RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 ANP32EQ9BTT0 268 aa20.51■□□□□ 0.87
PTBP1-221ENST00000635647 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
PTBP1-221ENST00000635647 ARHGAP35Q9NRY4 1499 aa20.47■□□□□ 0.87
PTBP1-221ENST00000635647 IGF1RP08069 1367 aa20.47■□□□□ 0.87
PTBP1-221ENST00000635647 ERICH3Q5RHP9 1530 aa20.46■□□□□ 0.87
PTBP1-221ENST00000635647 SUPT16HQ9Y5B9 1047 aaKnown RBP20.45■□□□□ 0.86
PTBP1-221ENST00000635647 ZNF326Q5BKZ1 582 aaKnown RBP20.42■□□□□ 0.86
PTBP1-221ENST00000635647 FBLN2P98095 1184 aa20.41■□□□□ 0.86
PTBP1-221ENST00000635647 CFTRP13569 1480 aa20.4■□□□□ 0.86
PTBP1-221ENST00000635647 SENP3-EIF4A1A0A087X0R7 540 aa20.4■□□□□ 0.86
PTBP1-221ENST00000635647 CADPSQ9ULU8 1353 aa20.4■□□□□ 0.86
PTBP1-221ENST00000635647 ANP32CO43423 234 aa20.39■□□□□ 0.85
PTBP1-221ENST00000635647 SETD5Q9C0A6 1442 aa20.39■□□□□ 0.85
PTBP1-221ENST00000635647 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
PTBP1-221ENST00000635647 FKBP8Q14318 412 aa20.38■□□□□ 0.85
PTBP1-221ENST00000635647 FHOD3Q2V2M9 1422 aa20.37■□□□□ 0.85
PTBP1-221ENST00000635647 PHLDB1Q86UU1 1377 aa20.35■□□□□ 0.85
PTBP1-221ENST00000635647 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
PTBP1-221ENST00000635647 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
PTBP1-221ENST00000635647 MTUS2Q5JR59 1369 aa20.33■□□□□ 0.85
PTBP1-221ENST00000635647 TONSLQ96HA7 1378 aa20.33■□□□□ 0.85
PTBP1-221ENST00000635647 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
PTBP1-221ENST00000635647 TSHZ2Q9NRE2 1034 aa20.3■□□□□ 0.84
PTBP1-221ENST00000635647 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
PTBP1-221ENST00000635647 IRX6P78412 446 aaPredicted RBP20.29■□□□□ 0.84
PTBP1-221ENST00000635647 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
PTBP1-221ENST00000635647 RAD54L2Q9Y4B4 1467 aa20.28■□□□□ 0.84
PTBP1-221ENST00000635647 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
PTBP1-221ENST00000635647 TDRD9Q8NDG6 1382 aaKnown RBP20.24■□□□□ 0.83
PTBP1-221ENST00000635647 LRRC9Q6ZRR7 1453 aa20.23■□□□□ 0.83
PTBP1-221ENST00000635647 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
PTBP1-221ENST00000635647 PPP1R15AO75807 674 aaPredicted RBP20.19■□□□□ 0.82
PTBP1-221ENST00000635647 TIAM1Q13009 1591 aa20.16■□□□□ 0.82
PTBP1-221ENST00000635647 HNRNPUQ00839 825 aaKnown RBP eCLIP20.16■□□□□ 0.82
PTBP1-221ENST00000635647 NESP48681 1621 aa20.13■□□□□ 0.81
PTBP1-221ENST00000635647 FAM9BQ8IZU0 186 aa20.13■□□□□ 0.81
PTBP1-221ENST00000635647 FOXD1Q16676 465 aa20.12■□□□□ 0.81
PTBP1-221ENST00000635647 WDR97A6NE52 1622 aa20.11■□□□□ 0.81
PTBP1-221ENST00000635647 MAPKBP1O60336 1514 aa20.07■□□□□ 0.8
PTBP1-221ENST00000635647 PCF11O94913 1555 aaKnown RBP20.04■□□□□ 0.8
PTBP1-221ENST00000635647 TIMELESSQ9UNS1 1208 aa20.04■□□□□ 0.8
PTBP1-221ENST00000635647 FMN1Q68DA7 1419 aa20.03■□□□□ 0.8
PTBP1-221ENST00000635647 SALL2Q9Y467 1007 aaPredicted RBP20.01■□□□□ 0.79
PTBP1-221ENST00000635647 DNAJC5BQ9UF47 199 aa20.01■□□□□ 0.79
PTBP1-221ENST00000635647 MYT1LQ9UL68 1186 aa20.01■□□□□ 0.79
PTBP1-221ENST00000635647 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
PTBP1-221ENST00000635647 CC2D2AQ9P2K1 1620 aa20■□□□□ 0.79
PTBP1-221ENST00000635647 FGD6Q6ZV73 1430 aa19.99■□□□□ 0.79
PTBP1-221ENST00000635647 CCDC18Q5T9S5 1454 aa19.98■□□□□ 0.79
PTBP1-221ENST00000635647 RBM19Q9Y4C8 960 aaKnown RBP19.97■□□□□ 0.79
PTBP1-221ENST00000635647 HSPA5P11021 654 aaKnown RBP19.97■□□□□ 0.79
PTBP1-221ENST00000635647 CASKIN1Q8WXD9 1431 aa19.97■□□□□ 0.79
PTBP1-221ENST00000635647 TOPBP1Q92547 1522 aa19.96■□□□□ 0.79
PTBP1-221ENST00000635647 EIF4G2P78344 907 aaKnown RBP eCLIP19.96■□□□□ 0.791e-7■□□□□ 8.1
PTBP1-221ENST00000635647 CCER2I3L3R5 266 aa19.95■□□□□ 0.78
PTBP1-221ENST00000635647 KDM2AQ9Y2K7 1162 aa19.95■□□□□ 0.78
PTBP1-221ENST00000635647 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
PTBP1-221ENST00000635647 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
PTBP1-221ENST00000635647 MAP3K1Q13233 1512 aa19.9■□□□□ 0.78
PTBP1-221ENST00000635647 NBR1Q14596 966 aa19.89■□□□□ 0.78
PTBP1-221ENST00000635647 MRS2Q9HD23 443 aa19.89■□□□□ 0.77
PTBP1-221ENST00000635647 MPHOSPH9Q99550 1183 aa19.88■□□□□ 0.77
PTBP1-221ENST00000635647 L3MBTL2Q969R5 705 aa19.87■□□□□ 0.77
PTBP1-221ENST00000635647 GAPVD1Q14C86 1478 aa19.87■□□□□ 0.77
PTBP1-221ENST00000635647 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
PTBP1-221ENST00000635647 PTPRKQ15262 1439 aa19.86■□□□□ 0.77
PTBP1-221ENST00000635647 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
PTBP1-221ENST00000635647 DNMBPQ6XZF7 1577 aa19.85■□□□□ 0.77
PTBP1-221ENST00000635647 CDK11AQ9UQ88 783 aaPredicted RBP19.84■□□□□ 0.77
PTBP1-221ENST00000635647 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
PTBP1-221ENST00000635647 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
PTBP1-221ENST00000635647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.761e-7■■□□□ 14.5
PTBP1-221ENST00000635647 PDS5BQ9NTI5 1447 aa19.8■□□□□ 0.76
PTBP1-221ENST00000635647 EFCAB5A4FU69 1503 aa19.8■□□□□ 0.76
PTBP1-221ENST00000635647 ZNF644Q9H582 1327 aaPredicted RBP19.79■□□□□ 0.76
PTBP1-221ENST00000635647 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
PTBP1-221ENST00000635647 NAIPQ13075 1403 aa19.78■□□□□ 0.76
PTBP1-221ENST00000635647 WASHC2AQ641Q2 1341 aa19.78■□□□□ 0.76
PTBP1-221ENST00000635647 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
PTBP1-221ENST00000635647 PRKCSHP14314 528 aaPredicted RBP19.77■□□□□ 0.76
PTBP1-221ENST00000635647 AQRO60306 1485 aaKnown RBP eCLIP19.77■□□□□ 0.753e-8■■■■■ 33.8
PTBP1-221ENST00000635647 RGL3Q3MIN7 710 aa19.75■□□□□ 0.75
PTBP1-221ENST00000635647 CCDC184Q52MB2 194 aa19.75■□□□□ 0.75
PTBP1-221ENST00000635647 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
PTBP1-221ENST00000635647 CFDP1Q9UEE9 299 aaPredicted RBP19.74■□□□□ 0.75
PTBP1-221ENST00000635647 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
PTBP1-221ENST00000635647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.72■□□□□ 0.753e-7■■■□□ 16.4
PTBP1-221ENST00000635647 RTN4Q9NQC3 1192 aaKnown RBP19.72■□□□□ 0.75
PTBP1-221ENST00000635647 CFAP43Q8NDM7 1665 aa19.72■□□□□ 0.75
PTBP1-221ENST00000635647 B4GALNT3Q6L9W6 998 aa19.7■□□□□ 0.74
PTBP1-221ENST00000635647 PRDM2Q13029 1718 aa19.69■□□□□ 0.74
PTBP1-221ENST00000635647 C11orf95C9JLR9 678 aaPredicted RBP19.68■□□□□ 0.74
PTBP1-221ENST00000635647 SLC24A1O60721 1099 aa19.67■□□□□ 0.74
PTBP1-221ENST00000635647 DEKP35659 375 aaKnown RBP19.67■□□□□ 0.74
PTBP1-221ENST00000635647 RTL5Q5HYW3 569 aaPredicted RBP19.67■□□□□ 0.74
PTBP1-221ENST00000635647 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
PTBP1-221ENST00000635647 NBPF8Q3BBV2 869 aa19.65■□□□□ 0.74
PTBP1-221ENST00000635647 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
PTBP1-221ENST00000635647 CUL7Q14999 1698 aa19.65■□□□□ 0.74
PTBP1-221ENST00000635647 CDK13Q14004 1512 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms