECAP1-224ENST00000640099 CASKIN1Q8WXD9 1431 aa11.03□□□□□ -0.64
NECAP1-224ENST00000640099 AQRO60306 1485 aaKnown RBP eCLIP11.02□□□□□ -0.646e-7■■■■■ 30.6
NECAP1-224ENST00000640099 RRP7BPQ9NSQ0 103 aa11.01□□□□□ -0.65
NECAP1-224ENST00000640099 MAP3K1Q13233 1512 aa11.01□□□□□ -0.65
NECAP1-224ENST00000640099 FYCO1Q9BQS8 1478 aa11.01□□□□□ -0.65
NECAP1-224ENST00000640099 LAMC3Q9Y6N6 1575 aa11.01□□□□□ -0.65
NECAP1-224ENST00000640099 FMN1Q68DA7 1419 aa11.01□□□□□ -0.65
NECAP1-224ENST00000640099 CUL7Q14999 1698 aa10.98□□□□□ -0.65
NECAP1-224ENST00000640099 FGD6Q6ZV73 1430 aa10.98□□□□□ -0.65
NECAP1-224ENST00000640099 PTPRKQ15262 1439 aa10.98□□□□□ -0.65
NECAP1-224ENST00000640099 CFAP43Q8NDM7 1665 aa10.98□□□□□ -0.65
NECAP1-224ENST00000640099 EFCAB5A4FU69 1503 aa10.98□□□□□ -0.65
NECAP1-224ENST00000640099 WDR97A6NE52 1622 aa10.98□□□□□ -0.65
NECAP1-224ENST00000640099 KIF21AQ7Z4S6 1674 aa10.97□□□□□ -0.65
NECAP1-224ENST00000640099 TRIM52Q96A61 297 aa10.97□□□□□ -0.65
NECAP1-224ENST00000640099 SNAPC4Q5SXM2 1469 aa10.96□□□□□ -0.65
NECAP1-224ENST00000640099 CTTNBP2Q8WZ74 1663 aa10.96□□□□□ -0.65
NECAP1-224ENST00000640099 FBLN2P98095 1184 aa10.96□□□□□ -0.66
NECAP1-224ENST00000640099 PELP1Q8IZL8 1130 aaKnown RBP10.95□□□□□ -0.66
NECAP1-224ENST00000640099 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
NECAP1-224ENST00000640099 ABCA5Q8WWZ7 1642 aa10.94□□□□□ -0.66
NECAP1-224ENST00000640099 PPP1R15AO75807 674 aaPredicted RBP10.94□□□□□ -0.66
NECAP1-224ENST00000640099 TONSLQ96HA7 1378 aa10.93□□□□□ -0.66
NECAP1-224ENST00000640099 FOXD1Q16676 465 aa10.93□□□□□ -0.66
NECAP1-224ENST00000640099 CCDC18Q5T9S5 1454 aa10.92□□□□□ -0.66
NECAP1-224ENST00000640099 ZNF608Q9ULD9 1512 aaPredicted RBP10.91□□□□□ -0.66
NECAP1-224ENST00000640099 GRIN2BQ13224 1484 aa10.91□□□□□ -0.66
NECAP1-224ENST00000640099 MYOM3Q5VTT5 1437 aa10.9□□□□□ -0.66
NECAP1-224ENST00000640099 CDK13Q14004 1512 aaKnown RBP10.9□□□□□ -0.66
NECAP1-224ENST00000640099 MAGI3Q5TCQ9 1506 aa10.89□□□□□ -0.67
NECAP1-224ENST00000640099 TARBP1Q13395 1621 aaKnown RBP10.89□□□□□ -0.67
NECAP1-224ENST00000640099 LRRIQ1Q96JM4 1722 aa10.88□□□□□ -0.67
NECAP1-224ENST00000640099 BCANQ96GW7 911 aa10.88□□□□□ -0.67
NECAP1-224ENST00000640099 SAMD9Q5K651 1589 aa10.88□□□□□ -0.67
NECAP1-224ENST00000640099 ZNF644Q9H582 1327 aaPredicted RBP10.88□□□□□ -0.67
NECAP1-224ENST00000640099 NAIPQ13075 1403 aa10.88□□□□□ -0.67
NECAP1-224ENST00000640099 ZNF777Q9ULD5 760 aaPredicted RBP10.86□□□□□ -0.67
NECAP1-224ENST00000640099 HFM1A2PYH4 1435 aa10.86□□□□□ -0.67
NECAP1-224ENST00000640099 SUPT16HQ9Y5B9 1047 aaKnown RBP10.86□□□□□ -0.67
NECAP1-224ENST00000640099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.86□□□□□ -0.67
NECAP1-224ENST00000640099 MRC2Q9UBG0 1479 aa10.85□□□□□ -0.67
NECAP1-224ENST00000640099 CHMP7Q8WUX9 453 aaPredicted RBP10.84□□□□□ -0.67
NECAP1-224ENST00000640099 UACAQ9BZF9 1416 aa10.84□□□□□ -0.67
NECAP1-224ENST00000640099 PTPN23Q9H3S7 1636 aa10.84□□□□□ -0.67
NECAP1-224ENST00000640099 ANP32CO43423 234 aa10.84□□□□□ -0.67
NECAP1-224ENST00000640099 IQGAP2Q13576 1575 aa10.83□□□□□ -0.68
NECAP1-224ENST00000640099 EPRSP07814 1512 aaKnown RBP10.83□□□□□ -0.68
NECAP1-224ENST00000640099 EHBP1L1Q8N3D4 1523 aa10.83□□□□□ -0.68
NECAP1-224ENST00000640099 SUPT6HQ7KZ85 1726 aaKnown RBP10.83□□□□□ -0.68
NECAP1-224ENST00000640099 CNGB1Q14028 1251 aaPredicted RBP10.83□□□□□ -0.68
NECAP1-224ENST00000640099 PHF23Q9BUL5 403 aaPredicted RBP10.83□□□□□ -0.68
NECAP1-224ENST00000640099 TIMELESSQ9UNS1 1208 aa10.82□□□□□ -0.68
NECAP1-224ENST00000640099 ERCC6Q03468 1493 aa10.82□□□□□ -0.68
NECAP1-224ENST00000640099 PBRM1Q86U86 1689 aa10.81□□□□□ -0.68
NECAP1-224ENST00000640099 THOC2Q8NI27 1593 aaKnown RBP10.81□□□□□ -0.68
NECAP1-224ENST00000640099 UGGT2Q9NYU1 1516 aa10.81□□□□□ -0.68
NECAP1-224ENST00000640099 MPHOSPH9Q99550 1183 aa10.81□□□□□ -0.68
NECAP1-224ENST00000640099 ADAMTS12P58397 1594 aa10.81□□□□□ -0.68
NECAP1-224ENST00000640099 HSPA5P11021 654 aaKnown RBP10.79□□□□□ -0.68
NECAP1-224ENST00000640099 KDM6BO15054 1643 aa10.79□□□□□ -0.68
NECAP1-224ENST00000640099 L3MBTL2Q969R5 705 aa10.78□□□□□ -0.68
NECAP1-224ENST00000640099 HECW1Q76N89 1606 aa10.78□□□□□ -0.68
NECAP1-224ENST00000640099 FKBP8Q14318 412 aa10.78□□□□□ -0.68
NECAP1-224ENST00000640099 ZNF326Q5BKZ1 582 aaKnown RBP10.77□□□□□ -0.69
NECAP1-224ENST00000640099 SLC4A1APQ9BWU0 796 aaKnown RBP10.77□□□□□ -0.69
NECAP1-224ENST00000640099 IFT140Q96RY7 1462 aa10.77□□□□□ -0.69
NECAP1-224ENST00000640099 PRG4Q92954 1404 aaPredicted RBP10.76□□□□□ -0.69
NECAP1-224ENST00000640099 POLR3GLQ9BT43 218 aa10.76□□□□□ -0.69
NECAP1-224ENST00000640099 CFDP1Q9UEE9 299 aaPredicted RBP10.76□□□□□ -0.69
NECAP1-224ENST00000640099 WDR62O43379 1518 aa10.76□□□□□ -0.69
NECAP1-224ENST00000640099 CDK11AQ9UQ88 783 aaPredicted RBP10.76□□□□□ -0.69
NECAP1-224ENST00000640099 DISP1Q96F81 1524 aa10.75□□□□□ -0.69
NECAP1-224ENST00000640099 ARHGEF11O15085 1522 aa10.74□□□□□ -0.69
NECAP1-224ENST00000640099 PLB1Q6P1J6 1458 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms