RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-238ENST00000635273 POTEGQ6S5H5 508 aa15.42■□□□□ 0.06
SMARCA2-238ENST00000635273 OTUD5Q96G74 571 aa15.42■□□□□ 0.06
SMARCA2-238ENST00000635273 PCDH10Q9P2E7 1040 aa15.42■□□□□ 0.06
SMARCA2-238ENST00000635273 PLCD3Q8N3E9 789 aa15.35■□□□□ 0.05
SMARCA2-238ENST00000635273 ZRANB1Q9UGI0 708 aa15.35■□□□□ 0.05
SMARCA2-238ENST00000635273 MIER1Q8N108 512 aa15.3■□□□□ 0.04
SMARCA2-238ENST00000635273 ECM2O94769 699 aaPredicted RBP15.28■□□□□ 0.04
SMARCA2-238ENST00000635273 HAP1P54257 671 aaPredicted RBP15.28■□□□□ 0.04
SMARCA2-238ENST00000635273 GALR2O43603 387 aaPredicted RBP15.23■□□□□ 0.03
SMARCA2-238ENST00000635273 POTEB2H3BUK9 544 aa15.21■□□□□ 0.03
SMARCA2-238ENST00000635273 PAK3O75914 559 aaPredicted RBP15.17■□□□□ 0.02
SMARCA2-238ENST00000635273 BBXQ8WY36 941 aaPredicted RBP15.15■□□□□ 0.02
SMARCA2-238ENST00000635273 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
SMARCA2-238ENST00000635273 RGL2O15211 777 aa15.13■□□□□ 0.01
SMARCA2-238ENST00000635273 PLEKHG5O94827 1062 aa15.12■□□□□ 0.01
SMARCA2-238ENST00000635273 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
SMARCA2-238ENST00000635273 ZBTB47Q9UFB7 747 aaPredicted RBP15.11■□□□□ 0.01
SMARCA2-238ENST00000635273 MAMSTRQ6ZN01 415 aa15.09■□□□□ 0.01
SMARCA2-238ENST00000635273 VSIG10Q8N0Z9 540 aa15.07■□□□□ 0
SMARCA2-238ENST00000635273 CIZ1Q9ULV3 898 aaPredicted RBP15.07■□□□□ 0
SMARCA2-238ENST00000635273 PAXIP1Q6ZW49 1069 aaPredicted RBP15.02■□□□□ -0
SMARCA2-238ENST00000635273 CREBZFQ9NS37 354 aa15.02■□□□□ -0
SMARCA2-238ENST00000635273 METRNQ9UJH8 293 aa15□□□□□ -0.01
SMARCA2-238ENST00000635273 SLC39A7Q92504 469 aa14.99□□□□□ -0.01
SMARCA2-238ENST00000635273 PHF12Q96QT6 1004 aa14.98□□□□□ -0.01
SMARCA2-238ENST00000635273 C7P10643 843 aa14.97□□□□□ -0.01
SMARCA2-238ENST00000635273 CFAP44Q96MT7 982 aa14.97□□□□□ -0.01
SMARCA2-238ENST00000635273 PELP1Q8IZL8 1130 aaKnown RBP14.95□□□□□ -0.02
SMARCA2-238ENST00000635273 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
SMARCA2-238ENST00000635273 BCANQ96GW7 911 aa14.93□□□□□ -0.02
SMARCA2-238ENST00000635273 SCUBE2Q9NQ36 999 aa14.93□□□□□ -0.02
SMARCA2-238ENST00000635273 FAM163AQ96GL9 167 aaPredicted RBP14.92□□□□□ -0.02
SMARCA2-238ENST00000635273 CHGAP10645 457 aaKnown RBP14.91□□□□□ -0.02
SMARCA2-238ENST00000635273 KDM2AQ9Y2K7 1162 aa14.91□□□□□ -0.02
SMARCA2-238ENST00000635273 ASTLQ6HA08 431 aaPredicted RBP14.9□□□□□ -0.02
SMARCA2-238ENST00000635273 SPRYD3Q8NCJ5 442 aa14.9□□□□□ -0.02
SMARCA2-238ENST00000635273 GSE1Q14687 1217 aa14.86□□□□□ -0.03
SMARCA2-238ENST00000635273 NUBP1P53384 320 aa14.85□□□□□ -0.03
SMARCA2-238ENST00000635273 LCE2DQ5TA82 110 aaPredicted RBP14.84□□□□□ -0.03
SMARCA2-238ENST00000635273 ATMINO43313 823 aaPredicted RBP14.83□□□□□ -0.04
SMARCA2-238ENST00000635273 POTEJP0CG39 1038 aa14.81□□□□□ -0.04
SMARCA2-238ENST00000635273 TSHZ2Q9NRE2 1034 aa14.8□□□□□ -0.04
SMARCA2-238ENST00000635273 HS6ST3Q8IZP7 471 aa14.79□□□□□ -0.04
SMARCA2-238ENST00000635273 RNF25Q96BH1 459 aaPredicted RBP14.79□□□□□ -0.04
SMARCA2-238ENST00000635273 MS4A3Q96HJ5 214 aa14.78□□□□□ -0.04
SMARCA2-238ENST00000635273 DCAF8Q5TAQ9 597 aa14.76□□□□□ -0.05
SMARCA2-238ENST00000635273 MNX1P50219 401 aaPredicted RBP14.71□□□□□ -0.05
SMARCA2-238ENST00000635273 TAOK2Q9UL54 1235 aa14.7□□□□□ -0.06
SMARCA2-238ENST00000635273 CDAN1Q8IWY9 1227 aa14.69□□□□□ -0.06
SMARCA2-238ENST00000635273 DNAJC5Q9H3Z4 198 aa14.69□□□□□ -0.06
SMARCA2-238ENST00000635273 RIOK3O14730 519 aaKnown RBP14.68□□□□□ -0.06
SMARCA2-238ENST00000635273 PRKCSHP14314 528 aaPredicted RBP14.67□□□□□ -0.06
SMARCA2-238ENST00000635273 FAM212AQ96EL1 285 aa14.67□□□□□ -0.06
SMARCA2-238ENST00000635273 CHRM1P11229 460 aaPredicted RBP14.6□□□□□ -0.07
SMARCA2-238ENST00000635273 ATN1P54259 1190 aaPredicted RBP14.6□□□□□ -0.07
SMARCA2-238ENST00000635273 RASEFQ8IZ41 740 aa14.6□□□□□ -0.07
SMARCA2-238ENST00000635273 NKX1-1Q15270 411 aaPredicted RBP14.59□□□□□ -0.07
SMARCA2-238ENST00000635273 VGFO15240 615 aaPredicted RBP14.57□□□□□ -0.08
SMARCA2-238ENST00000635273 STK25O00506 426 aa14.54□□□□□ -0.08
SMARCA2-238ENST00000635273 GTPBP6O43824 516 aaPredicted RBP14.52□□□□□ -0.09
SMARCA2-238ENST00000635273 SGIP1Q9BQI5 828 aa14.5□□□□□ -0.09
SMARCA2-238ENST00000635273 TPRNQ4KMQ1 711 aa14.49□□□□□ -0.09
SMARCA2-238ENST00000635273 POTEFA5A3E0 1075 aa14.47□□□□□ -0.09
SMARCA2-238ENST00000635273 SEC24BO95487 1268 aa14.47□□□□□ -0.09
SMARCA2-238ENST00000635273 TSPYL2Q9H2G4 693 aaPredicted RBP14.47□□□□□ -0.09
SMARCA2-238ENST00000635273 PYGBP11216 843 aa14.46□□□□□ -0.09
SMARCA2-238ENST00000635273 BMP2KQ9NSY1 1161 aaPredicted RBP14.46□□□□□ -0.09
SMARCA2-238ENST00000635273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.45□□□□□ -0.1
SMARCA2-238ENST00000635273 ZFP91Q96JP5 570 aaPredicted RBP14.45□□□□□ -0.1
SMARCA2-238ENST00000635273 TIE1P35590 1138 aa14.44□□□□□ -0.1
SMARCA2-238ENST00000635273 BCL11BQ9C0K0 894 aaPredicted RBP14.43□□□□□ -0.1
SMARCA2-238ENST00000635273 STK24Q9Y6E0 443 aa14.43□□□□□ -0.1
SMARCA2-238ENST00000635273 CCDC61Q9Y6R9 512 aa14.42□□□□□ -0.1
SMARCA2-238ENST00000635273 MMRN1Q13201 1228 aa14.41□□□□□ -0.1
SMARCA2-238ENST00000635273 KIF12Q96FN5 646 aa14.4□□□□□ -0.1
SMARCA2-238ENST00000635273 NBR1Q14596 966 aa14.38□□□□□ -0.11
SMARCA2-238ENST00000635273 ST18O60284 1047 aa14.35□□□□□ -0.11
SMARCA2-238ENST00000635273 SLAIN1Q8ND83 568 aa14.34□□□□□ -0.11
SMARCA2-238ENST00000635273 RYDENQ9NUL5 291 aaKnown RBP14.34□□□□□ -0.11
SMARCA2-238ENST00000635273 SPNS2Q8IVW8 549 aa14.33□□□□□ -0.12
SMARCA2-238ENST00000635273 IER5LQ5T953 404 aa14.32□□□□□ -0.12
SMARCA2-238ENST00000635273 COLQQ9Y215 455 aaPredicted RBP14.32□□□□□ -0.12
SMARCA2-238ENST00000635273 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
SMARCA2-238ENST00000635273 ZNF467Q7Z7K2 595 aaPredicted RBP14.27□□□□□ -0.13
SMARCA2-238ENST00000635273 TMEM121BQ9BXQ6 578 aaPredicted RBP14.27□□□□□ -0.13
SMARCA2-238ENST00000635273 TTLL13PA6NNM8 815 aa14.26□□□□□ -0.13
SMARCA2-238ENST00000635273 MAP3K13O43283 966 aa14.26□□□□□ -0.13
SMARCA2-238ENST00000635273 PDAP1Q13442 181 aaKnown RBP14.21□□□□□ -0.13
SMARCA2-238ENST00000635273 TRIM35Q9UPQ4 493 aa14.21□□□□□ -0.13
SMARCA2-238ENST00000635273 PCDHB8Q9UN66 801 aa14.19□□□□□ -0.14
SMARCA2-238ENST00000635273 PCDHB13Q9Y5F0 798 aa14.19□□□□□ -0.14
SMARCA2-238ENST00000635273 SNPHO15079 494 aa14.17□□□□□ -0.14
SMARCA2-238ENST00000635273 PLCG2P16885 1265 aa14.13□□□□□ -0.15
SMARCA2-238ENST00000635273 PSEN1P49768 467 aa14.12□□□□□ -0.15
SMARCA2-238ENST00000635273 CADPS2Q86UW7 1296 aa14.09□□□□□ -0.15
SMARCA2-238ENST00000635273 MFRPQ9BY79 579 aa14.07□□□□□ -0.16
SMARCA2-238ENST00000635273 P3H3Q8IVL6 736 aa14.05□□□□□ -0.16
SMARCA2-238ENST00000635273 IFNL1Q8IU54 200 aa14.02□□□□□ -0.17
SMARCA2-238ENST00000635273 WDR70Q9NW82 654 aa14.02□□□□□ -0.17
SMARCA2-238ENST00000635273 MARVELD3Q96A59 401 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms