RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
KCNMA1-228ENST00000638223 NEFLP07196 543 aa13.94□□□□□ -0.18
KCNMA1-228ENST00000638223 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
KCNMA1-228ENST00000638223 PRDM2Q13029 1718 aa13.92□□□□□ -0.18
KCNMA1-228ENST00000638223 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
KCNMA1-228ENST00000638223 DIEXFQ68CQ4 756 aaKnown RBP13.91□□□□□ -0.18
KCNMA1-228ENST00000638223 ARID4BQ4LE39 1312 aaPredicted RBP13.87□□□□□ -0.19
KCNMA1-228ENST00000638223 TONSLQ96HA7 1378 aa13.86□□□□□ -0.19
KCNMA1-228ENST00000638223 KDM2AQ9Y2K7 1162 aa13.85□□□□□ -0.19
KCNMA1-228ENST00000638223 JPH4Q96JJ6 628 aa13.84□□□□□ -0.19
KCNMA1-228ENST00000638223 NESP48681 1621 aa13.83□□□□□ -0.2
KCNMA1-228ENST00000638223 CARMIL2Q6F5E8 1435 aa13.81□□□□□ -0.2
KCNMA1-228ENST00000638223 RUSC2Q8N2Y8 1516 aa13.81□□□□□ -0.2
KCNMA1-228ENST00000638223 FHAD1B1AJZ9 1412 aa13.8□□□□□ -0.2
KCNMA1-228ENST00000638223 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
KCNMA1-228ENST00000638223 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.2
KCNMA1-228ENST00000638223 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
KCNMA1-228ENST00000638223 RGL3Q3MIN7 710 aa13.77□□□□□ -0.21
KCNMA1-228ENST00000638223 CYB5RLQ6IPT4 315 aa13.76□□□□□ -0.21
KCNMA1-228ENST00000638223 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
KCNMA1-228ENST00000638223 KANK4Q5T7N3 995 aaPredicted RBP13.76□□□□□ -0.21
KCNMA1-228ENST00000638223 ANP32CO43423 234 aa13.76□□□□□ -0.21
KCNMA1-228ENST00000638223 RAPGEF2Q9Y4G8 1499 aa13.75□□□□□ -0.21
KCNMA1-228ENST00000638223 MLECQ14165 292 aa13.75□□□□□ -0.21
KCNMA1-228ENST00000638223 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
KCNMA1-228ENST00000638223 FHOD3Q2V2M9 1422 aa13.73□□□□□ -0.21
KCNMA1-228ENST00000638223 AQRO60306 1485 aaKnown RBP eCLIP13.72□□□□□ -0.21
KCNMA1-228ENST00000638223 HIRIP3Q9BW71 556 aaPredicted RBP13.71□□□□□ -0.22
KCNMA1-228ENST00000638223 VPS8Q8N3P4 1428 aa13.69□□□□□ -0.22
KCNMA1-228ENST00000638223 PPP1R15AO75807 674 aaPredicted RBP13.69□□□□□ -0.22
KCNMA1-228ENST00000638223 GAPVD1Q14C86 1478 aa13.69□□□□□ -0.22
KCNMA1-228ENST00000638223 IGF1RP08069 1367 aa13.68□□□□□ -0.22
KCNMA1-228ENST00000638223 CFTRP13569 1480 aa13.68□□□□□ -0.22
KCNMA1-228ENST00000638223 SLC24A1O60721 1099 aa13.66□□□□□ -0.22
KCNMA1-228ENST00000638223 FMN1Q68DA7 1419 aa13.66□□□□□ -0.22
KCNMA1-228ENST00000638223 DDX10Q13206 875 aaKnown RBP13.65□□□□□ -0.22
KCNMA1-228ENST00000638223 GGT6Q6P531 493 aa13.65□□□□□ -0.22
KCNMA1-228ENST00000638223 EFCAB2Q5VUJ9 269 aa13.64□□□□□ -0.23
KCNMA1-228ENST00000638223 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
KCNMA1-228ENST00000638223 PTPRGP23470 1445 aa13.62□□□□□ -0.23
KCNMA1-228ENST00000638223 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
KCNMA1-228ENST00000638223 SIN3AQ96ST3 1273 aa13.61□□□□□ -0.23
KCNMA1-228ENST00000638223 KIF21AQ7Z4S6 1674 aa13.6□□□□□ -0.23
KCNMA1-228ENST00000638223 C14orf37Q86TY3 774 aa13.58□□□□□ -0.23
KCNMA1-228ENST00000638223 HNRNPMP52272 730 aaKnown RBP eCLIP13.58□□□□□ -0.24
KCNMA1-228ENST00000638223 NEFMP07197 916 aa13.57□□□□□ -0.24
KCNMA1-228ENST00000638223 ARHGAP35Q9NRY4 1499 aa13.56□□□□□ -0.24
KCNMA1-228ENST00000638223 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
KCNMA1-228ENST00000638223 BIVM-ERCC5R4GMW8 1640 aa13.55□□□□□ -0.24
KCNMA1-228ENST00000638223 SCAF1Q9H7N4 1312 aaKnown RBP13.55□□□□□ -0.24
KCNMA1-228ENST00000638223 ERICH6Q7L0X2 663 aa13.54□□□□□ -0.24
KCNMA1-228ENST00000638223 TOPBP1Q92547 1522 aa13.53□□□□□ -0.24
KCNMA1-228ENST00000638223 FOXD1Q16676 465 aa13.53□□□□□ -0.24
KCNMA1-228ENST00000638223 EIF4G2P78344 907 aaKnown RBP eCLIP13.53□□□□□ -0.24
KCNMA1-228ENST00000638223 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
KCNMA1-228ENST00000638223 GRIN2BQ13224 1484 aa13.51□□□□□ -0.25
KCNMA1-228ENST00000638223 KIF3BO15066 747 aa13.51□□□□□ -0.25
KCNMA1-228ENST00000638223 POLA1P09884 1462 aaPredicted RBP13.5□□□□□ -0.25
KCNMA1-228ENST00000638223 SALL2Q9Y467 1007 aaPredicted RBP13.5□□□□□ -0.25
KCNMA1-228ENST00000638223 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
KCNMA1-228ENST00000638223 PKD2Q13563 968 aa13.49□□□□□ -0.25
KCNMA1-228ENST00000638223 SPAG9O60271 1321 aaKnown RBP13.48□□□□□ -0.25
KCNMA1-228ENST00000638223 THOC2Q8NI27 1593 aaKnown RBP13.48□□□□□ -0.25
KCNMA1-228ENST00000638223 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
KCNMA1-228ENST00000638223 CARD11Q9BXL7 1154 aa13.48□□□□□ -0.25
KCNMA1-228ENST00000638223 KANK1Q14678 1352 aa13.47□□□□□ -0.25
KCNMA1-228ENST00000638223 BCL11AQ9H165 835 aa13.47□□□□□ -0.25
KCNMA1-228ENST00000638223 DCAF11Q8TEB1 546 aa13.47□□□□□ -0.25
KCNMA1-228ENST00000638223 CUX1P39880 1505 aa13.46□□□□□ -0.25
KCNMA1-228ENST00000638223 WDR97A6NE52 1622 aa13.46□□□□□ -0.25
KCNMA1-228ENST00000638223 ACIN1Q9UKV3 1341 aaKnown RBP13.46□□□□□ -0.26
KCNMA1-228ENST00000638223 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
KCNMA1-228ENST00000638223 FAM69CQ0P6D2 419 aa13.45□□□□□ -0.26
KCNMA1-228ENST00000638223 TOP2BQ02880 1626 aa13.45□□□□□ -0.26
KCNMA1-228ENST00000638223 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
KCNMA1-228ENST00000638223 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
KCNMA1-228ENST00000638223 NUP155O75694 1391 aa13.44□□□□□ -0.26
KCNMA1-228ENST00000638223 CLSPNQ9HAW4 1339 aa13.43□□□□□ -0.26
KCNMA1-228ENST00000638223 POGKQ9P215 609 aa13.43□□□□□ -0.26
KCNMA1-228ENST00000638223 ANKRD30AQ9BXX3 1397 aa13.42□□□□□ -0.26
KCNMA1-228ENST00000638223 SETD5Q9C0A6 1442 aa13.42□□□□□ -0.26
KCNMA1-228ENST00000638223 CANXP27824 592 aaKnown RBP13.41□□□□□ -0.26
KCNMA1-228ENST00000638223 SAFB2Q14151 953 aaKnown RBP eCLIP13.4□□□□□ -0.26
KCNMA1-228ENST00000638223 PRG4Q92954 1404 aaPredicted RBP13.4□□□□□ -0.26
KCNMA1-228ENST00000638223 SNAPC4Q5SXM2 1469 aa13.39□□□□□ -0.27
KCNMA1-228ENST00000638223 HNRNPUQ00839 825 aaKnown RBP eCLIP13.39□□□□□ -0.27
KCNMA1-228ENST00000638223 MPHOSPH9Q99550 1183 aa13.39□□□□□ -0.27
KCNMA1-228ENST00000638223 LMOD2Q6P5Q4 547 aa13.39□□□□□ -0.27
KCNMA1-228ENST00000638223 MRS2Q9HD23 443 aa13.38□□□□□ -0.27
KCNMA1-228ENST00000638223 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
KCNMA1-228ENST00000638223 WASHC2CQ9Y4E1 1318 aa13.38□□□□□ -0.27
KCNMA1-228ENST00000638223 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
KCNMA1-228ENST00000638223 RSPH4AQ5TD94 716 aa13.37□□□□□ -0.27
KCNMA1-228ENST00000638223 A0A0G2JS52 829 aa13.37□□□□□ -0.27
KCNMA1-228ENST00000638223 STK26Q9P289 416 aa13.37□□□□□ -0.27
KCNMA1-228ENST00000638223 URB2Q14146 1524 aaKnown RBP13.37□□□□□ -0.27
KCNMA1-228ENST00000638223 WDR62O43379 1518 aa13.36□□□□□ -0.27
KCNMA1-228ENST00000638223 SENP3-EIF4A1A0A087X0R7 540 aa13.36□□□□□ -0.27
KCNMA1-228ENST00000638223 DNMBPQ6XZF7 1577 aa13.36□□□□□ -0.27
KCNMA1-228ENST00000638223 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms